RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 SHANK2Q9UPX8 1470 aa14.41□□□□□ -0.1
CTNNA1-221ENST00000520339 ERVK-7P63135 1459 aa14.4□□□□□ -0.1
CTNNA1-221ENST00000520339 SOCS7O14512 581 aa14.4□□□□□ -0.1
CTNNA1-221ENST00000520339 BBXQ8WY36 941 aaPredicted RBP14.4□□□□□ -0.1
CTNNA1-221ENST00000520339 RNF17Q9BXT8 1623 aaKnown RBP14.4□□□□□ -0.1
CTNNA1-221ENST00000520339 ERBINQ96RT1 1412 aa14.4□□□□□ -0.1
CTNNA1-221ENST00000520339 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.39□□□□□ -0.11
CTNNA1-221ENST00000520339 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
CTNNA1-221ENST00000520339 ARHGAP31Q2M1Z3 1444 aa14.38□□□□□ -0.11
CTNNA1-221ENST00000520339 SPATA31D1Q6ZQQ2 1576 aa14.38□□□□□ -0.11
CTNNA1-221ENST00000520339 UGGT1Q9NYU2 1555 aa14.38□□□□□ -0.11
CTNNA1-221ENST00000520339 MROH1Q8NDA8 1641 aa14.37□□□□□ -0.11
CTNNA1-221ENST00000520339 NPHP4O75161 1426 aaPredicted RBP14.37□□□□□ -0.11
CTNNA1-221ENST00000520339 MED14O60244 1454 aa14.37□□□□□ -0.11
CTNNA1-221ENST00000520339 PTPN23Q9H3S7 1636 aa14.37□□□□□ -0.11
CTNNA1-221ENST00000520339 NEURL4Q96JN8 1562 aa14.36□□□□□ -0.11
CTNNA1-221ENST00000520339 ILDR2Q71H61 639 aa14.36□□□□□ -0.11
CTNNA1-221ENST00000520339 EIF2AK4Q9P2K8 1649 aaKnown RBP14.36□□□□□ -0.11
CTNNA1-221ENST00000520339 FAM50AQ14320 339 aaKnown RBP14.35□□□□□ -0.11
CTNNA1-221ENST00000520339 LTKP29376 864 aa14.34□□□□□ -0.11
CTNNA1-221ENST00000520339 KANK1Q14678 1352 aa14.34□□□□□ -0.11
CTNNA1-221ENST00000520339 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
CTNNA1-221ENST00000520339 NUBP1P53384 320 aa14.33□□□□□ -0.12
CTNNA1-221ENST00000520339 GSE1Q14687 1217 aa14.33□□□□□ -0.12
CTNNA1-221ENST00000520339 TXNDC2Q86VQ3 553 aa14.33□□□□□ -0.12
CTNNA1-221ENST00000520339 CREBZFQ9NS37 354 aa14.33□□□□□ -0.12
CTNNA1-221ENST00000520339 TOM1O60784 492 aa14.32□□□□□ -0.12
CTNNA1-221ENST00000520339 IDI1Q13907 227 aa14.32□□□□□ -0.12
CTNNA1-221ENST00000520339 CPS1P31327 1500 aa14.31□□□□□ -0.12
CTNNA1-221ENST00000520339 PRDM15P57071 1507 aaPredicted RBP14.31□□□□□ -0.12
CTNNA1-221ENST00000520339 ZC3H13Q5T200 1668 aaKnown RBP14.3□□□□□ -0.12
CTNNA1-221ENST00000520339 DCAF8Q5TAQ9 597 aa14.3□□□□□ -0.12
CTNNA1-221ENST00000520339 PAXIP1Q6ZW49 1069 aaPredicted RBP14.3□□□□□ -0.12
CTNNA1-221ENST00000520339 ADGRL2O95490 1459 aa14.3□□□□□ -0.12
CTNNA1-221ENST00000520339 VWDEQ8N2E2 1590 aa14.3□□□□□ -0.12
CTNNA1-221ENST00000520339 CHGAP10645 457 aaKnown RBP14.29□□□□□ -0.12
CTNNA1-221ENST00000520339 EID1Q9Y6B2 187 aa14.29□□□□□ -0.12
CTNNA1-221ENST00000520339 ARHGAP23Q9P227 1491 aa14.29□□□□□ -0.12
CTNNA1-221ENST00000520339 LMTK2Q8IWU2 1503 aa14.29□□□□□ -0.12
CTNNA1-221ENST00000520339 DEPDC5O75140 1603 aa14.29□□□□□ -0.12
CTNNA1-221ENST00000520339 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
CTNNA1-221ENST00000520339 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
CTNNA1-221ENST00000520339 SCAF11Q99590 1463 aaKnown RBP14.28□□□□□ -0.12
CTNNA1-221ENST00000520339 TMEM2Q9UHN6 1383 aa14.28□□□□□ -0.12
CTNNA1-221ENST00000520339 ANKRD50Q9ULJ7 1429 aa14.28□□□□□ -0.12
CTNNA1-221ENST00000520339 HSPA1LP34931 641 aa14.27□□□□□ -0.13
CTNNA1-221ENST00000520339 NOS1P29475 1434 aa14.26□□□□□ -0.13
CTNNA1-221ENST00000520339 SLC52A1Q9NWF4 448 aa14.26□□□□□ -0.13
CTNNA1-221ENST00000520339 SLIT1O75093 1534 aa14.25□□□□□ -0.13
CTNNA1-221ENST00000520339 CROCC2H7BZ55 1655 aa14.25□□□□□ -0.13
CTNNA1-221ENST00000520339 PITPNM1O00562 1244 aa14.24□□□□□ -0.13
CTNNA1-221ENST00000520339 CEP152O94986 1710 aa14.24□□□□□ -0.13
CTNNA1-221ENST00000520339 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
CTNNA1-221ENST00000520339 LRRC7Q96NW7 1537 aa14.23□□□□□ -0.13
CTNNA1-221ENST00000520339 POLR1AO95602 1720 aaPredicted RBP14.23□□□□□ -0.13
CTNNA1-221ENST00000520339 ROCK1Q13464 1354 aa14.22□□□□□ -0.13
CTNNA1-221ENST00000520339 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.13
CTNNA1-221ENST00000520339 FAM212AQ96EL1 285 aa14.21□□□□□ -0.13
CTNNA1-221ENST00000520339 IQGAP1P46940 1657 aa14.2□□□□□ -0.14
CTNNA1-221ENST00000520339 KCNA6P17658 529 aa14.2□□□□□ -0.14
CTNNA1-221ENST00000520339 VSIG10Q8N0Z9 540 aa14.2□□□□□ -0.14
CTNNA1-221ENST00000520339 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
CTNNA1-221ENST00000520339 UBR1Q8IWV7 1749 aa14.2□□□□□ -0.14
CTNNA1-221ENST00000520339 SLC26A8Q96RN1 970 aa14.19□□□□□ -0.14
CTNNA1-221ENST00000520339 EFCAB6Q5THR3 1501 aa14.19□□□□□ -0.14
CTNNA1-221ENST00000520339 RPRD2Q5VT52 1461 aaKnown RBP14.18□□□□□ -0.14
CTNNA1-221ENST00000520339 RNF25Q96BH1 459 aaPredicted RBP14.18□□□□□ -0.14
CTNNA1-221ENST00000520339 ALKQ9UM73 1620 aa14.18□□□□□ -0.14
CTNNA1-221ENST00000520339 SYNMO15061 1565 aa14.17□□□□□ -0.14
CTNNA1-221ENST00000520339 ITGAEP38570 1179 aa14.17□□□□□ -0.14
CTNNA1-221ENST00000520339 PIK3C2BO00750 1634 aa14.16□□□□□ -0.14
CTNNA1-221ENST00000520339 CFAP65Q6ZU64 1925 aaKnown RBP14.16□□□□□ -0.14
CTNNA1-221ENST00000520339 NUP155O75694 1391 aa14.15□□□□□ -0.14
CTNNA1-221ENST00000520339 HDGFP51858 240 aaKnown RBP14.15□□□□□ -0.14
CTNNA1-221ENST00000520339 RASEFQ8IZ41 740 aa14.15□□□□□ -0.14
CTNNA1-221ENST00000520339 TMEM94Q12767 1356 aa14.14□□□□□ -0.15
CTNNA1-221ENST00000520339 PROSER2Q86WR7 435 aaPredicted RBP14.14□□□□□ -0.15
CTNNA1-221ENST00000520339 BCANQ96GW7 911 aa14.14□□□□□ -0.15
CTNNA1-221ENST00000520339 HS6ST3Q8IZP7 471 aa14.13□□□□□ -0.15
CTNNA1-221ENST00000520339 ADGRB3O60242 1522 aa14.13□□□□□ -0.15
CTNNA1-221ENST00000520339 ZFYVE9O95405 1425 aa14.13□□□□□ -0.15
CTNNA1-221ENST00000520339 TET3O43151 1660 aa14.13□□□□□ -0.15
CTNNA1-221ENST00000520339 PLEKHG1Q9ULL1 1385 aa14.12□□□□□ -0.15
CTNNA1-221ENST00000520339 STRCP1A6NGW2 1772 aa14.12□□□□□ -0.15
CTNNA1-221ENST00000520339 RIOK3O14730 519 aaKnown RBP14.12□□□□□ -0.15
CTNNA1-221ENST00000520339 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.12□□□□□ -0.15
CTNNA1-221ENST00000520339 RBM33Q96EV2 1170 aaKnown RBP14.12□□□□□ -0.15
CTNNA1-221ENST00000520339 TBX22Q9Y458 520 aa14.12□□□□□ -0.15
CTNNA1-221ENST00000520339 RIMS2Q9UQ26 1411 aa14.12□□□□□ -0.15
CTNNA1-221ENST00000520339 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
CTNNA1-221ENST00000520339 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
CTNNA1-221ENST00000520339 KDM5AP29375 1690 aaKnown RBP14.1□□□□□ -0.15
CTNNA1-221ENST00000520339 FAM135BQ49AJ0 1406 aa14.09□□□□□ -0.15
CTNNA1-221ENST00000520339 NUTM2DQ5VT03 806 aaPredicted RBP14.09□□□□□ -0.15
CTNNA1-221ENST00000520339 UNC13BO14795 1591 aa14.08□□□□□ -0.16
CTNNA1-221ENST00000520339 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
CTNNA1-221ENST00000520339 RRBP1Q9P2E9 1410 aaKnown RBP14.07□□□□□ -0.16
CTNNA1-221ENST00000520339 CHADLQ6NUI6 762 aa14.06□□□□□ -0.16
CTNNA1-221ENST00000520339 CHRM1P11229 460 aaPredicted RBP14.05□□□□□ -0.16
CTNNA1-221ENST00000520339 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms