RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 PZPP20742 1482 aa13.45□□□□□ -0.26
CALCOCO2-217ENST00000510356 DEPDC5O75140 1603 aa13.45□□□□□ -0.26
CALCOCO2-217ENST00000510356 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
CALCOCO2-217ENST00000510356 ALKQ9UM73 1620 aa13.44□□□□□ -0.26
CALCOCO2-217ENST00000510356 RTEL1-TNFRSF6BF6WH68 1400 aa13.44□□□□□ -0.26
CALCOCO2-217ENST00000510356 UGGT1Q9NYU2 1555 aa13.44□□□□□ -0.26
CALCOCO2-217ENST00000510356 LRRC7Q96NW7 1537 aa13.44□□□□□ -0.26
CALCOCO2-217ENST00000510356 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
CALCOCO2-217ENST00000510356 KIF3BO15066 747 aa13.43□□□□□ -0.26
CALCOCO2-217ENST00000510356 RGL2O15211 777 aa13.43□□□□□ -0.26
CALCOCO2-217ENST00000510356 RNF17Q9BXT8 1623 aaKnown RBP13.42□□□□□ -0.26
CALCOCO2-217ENST00000510356 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
CALCOCO2-217ENST00000510356 EVX2Q03828 476 aa13.41□□□□□ -0.26
CALCOCO2-217ENST00000510356 POTEAQ6S8J7 498 aa13.41□□□□□ -0.26
CALCOCO2-217ENST00000510356 SYNMO15061 1565 aa13.41□□□□□ -0.26
CALCOCO2-217ENST00000510356 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.26
CALCOCO2-217ENST00000510356 LRRIQ1Q96JM4 1722 aa13.4□□□□□ -0.26
CALCOCO2-217ENST00000510356 RSPH4AQ5TD94 716 aa13.4□□□□□ -0.26
CALCOCO2-217ENST00000510356 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
CALCOCO2-217ENST00000510356 FYCO1Q9BQS8 1478 aa13.39□□□□□ -0.27
CALCOCO2-217ENST00000510356 IQGAP1P46940 1657 aa13.38□□□□□ -0.27
CALCOCO2-217ENST00000510356 RNF25Q96BH1 459 aaPredicted RBP13.36□□□□□ -0.27
CALCOCO2-217ENST00000510356 PHF12Q96QT6 1004 aa13.35□□□□□ -0.27
CALCOCO2-217ENST00000510356 MTUS2Q5JR59 1369 aa13.34□□□□□ -0.27
CALCOCO2-217ENST00000510356 EID1Q9Y6B2 187 aa13.34□□□□□ -0.27
CALCOCO2-217ENST00000510356 MBD5Q9P267 1494 aa13.34□□□□□ -0.27
CALCOCO2-217ENST00000510356 TXNDC2Q86VQ3 553 aa13.32□□□□□ -0.28
CALCOCO2-217ENST00000510356 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
CALCOCO2-217ENST00000510356 KIF12Q96FN5 646 aa13.32□□□□□ -0.28
CALCOCO2-217ENST00000510356 ZNF644Q9H582 1327 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO2-217ENST00000510356 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
CALCOCO2-217ENST00000510356 TSPY4P0CV99 314 aa13.31□□□□□ -0.28
CALCOCO2-217ENST00000510356 TSPY10P0CW01 314 aa13.31□□□□□ -0.28
CALCOCO2-217ENST00000510356 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
CALCOCO2-217ENST00000510356 MAP3K13O43283 966 aa13.3□□□□□ -0.28
CALCOCO2-217ENST00000510356 ZNF772Q68DY9 489 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO2-217ENST00000510356 UPF1Q92900 1129 aaKnown RBP eCLIP13.29□□□□□ -0.28
CALCOCO2-217ENST00000510356 STRCP1A6NGW2 1772 aa13.29□□□□□ -0.28
CALCOCO2-217ENST00000510356 CCDC141Q6ZP82 1450 aa13.29□□□□□ -0.28
CALCOCO2-217ENST00000510356 PCDHB13Q9Y5F0 798 aa13.28□□□□□ -0.28
CALCOCO2-217ENST00000510356 JCADQ9P266 1359 aa13.28□□□□□ -0.28
CALCOCO2-217ENST00000510356 LRRC9Q6ZRR7 1453 aa13.28□□□□□ -0.28
CALCOCO2-217ENST00000510356 KCNA6P17658 529 aa13.27□□□□□ -0.29
CALCOCO2-217ENST00000510356 LTKP29376 864 aa13.26□□□□□ -0.29
CALCOCO2-217ENST00000510356 TMEM94Q12767 1356 aa13.26□□□□□ -0.29
CALCOCO2-217ENST00000510356 PROSER2Q86WR7 435 aaPredicted RBP13.26□□□□□ -0.29
CALCOCO2-217ENST00000510356 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
CALCOCO2-217ENST00000510356 ERVK-7P63135 1459 aa13.25□□□□□ -0.29
CALCOCO2-217ENST00000510356 ZNF467Q7Z7K2 595 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO2-217ENST00000510356 ZC3H13Q5T200 1668 aaKnown RBP13.24□□□□□ -0.29
CALCOCO2-217ENST00000510356 SPATA31A6Q5VVP1 1343 aa13.24□□□□□ -0.29
CALCOCO2-217ENST00000510356 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
CALCOCO2-217ENST00000510356 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
CALCOCO2-217ENST00000510356 SLIT1O75093 1534 aa13.23□□□□□ -0.29
CALCOCO2-217ENST00000510356 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
CALCOCO2-217ENST00000510356 IFNL1Q8IU54 200 aa13.23□□□□□ -0.29
CALCOCO2-217ENST00000510356 SLAIN2Q9P270 581 aa13.23□□□□□ -0.29
CALCOCO2-217ENST00000510356 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
CALCOCO2-217ENST00000510356 MSH6P52701 1360 aa13.22□□□□□ -0.29
CALCOCO2-217ENST00000510356 TIAM1Q13009 1591 aa13.22□□□□□ -0.29
CALCOCO2-217ENST00000510356 ABCC3O15438 1527 aa13.22□□□□□ -0.29
CALCOCO2-217ENST00000510356 VGFO15240 615 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO2-217ENST00000510356 RXRBP28702 533 aa13.21□□□□□ -0.29
CALCOCO2-217ENST00000510356 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.29
CALCOCO2-217ENST00000510356 ROBO1Q9Y6N7 1651 aa13.21□□□□□ -0.3
CALCOCO2-217ENST00000510356 EHBP1L1Q8N3D4 1523 aa13.2□□□□□ -0.3
CALCOCO2-217ENST00000510356 TRIM52Q96A61 297 aa13.2□□□□□ -0.3
CALCOCO2-217ENST00000510356 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
CALCOCO2-217ENST00000510356 TMEM2Q9UHN6 1383 aa13.2□□□□□ -0.3
CALCOCO2-217ENST00000510356 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
CALCOCO2-217ENST00000510356 MS4A3Q96HJ5 214 aa13.19□□□□□ -0.3
CALCOCO2-217ENST00000510356 FGD6Q6ZV73 1430 aa13.19□□□□□ -0.3
CALCOCO2-217ENST00000510356 CAMSAP2Q08AD1 1489 aa13.18□□□□□ -0.3
CALCOCO2-217ENST00000510356 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
CALCOCO2-217ENST00000510356 ARHGAP31Q2M1Z3 1444 aa13.18□□□□□ -0.3
CALCOCO2-217ENST00000510356 SETD1AO15047 1707 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-217ENST00000510356 XIRP1Q702N8 1843 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-217ENST00000510356 PRDM15P57071 1507 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO2-217ENST00000510356 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
CALCOCO2-217ENST00000510356 ARHGEF5Q12774 1597 aa13.16□□□□□ -0.3
CALCOCO2-217ENST00000510356 LHX8Q68G74 356 aa13.16□□□□□ -0.3
CALCOCO2-217ENST00000510356 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-217ENST00000510356 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-217ENST00000510356 BCANQ96GW7 911 aa13.15□□□□□ -0.3
CALCOCO2-217ENST00000510356 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-217ENST00000510356 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.3
CALCOCO2-217ENST00000510356 MAP3K1Q13233 1512 aa13.14□□□□□ -0.31
CALCOCO2-217ENST00000510356 EIF2AK4Q9P2K8 1649 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-217ENST00000510356 PHLPP1O60346 1717 aa13.14□□□□□ -0.31
CALCOCO2-217ENST00000510356 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-217ENST00000510356 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-217ENST00000510356 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-217ENST00000510356 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
CALCOCO2-217ENST00000510356 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
CALCOCO2-217ENST00000510356 STK25O00506 426 aa13.12□□□□□ -0.31
CALCOCO2-217ENST00000510356 PSEN1P49768 467 aa13.12□□□□□ -0.31
CALCOCO2-217ENST00000510356 CLCN6P51797 869 aa13.12□□□□□ -0.31
CALCOCO2-217ENST00000510356 KANK1Q14678 1352 aa13.11□□□□□ -0.31
CALCOCO2-217ENST00000510356 GABBR2O75899 941 aa13.11□□□□□ -0.31
CALCOCO2-217ENST00000510356 CADPS2Q86UW7 1296 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms