RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 NLRP1Q9C000 1473 aa16.7■□□□□ 0.26
UBE2D3-232ENST00000514755 UGGT1Q9NYU2 1555 aa16.68■□□□□ 0.26
UBE2D3-232ENST00000514755 PLA2R1Q13018 1463 aa16.68■□□□□ 0.26
UBE2D3-232ENST00000514755 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
UBE2D3-232ENST00000514755 GCC2Q8IWJ2 1684 aa16.68■□□□□ 0.26
UBE2D3-232ENST00000514755 TET3O43151 1660 aa16.67■□□□□ 0.26
UBE2D3-232ENST00000514755 SYNMO15061 1565 aa16.67■□□□□ 0.26
UBE2D3-232ENST00000514755 IQGAP3Q86VI3 1631 aa16.67■□□□□ 0.26
UBE2D3-232ENST00000514755 NUP155O75694 1391 aa16.66■□□□□ 0.26
UBE2D3-232ENST00000514755 NOS1P29475 1434 aa16.66■□□□□ 0.26
UBE2D3-232ENST00000514755 HFM1A2PYH4 1435 aa16.65■□□□□ 0.26
UBE2D3-232ENST00000514755 PTPRTO14522 1441 aa16.65■□□□□ 0.26
UBE2D3-232ENST00000514755 E9PCH4 1651 aa16.65■□□□□ 0.26
UBE2D3-232ENST00000514755 IFNLR1Q8IU57 520 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-232ENST00000514755 UBR1Q8IWV7 1749 aa16.64■□□□□ 0.25
UBE2D3-232ENST00000514755 PIK3C2BO00750 1634 aa16.63■□□□□ 0.25
UBE2D3-232ENST00000514755 IDI1Q13907 227 aa16.63■□□□□ 0.25
UBE2D3-232ENST00000514755 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-232ENST00000514755 NEURL4Q96JN8 1562 aa16.63■□□□□ 0.25
UBE2D3-232ENST00000514755 RPRD2Q5VT52 1461 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-232ENST00000514755 PKD2Q13563 968 aa16.62■□□□□ 0.25
UBE2D3-232ENST00000514755 POLR1AO95602 1720 aaPredicted RBP16.61■□□□□ 0.25
UBE2D3-232ENST00000514755 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
UBE2D3-232ENST00000514755 PLCD3Q8N3E9 789 aa16.6■□□□□ 0.25
UBE2D3-232ENST00000514755 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.24
UBE2D3-232ENST00000514755 MIER1Q8N108 512 aa16.58■□□□□ 0.24
UBE2D3-232ENST00000514755 ARHGAP23Q9P227 1491 aa16.56■□□□□ 0.24
UBE2D3-232ENST00000514755 LTKP29376 864 aa16.56■□□□□ 0.24
UBE2D3-232ENST00000514755 AMER1Q5JTC6 1135 aaPredicted RBP16.56■□□□□ 0.24
UBE2D3-232ENST00000514755 SLIT1O75093 1534 aa16.55■□□□□ 0.24
UBE2D3-232ENST00000514755 ZNF335Q9H4Z2 1342 aaPredicted RBP16.55■□□□□ 0.24
UBE2D3-232ENST00000514755 TRIM52Q96A61 297 aa16.55■□□□□ 0.24
UBE2D3-232ENST00000514755 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
UBE2D3-232ENST00000514755 LTBP4Q8N2S1 1624 aa16.55■□□□□ 0.24
UBE2D3-232ENST00000514755 ADGRB3O60242 1522 aa16.55■□□□□ 0.24
UBE2D3-232ENST00000514755 MED14O60244 1454 aa16.54■□□□□ 0.24
UBE2D3-232ENST00000514755 NPHP4O75161 1426 aaPredicted RBP16.54■□□□□ 0.24
UBE2D3-232ENST00000514755 TMEM2Q9UHN6 1383 aa16.53■□□□□ 0.24
UBE2D3-232ENST00000514755 KDM5AP29375 1690 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-232ENST00000514755 ILDR1Q86SU0 546 aaPredicted RBP16.53■□□□□ 0.24
UBE2D3-232ENST00000514755 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
UBE2D3-232ENST00000514755 MYO5BQ9ULV0 1848 aa16.53■□□□□ 0.24
UBE2D3-232ENST00000514755 TXNDC2Q86VQ3 553 aa16.52■□□□□ 0.24
UBE2D3-232ENST00000514755 SCAF11Q99590 1463 aaKnown RBP16.52■□□□□ 0.23
UBE2D3-232ENST00000514755 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.23
UBE2D3-232ENST00000514755 SPHKAPQ2M3C7 1700 aa16.51■□□□□ 0.23
UBE2D3-232ENST00000514755 IQGAP1P46940 1657 aa16.51■□□□□ 0.23
UBE2D3-232ENST00000514755 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
UBE2D3-232ENST00000514755 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
UBE2D3-232ENST00000514755 SETD5Q9C0A6 1442 aa16.49■□□□□ 0.23
UBE2D3-232ENST00000514755 RTN4Q9NQC3 1192 aaKnown RBP16.49■□□□□ 0.23
UBE2D3-232ENST00000514755 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
UBE2D3-232ENST00000514755 ZFYVE9O95405 1425 aa16.46■□□□□ 0.23
UBE2D3-232ENST00000514755 CLTCL1P53675 1640 aa16.46■□□□□ 0.23
UBE2D3-232ENST00000514755 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-232ENST00000514755 EID1Q9Y6B2 187 aa16.46■□□□□ 0.23
UBE2D3-232ENST00000514755 RAB3GAP2Q9H2M9 1393 aa16.46■□□□□ 0.23
UBE2D3-232ENST00000514755 TRPM2O94759 1503 aa16.45■□□□□ 0.22
UBE2D3-232ENST00000514755 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-232ENST00000514755 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
UBE2D3-232ENST00000514755 FBXO41Q8TF61 875 aa16.45■□□□□ 0.22
UBE2D3-232ENST00000514755 RIMS2Q9UQ26 1411 aa16.45■□□□□ 0.22
UBE2D3-232ENST00000514755 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
UBE2D3-232ENST00000514755 MPHOSPH9Q99550 1183 aa16.44■□□□□ 0.22
UBE2D3-232ENST00000514755 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
UBE2D3-232ENST00000514755 SPOCK2Q92563 424 aa16.41■□□□□ 0.22
UBE2D3-232ENST00000514755 SLC26A8Q96RN1 970 aa16.41■□□□□ 0.22
UBE2D3-232ENST00000514755 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBE2D3-232ENST00000514755 CPS1P31327 1500 aa16.38■□□□□ 0.21
UBE2D3-232ENST00000514755 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
UBE2D3-232ENST00000514755 PPP1R15AO75807 674 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-232ENST00000514755 KIF1BO60333 1816 aa16.37■□□□□ 0.21
UBE2D3-232ENST00000514755 IQSEC2Q5JU85 1478 aa16.36■□□□□ 0.21
UBE2D3-232ENST00000514755 MNX1P50219 401 aaPredicted RBP16.36■□□□□ 0.21
UBE2D3-232ENST00000514755 ZNF326Q5BKZ1 582 aaKnown RBP16.36■□□□□ 0.21
UBE2D3-232ENST00000514755 BCANQ96GW7 911 aa16.36■□□□□ 0.21
UBE2D3-232ENST00000514755 NEXMIFQ5QGS0 1516 aa16.35■□□□□ 0.21
UBE2D3-232ENST00000514755 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
UBE2D3-232ENST00000514755 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.35■□□□□ 0.21
UBE2D3-232ENST00000514755 ADAMTS13Q76LX8 1427 aa16.35■□□□□ 0.21
UBE2D3-232ENST00000514755 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
UBE2D3-232ENST00000514755 NRXN3Q9Y4C0 1643 aa16.32■□□□□ 0.2
UBE2D3-232ENST00000514755 CCDC144AA2RUR9 1427 aa16.31■□□□□ 0.2
UBE2D3-232ENST00000514755 ACIN1Q9UKV3 1341 aaKnown RBP16.3■□□□□ 0.2
UBE2D3-232ENST00000514755 KCNA6P17658 529 aa16.3■□□□□ 0.2
UBE2D3-232ENST00000514755 HRCP23327 699 aa16.3■□□□□ 0.2
UBE2D3-232ENST00000514755 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
UBE2D3-232ENST00000514755 XIRP1Q702N8 1843 aaKnown RBP16.3■□□□□ 0.2
UBE2D3-232ENST00000514755 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
UBE2D3-232ENST00000514755 UBAP1LF5GYI3 381 aa16.29■□□□□ 0.2
UBE2D3-232ENST00000514755 TBX22Q9Y458 520 aa16.29■□□□□ 0.2
UBE2D3-232ENST00000514755 CHD2O14647 1828 aaKnown RBP16.29■□□□□ 0.2
UBE2D3-232ENST00000514755 SPATA31E1Q6ZUB1 1445 aa16.28■□□□□ 0.2
UBE2D3-232ENST00000514755 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
UBE2D3-232ENST00000514755 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
UBE2D3-232ENST00000514755 SETBP1Q9Y6X0 1596 aa16.27■□□□□ 0.2
UBE2D3-232ENST00000514755 RGL3Q3MIN7 710 aa16.27■□□□□ 0.2
UBE2D3-232ENST00000514755 PIP4P2Q8N4L2 257 aa16.27■□□□□ 0.2
UBE2D3-232ENST00000514755 PTPRUQ92729 1446 aa16.27■□□□□ 0.19
UBE2D3-232ENST00000514755 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms