RNA–Protein interactions for RNA: ENST00000513794.1

TRIM23-207, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-207ENST00000513794 ATXN8OSP0DMR3 200 aa17.36■□□□□ 0.37
TRIM23-207ENST00000513794 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
TRIM23-207ENST00000513794 TMEM2Q9UHN6 1383 aa17.36■□□□□ 0.37
TRIM23-207ENST00000513794 SETD5Q9C0A6 1442 aa17.36■□□□□ 0.37
TRIM23-207ENST00000513794 SYNMO15061 1565 aa17.34■□□□□ 0.37
TRIM23-207ENST00000513794 ZNF326Q5BKZ1 582 aaKnown RBP17.34■□□□□ 0.37
TRIM23-207ENST00000513794 IQGAP3Q86VI3 1631 aa17.34■□□□□ 0.37
TRIM23-207ENST00000513794 SLC26A8Q96RN1 970 aa17.33■□□□□ 0.36
TRIM23-207ENST00000513794 PIK3C2BO00750 1634 aa17.32■□□□□ 0.36
TRIM23-207ENST00000513794 UBR1Q8IWV7 1749 aa17.31■□□□□ 0.36
TRIM23-207ENST00000513794 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRIM23-207ENST00000513794 E9PCH4 1651 aa17.31■□□□□ 0.36
TRIM23-207ENST00000513794 GCC2Q8IWJ2 1684 aa17.31■□□□□ 0.36
TRIM23-207ENST00000513794 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
TRIM23-207ENST00000513794 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
TRIM23-207ENST00000513794 MED14O60244 1454 aa17.29■□□□□ 0.36
TRIM23-207ENST00000513794 ARHGAP23Q9P227 1491 aa17.29■□□□□ 0.36
TRIM23-207ENST00000513794 RAB3GAP2Q9H2M9 1393 aa17.28■□□□□ 0.36
TRIM23-207ENST00000513794 RIMS2Q9UQ26 1411 aa17.28■□□□□ 0.36
TRIM23-207ENST00000513794 SLIT1O75093 1534 aa17.27■□□□□ 0.36
TRIM23-207ENST00000513794 NEURL4Q96JN8 1562 aa17.27■□□□□ 0.35
TRIM23-207ENST00000513794 LTBP4Q8N2S1 1624 aa17.25■□□□□ 0.35
TRIM23-207ENST00000513794 RGL3Q3MIN7 710 aa17.24■□□□□ 0.35
TRIM23-207ENST00000513794 ADGRB3O60242 1522 aa17.24■□□□□ 0.35
TRIM23-207ENST00000513794 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
TRIM23-207ENST00000513794 UBAP1LF5GYI3 381 aa17.23■□□□□ 0.35
TRIM23-207ENST00000513794 HRCP23327 699 aa17.23■□□□□ 0.35
TRIM23-207ENST00000513794 KCNA6P17658 529 aa17.22■□□□□ 0.35
TRIM23-207ENST00000513794 PROSER2Q86WR7 435 aaPredicted RBP17.21■□□□□ 0.35
TRIM23-207ENST00000513794 TMEM131LA2VDJ0 1609 aa17.21■□□□□ 0.35
TRIM23-207ENST00000513794 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
TRIM23-207ENST00000513794 TBX22Q9Y458 520 aa17.2■□□□□ 0.34
TRIM23-207ENST00000513794 PLEKHG1Q9ULL1 1385 aa17.19■□□□□ 0.34
TRIM23-207ENST00000513794 RBM33Q96EV2 1170 aaKnown RBP17.19■□□□□ 0.34
TRIM23-207ENST00000513794 ZFYVE9O95405 1425 aa17.19■□□□□ 0.34
TRIM23-207ENST00000513794 VGFO15240 615 aaPredicted RBP17.18■□□□□ 0.34
TRIM23-207ENST00000513794 KDM5AP29375 1690 aaKnown RBP17.17■□□□□ 0.34
TRIM23-207ENST00000513794 TOM1O60784 492 aa17.17■□□□□ 0.34
TRIM23-207ENST00000513794 PIP4K2BP78356 416 aa17.17■□□□□ 0.34
TRIM23-207ENST00000513794 SPHKAPQ2M3C7 1700 aa17.17■□□□□ 0.34
TRIM23-207ENST00000513794 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
TRIM23-207ENST00000513794 RPGRIP1LQ68CZ1 1315 aa17.16■□□□□ 0.34
TRIM23-207ENST00000513794 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
TRIM23-207ENST00000513794 TRPM2O94759 1503 aa17.15■□□□□ 0.34
TRIM23-207ENST00000513794 CPS1P31327 1500 aa17.14■□□□□ 0.33
TRIM23-207ENST00000513794 CLTCL1P53675 1640 aa17.14■□□□□ 0.33
TRIM23-207ENST00000513794 IQSEC2Q5JU85 1478 aa17.13■□□□□ 0.33
TRIM23-207ENST00000513794 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
TRIM23-207ENST00000513794 AMOTL2Q9Y2J4 779 aa17.13■□□□□ 0.33
TRIM23-207ENST00000513794 C14orf37Q86TY3 774 aa17.11■□□□□ 0.33
TRIM23-207ENST00000513794 LRRC7Q96NW7 1537 aa17.1■□□□□ 0.33
TRIM23-207ENST00000513794 TMEM94Q12767 1356 aa17.09■□□□□ 0.33
TRIM23-207ENST00000513794 ADAMTS13Q76LX8 1427 aa17.09■□□□□ 0.33
TRIM23-207ENST00000513794 KIF1BO60333 1816 aa17.07■□□□□ 0.32
TRIM23-207ENST00000513794 ADGRF5Q8IZF2 1346 aa17.07■□□□□ 0.32
TRIM23-207ENST00000513794 KDM2AQ9Y2K7 1162 aa17.07■□□□□ 0.32
TRIM23-207ENST00000513794 ANKRD30BQ9BXX2 1392 aa17.06■□□□□ 0.32
TRIM23-207ENST00000513794 STRCP1A6NGW2 1772 aa17.06■□□□□ 0.32
TRIM23-207ENST00000513794 METP08581 1390 aa17.05■□□□□ 0.32
TRIM23-207ENST00000513794 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
TRIM23-207ENST00000513794 PIK3R4Q99570 1358 aa17.03■□□□□ 0.32
TRIM23-207ENST00000513794 FKBP8Q14318 412 aa17.03■□□□□ 0.32
TRIM23-207ENST00000513794 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
TRIM23-207ENST00000513794 NEXMIFQ5QGS0 1516 aa17.02■□□□□ 0.32
TRIM23-207ENST00000513794 AMER1Q5JTC6 1135 aaPredicted RBP17.02■□□□□ 0.32
TRIM23-207ENST00000513794 STK26Q9P289 416 aa17.02■□□□□ 0.32
TRIM23-207ENST00000513794 SPATA31E1Q6ZUB1 1445 aa17.02■□□□□ 0.31
TRIM23-207ENST00000513794 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
TRIM23-207ENST00000513794 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
TRIM23-207ENST00000513794 PTPRUQ92729 1446 aa17.01■□□□□ 0.31
TRIM23-207ENST00000513794 HSPA1LP34931 641 aa17■□□□□ 0.31
TRIM23-207ENST00000513794 C19orf44Q9H6X5 657 aa17■□□□□ 0.31
TRIM23-207ENST00000513794 MSH6P52701 1360 aa17■□□□□ 0.31
TRIM23-207ENST00000513794 ATF3P18847 181 aa16.99■□□□□ 0.31
TRIM23-207ENST00000513794 SLAIN2Q9P270 581 aa16.99■□□□□ 0.31
TRIM23-207ENST00000513794 NEUROD1Q13562 356 aa16.98■□□□□ 0.31
TRIM23-207ENST00000513794 CFAP70Q5T0N1 1121 aa16.98■□□□□ 0.31
TRIM23-207ENST00000513794 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.31
TRIM23-207ENST00000513794 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.31
TRIM23-207ENST00000513794 NKTRP30414 1462 aaKnown RBP16.96■□□□□ 0.31
TRIM23-207ENST00000513794 DIP2AQ14689 1571 aa16.96■□□□□ 0.31
TRIM23-207ENST00000513794 SETBP1Q9Y6X0 1596 aa16.96■□□□□ 0.31
TRIM23-207ENST00000513794 CADPS2Q86UW7 1296 aa16.95■□□□□ 0.3
TRIM23-207ENST00000513794 C14orf93Q9H972 538 aaKnown RBP16.95■□□□□ 0.3
TRIM23-207ENST00000513794 ALKQ9UM73 1620 aa16.93■□□□□ 0.3
TRIM23-207ENST00000513794 WAPLQ7Z5K2 1190 aa16.93■□□□□ 0.3
TRIM23-207ENST00000513794 NRXN3Q9Y4C0 1643 aa16.92■□□□□ 0.3
TRIM23-207ENST00000513794 STAC3Q96MF2 364 aa16.92■□□□□ 0.3
TRIM23-207ENST00000513794 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
TRIM23-207ENST00000513794 NWD1Q149M9 1564 aa16.92■□□□□ 0.3
TRIM23-207ENST00000513794 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
TRIM23-207ENST00000513794 PPLO60437 1756 aa16.91■□□□□ 0.3
TRIM23-207ENST00000513794 ROBO2Q9HCK4 1378 aa16.89■□□□□ 0.3
TRIM23-207ENST00000513794 XIRP1Q702N8 1843 aaKnown RBP16.89■□□□□ 0.29
TRIM23-207ENST00000513794 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
TRIM23-207ENST00000513794 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
TRIM23-207ENST00000513794 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.29
TRIM23-207ENST00000513794 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
TRIM23-207ENST00000513794 TRAK1Q9UPV9 953 aa16.87■□□□□ 0.29
TRIM23-207ENST00000513794 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms