RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 AEBP2Q6ZN18 517 aaPredicted RBP10.01□□□□□ -0.81
SEC23A-202ENST00000537403 CHIC1Q5VXU3 224 aa9.65□□□□□ -0.86
SEC23A-202ENST00000537403 NISCHQ9Y2I1 1504 aa8.87□□□□□ -0.99
SEC23A-202ENST00000537403 PHF23Q9BUL5 403 aaPredicted RBP8.67□□□□□ -1.02
SEC23A-202ENST00000537403 SENP3Q9H4L4 574 aaPredicted RBP8.22□□□□□ -1.09
SEC23A-202ENST00000537403 CCDC180Q9P1Z9 1646 aa8.22□□□□□ -1.09
SEC23A-202ENST00000537403 PLPPR3Q6T4P5 718 aa7.84□□□□□ -1.15
SEC23A-202ENST00000537403 FOXD1Q16676 465 aa7.81□□□□□ -1.16
SEC23A-202ENST00000537403 ABCC9O60706 1549 aa7.73□□□□□ -1.17
SEC23A-202ENST00000537403 PPP6R1Q9UPN7 881 aa7.72□□□□□ -1.17
SEC23A-202ENST00000537403 UNC13AQ9UPW8 1703 aa7.7□□□□□ -1.18
SEC23A-202ENST00000537403 ADRA2BP18089 450 aa7.69□□□□□ -1.18
SEC23A-202ENST00000537403 MYO15BQ96JP2 1530 aa7.67□□□□□ -1.18
SEC23A-202ENST00000537403 NACADO15069 1562 aa7.6□□□□□ -1.19
SEC23A-202ENST00000537403 RB1CC1Q8TDY2 1594 aa7.6□□□□□ -1.19
SEC23A-202ENST00000537403 BICRAQ9NZM4 1560 aa7.54□□□□□ -1.2
SEC23A-202ENST00000537403 DCAF1Q9Y4B6 1507 aa7.53□□□□□ -1.2
SEC23A-202ENST00000537403 SHROOM4Q9ULL8 1493 aa7.49□□□□□ -1.21
SEC23A-202ENST00000537403 ZCCHC6Q5VYS8 1495 aaKnown RBP7.42□□□□□ -1.22
SEC23A-202ENST00000537403 PIAS4Q8N2W9 510 aaPredicted RBP7.39□□□□□ -1.23
SEC23A-202ENST00000537403 DNAJC5BQ9UF47 199 aa7.31□□□□□ -1.24
SEC23A-202ENST00000537403 DCAF8L2P0C7V8 631 aa7.27□□□□□ -1.25
SEC23A-202ENST00000537403 CC2D2AQ9P2K1 1620 aa7.22□□□□□ -1.25
SEC23A-202ENST00000537403 EIF4G1Q04637 1599 aaKnown RBP7.22□□□□□ -1.25
SEC23A-202ENST00000537403 SCRIBQ14160 1630 aa7.15□□□□□ -1.26
SEC23A-202ENST00000537403 KCNA4P22459 653 aa7.1□□□□□ -1.27
SEC23A-202ENST00000537403 PEG3Q9GZU2 1588 aa7.08□□□□□ -1.28
SEC23A-202ENST00000537403 CECR2Q9BXF3 1484 aa7.04□□□□□ -1.28
SEC23A-202ENST00000537403 HMGXB3Q12766 1538 aa7.02□□□□□ -1.29
SEC23A-202ENST00000537403 PABPN1Q86U42 306 aaKnown RBP eCLIP7.01□□□□□ -1.29
SEC23A-202ENST00000537403 MAPK8IP2Q13387 824 aaPredicted RBP7□□□□□ -1.29
SEC23A-202ENST00000537403 PPP4R3CPQ6ZMV5 832 aa7□□□□□ -1.29
SEC23A-202ENST00000537403 SMARCA4P51532 1647 aa6.98□□□□□ -1.29
SEC23A-202ENST00000537403 NCAPD3P42695 1498 aa6.97□□□□□ -1.29
SEC23A-202ENST00000537403 SMARCA2P51531 1590 aa6.96□□□□□ -1.29
SEC23A-202ENST00000537403 THOC2Q8NI27 1593 aaKnown RBP6.95□□□□□ -1.3
SEC23A-202ENST00000537403 MSH5O43196 834 aa6.92□□□□□ -1.3
SEC23A-202ENST00000537403 CUX2O14529 1486 aa6.91□□□□□ -1.3
SEC23A-202ENST00000537403 PRDM2Q13029 1718 aa6.89□□□□□ -1.31
SEC23A-202ENST00000537403 ATAD2BQ9ULI0 1458 aa6.89□□□□□ -1.31
SEC23A-202ENST00000537403 BAZ1AQ9NRL2 1556 aaPredicted RBP6.87□□□□□ -1.31
SEC23A-202ENST00000537403 LAMC3Q9Y6N6 1575 aa6.86□□□□□ -1.31
SEC23A-202ENST00000537403 KIF21AQ7Z4S6 1674 aa6.86□□□□□ -1.31
SEC23A-202ENST00000537403 SUPT5HO00267 1087 aaKnown RBP6.83□□□□□ -1.32
SEC23A-202ENST00000537403 EHMT2Q96KQ7 1210 aa6.83□□□□□ -1.32
SEC23A-202ENST00000537403 NPM3O75607 178 aaKnown RBP6.8□□□□□ -1.32
SEC23A-202ENST00000537403 WDR62O43379 1518 aa6.79□□□□□ -1.32
SEC23A-202ENST00000537403 MROH2BQ7Z745 1585 aa6.79□□□□□ -1.32
SEC23A-202ENST00000537403 WIZO95785 1651 aa6.74□□□□□ -1.33
SEC23A-202ENST00000537403 NESP48681 1621 aa6.73□□□□□ -1.33
SEC23A-202ENST00000537403 BAZ1BQ9UIG0 1483 aaKnown RBP6.72□□□□□ -1.33
SEC23A-202ENST00000537403 DNAJC5Q9H3Z4 198 aa6.71□□□□□ -1.34
SEC23A-202ENST00000537403 TOP2AP11388 1531 aaKnown RBP6.69□□□□□ -1.34
SEC23A-202ENST00000537403 SCAF1Q9H7N4 1312 aaKnown RBP6.68□□□□□ -1.34
SEC23A-202ENST00000537403 CNKSR2Q8WXI2 1034 aa6.67□□□□□ -1.34
SEC23A-202ENST00000537403 CFTRP13569 1480 aa6.66□□□□□ -1.34
SEC23A-202ENST00000537403 NCBP3Q53F19 620 aaKnown RBP6.65□□□□□ -1.34
SEC23A-202ENST00000537403 SLC4A1APQ9BWU0 796 aaKnown RBP6.65□□□□□ -1.35
SEC23A-202ENST00000537403 MRC2Q9UBG0 1479 aa6.65□□□□□ -1.35
SEC23A-202ENST00000537403 WDR97A6NE52 1622 aa6.63□□□□□ -1.35
SEC23A-202ENST00000537403 CADPSQ9ULU8 1353 aa6.61□□□□□ -1.35
SEC23A-202ENST00000537403 TARBP1Q13395 1621 aaKnown RBP6.61□□□□□ -1.35
SEC23A-202ENST00000537403 ERCC6Q03468 1493 aa6.6□□□□□ -1.35
SEC23A-202ENST00000537403 URB2Q14146 1524 aaKnown RBP6.6□□□□□ -1.35
SEC23A-202ENST00000537403 PDS5BQ9NTI5 1447 aa6.59□□□□□ -1.35
SEC23A-202ENST00000537403 ZBTB22O15209 634 aa6.59□□□□□ -1.35
SEC23A-202ENST00000537403 DMRT2Q9Y5R5 561 aa6.59□□□□□ -1.35
SEC23A-202ENST00000537403 RSF1Q96T23 1441 aaPredicted RBP6.59□□□□□ -1.35
SEC23A-202ENST00000537403 DCAF8L1A6NGE4 600 aa6.56□□□□□ -1.36
SEC23A-202ENST00000537403 CEP164Q9UPV0 1460 aa6.55□□□□□ -1.36
SEC23A-202ENST00000537403 CSRNP3Q8WYN3 585 aa6.55□□□□□ -1.36
SEC23A-202ENST00000537403 FANCD2Q9BXW9 1451 aa6.55□□□□□ -1.36
SEC23A-202ENST00000537403 EIF4G3O43432 1585 aaKnown RBP6.54□□□□□ -1.36
SEC23A-202ENST00000537403 DNMBPQ6XZF7 1577 aa6.53□□□□□ -1.36
SEC23A-202ENST00000537403 CHD1O14646 1710 aa6.52□□□□□ -1.37
SEC23A-202ENST00000537403 RIMBP3CA6NJZ7 1639 aa6.51□□□□□ -1.37
SEC23A-202ENST00000537403 RIMBP3BA6NNM3 1639 aa6.51□□□□□ -1.37
SEC23A-202ENST00000537403 RIMBP3Q9UFD9 1639 aa6.51□□□□□ -1.37
SEC23A-202ENST00000537403 RNF216Q9NWF9 866 aaPredicted RBP6.5□□□□□ -1.37
SEC23A-202ENST00000537403 CLASP1Q7Z460 1538 aa6.5□□□□□ -1.37
SEC23A-202ENST00000537403 CCDC88BA6NC98 1476 aa6.5□□□□□ -1.37
SEC23A-202ENST00000537403 TOPBP1Q92547 1522 aa6.49□□□□□ -1.37
SEC23A-202ENST00000537403 PBRM1Q86U86 1689 aa6.48□□□□□ -1.37
SEC23A-202ENST00000537403 IFT140Q96RY7 1462 aa6.48□□□□□ -1.37
SEC23A-202ENST00000537403 ABCA5Q8WWZ7 1642 aa6.48□□□□□ -1.37
SEC23A-202ENST00000537403 ABCC8Q09428 1581 aa6.47□□□□□ -1.37
SEC23A-202ENST00000537403 HOXD11P31277 338 aaPredicted RBP6.47□□□□□ -1.37
SEC23A-202ENST00000537403 BIVM-ERCC5R4GMW8 1640 aa6.46□□□□□ -1.37
SEC23A-202ENST00000537403 SHROOM2Q13796 1616 aa6.45□□□□□ -1.38
SEC23A-202ENST00000537403 FAM9AQ8IZU1 332 aaPredicted RBP6.44□□□□□ -1.38
SEC23A-202ENST00000537403 SLC4A2P04920 1241 aa6.43□□□□□ -1.38
SEC23A-202ENST00000537403 ZNF608Q9ULD9 1512 aaPredicted RBP6.43□□□□□ -1.38
SEC23A-202ENST00000537403 APLP2Q06481 763 aa6.41□□□□□ -1.38
SEC23A-202ENST00000537403 CUX1P39880 1505 aa6.41□□□□□ -1.38
SEC23A-202ENST00000537403 POLA1P09884 1462 aaPredicted RBP6.4□□□□□ -1.38
SEC23A-202ENST00000537403 ARHGEF11O15085 1522 aa6.4□□□□□ -1.38
SEC23A-202ENST00000537403 TOP2BQ02880 1626 aa6.36□□□□□ -1.39
SEC23A-202ENST00000537403 POTEDQ86YR6 584 aa6.36□□□□□ -1.39
SEC23A-202ENST00000537403 ARAP1Q96P48 1450 aa6.35□□□□□ -1.39
SEC23A-202ENST00000537403 MAGI1Q96QZ7 1491 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms