RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 ABCC2Q92887 1545 aa7.55□□□□□ -1.2
SOX2-OT-218ENST00000498731 GPATCH8Q9UKJ3 1502 aaKnown RBP7.55□□□□□ -1.2
SOX2-OT-218ENST00000498731 ADCY10Q96PN6 1610 aa7.55□□□□□ -1.2
SOX2-OT-218ENST00000498731 XRCC6P12956 609 aaKnown RBP eCLIP7.55□□□□□ -1.2
SOX2-OT-218ENST00000498731 CAMSAP2Q08AD1 1489 aa7.54□□□□□ -1.2
SOX2-OT-218ENST00000498731 KIF15Q9NS87 1388 aa7.54□□□□□ -1.2
SOX2-OT-218ENST00000498731 ABCC10Q5T3U5 1492 aa7.53□□□□□ -1.2
SOX2-OT-218ENST00000498731 KIF14Q15058 1648 aa7.53□□□□□ -1.2
SOX2-OT-218ENST00000498731 ANKRD50Q9ULJ7 1429 aa7.53□□□□□ -1.2
SOX2-OT-218ENST00000498731 NBPF8Q3BBV2 869 aa7.53□□□□□ -1.2
SOX2-OT-218ENST00000498731 ARHGAP5Q13017 1502 aa7.53□□□□□ -1.2
SOX2-OT-218ENST00000498731 CLCN1P35523 988 aa7.53□□□□□ -1.2
SOX2-OT-218ENST00000498731 CALD1Q05682 793 aaKnown RBP7.53□□□□□ -1.2
SOX2-OT-218ENST00000498731 SPAG9O60271 1321 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 ZBED9Q6R2W3 1325 aa7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 KIF3BO15066 747 aa7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 GGT6Q6P531 493 aa7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 ZNF830Q96NB3 372 aaPredicted RBP7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 ESF1Q9H501 851 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 MRS2Q9HD23 443 aa7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 FAM177A1Q8N128 213 aaPredicted RBP7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 CARD11Q9BXL7 1154 aa7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 GZF1Q9H116 711 aaPredicted RBP7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 SHROOM2Q13796 1616 aa7.52□□□□□ -1.21
SOX2-OT-218ENST00000498731 C9orf84Q5VXU9 1444 aa7.51□□□□□ -1.21
SOX2-OT-218ENST00000498731 DDRGK1Q96HY6 314 aa7.51□□□□□ -1.21
SOX2-OT-218ENST00000498731 NCOA1Q15788 1441 aa7.51□□□□□ -1.21
SOX2-OT-218ENST00000498731 RNF123Q5XPI4 1314 aa7.51□□□□□ -1.21
SOX2-OT-218ENST00000498731 KDM6BO15054 1643 aa7.5□□□□□ -1.21
SOX2-OT-218ENST00000498731 SLC4A2P04920 1241 aa7.5□□□□□ -1.21
SOX2-OT-218ENST00000498731 RSPH4AQ5TD94 716 aa7.5□□□□□ -1.21
SOX2-OT-218ENST00000498731 CERS3Q8IU89 383 aa7.5□□□□□ -1.21
SOX2-OT-218ENST00000498731 VASPP50552 380 aaPredicted RBP7.5□□□□□ -1.21
SOX2-OT-218ENST00000498731 RIPK4P57078 832 aa7.5□□□□□ -1.21
SOX2-OT-218ENST00000498731 SPRYD3Q8NCJ5 442 aa7.5□□□□□ -1.21
SOX2-OT-218ENST00000498731 APBB1O00213 710 aa7.49□□□□□ -1.21
SOX2-OT-218ENST00000498731 PLIN1O60240 522 aa7.49□□□□□ -1.21
SOX2-OT-218ENST00000498731 KDM4FA0A1W2PPD8 638 aa7.49□□□□□ -1.21
SOX2-OT-218ENST00000498731 TCOF1Q13428 1488 aaKnown RBP7.49□□□□□ -1.21
SOX2-OT-218ENST00000498731 WDR7Q9Y4E6 1490 aa7.49□□□□□ -1.21
SOX2-OT-218ENST00000498731 ECM2O94769 699 aaPredicted RBP7.48□□□□□ -1.21
SOX2-OT-218ENST00000498731 NEUROD2Q15784 382 aa7.48□□□□□ -1.21
SOX2-OT-218ENST00000498731 JARID2Q92833 1246 aaPredicted RBP7.48□□□□□ -1.21
SOX2-OT-218ENST00000498731 PDCL3Q9H2J4 239 aa7.48□□□□□ -1.21
SOX2-OT-218ENST00000498731 CEBPAP49715 358 aaPredicted RBP7.48□□□□□ -1.21
SOX2-OT-218ENST00000498731 SLKQ9H2G2 1235 aaPredicted RBP7.48□□□□□ -1.21
SOX2-OT-218ENST00000498731 PRKRIP1Q9H875 184 aaPredicted RBP7.48□□□□□ -1.21
SOX2-OT-218ENST00000498731 TCERG1O14776 1098 aaKnown RBP7.47□□□□□ -1.21
SOX2-OT-218ENST00000498731 TMEM51Q9NW97 253 aa7.47□□□□□ -1.21
SOX2-OT-218ENST00000498731 ROCK1Q13464 1354 aa7.47□□□□□ -1.21
SOX2-OT-218ENST00000498731 NUDCQ9Y266 331 aa7.47□□□□□ -1.21
SOX2-OT-218ENST00000498731 COL17A1Q9UMD9 1497 aaPredicted RBP7.47□□□□□ -1.21
SOX2-OT-218ENST00000498731 RGL2O15211 777 aa7.46□□□□□ -1.21
SOX2-OT-218ENST00000498731 NUTM2DQ5VT03 806 aaPredicted RBP7.46□□□□□ -1.21
SOX2-OT-218ENST00000498731 ANKRD30BQ9BXX2 1392 aa7.46□□□□□ -1.21
SOX2-OT-218ENST00000498731 ABCA8O94911 1581 aa7.46□□□□□ -1.21
SOX2-OT-218ENST00000498731 HOXD11P31277 338 aaPredicted RBP7.46□□□□□ -1.22
SOX2-OT-218ENST00000498731 HSPA2P54652 639 aa7.46□□□□□ -1.22
SOX2-OT-218ENST00000498731 ATF5Q9Y2D1 282 aaPredicted RBP7.46□□□□□ -1.22
SOX2-OT-218ENST00000498731 SMG6Q86US8 1419 aaKnown RBP7.46□□□□□ -1.22
SOX2-OT-218ENST00000498731 SCAPERQ9BY12 1400 aa7.45□□□□□ -1.22
SOX2-OT-218ENST00000498731 PRDM16Q9HAZ2 1276 aa7.45□□□□□ -1.22
SOX2-OT-218ENST00000498731 FAM13BQ9NYF5 915 aa7.45□□□□□ -1.22
SOX2-OT-218ENST00000498731 DIP2BQ9P265 1576 aa7.45□□□□□ -1.22
SOX2-OT-218ENST00000498731 ZCCHC11Q5TAX3 1644 aaKnown RBP7.45□□□□□ -1.22
SOX2-OT-218ENST00000498731 KDM5BQ9UGL1 1544 aa7.45□□□□□ -1.22
SOX2-OT-218ENST00000498731 ST20-MTHFSA0A0A6YYL1 179 aa7.45□□□□□ -1.22
SOX2-OT-218ENST00000498731 KIAA1211Q6ZU35 1233 aa7.45□□□□□ -1.22
SOX2-OT-218ENST00000498731 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.45□□□□□ -1.22
SOX2-OT-218ENST00000498731 C8orf34Q49A92 452 aa7.44□□□□□ -1.22
SOX2-OT-218ENST00000498731 ZNF526Q8TF50 670 aaPredicted RBP7.44□□□□□ -1.22
SOX2-OT-218ENST00000498731 SYCP2Q9BX26 1530 aa7.44□□□□□ -1.22
SOX2-OT-218ENST00000498731 KIAA1107Q9UPP5 1409 aa7.44□□□□□ -1.22
SOX2-OT-218ENST00000498731 HMGB1P09429 215 aaKnown RBP7.44□□□□□ -1.22
SOX2-OT-218ENST00000498731 NBPF1Q3BBV0 1214 aa7.44□□□□□ -1.22
SOX2-OT-218ENST00000498731 CCDC141Q6ZP82 1450 aa7.44□□□□□ -1.22
SOX2-OT-218ENST00000498731 PLEKHH2Q8IVE3 1493 aa7.44□□□□□ -1.22
SOX2-OT-218ENST00000498731 CENPJQ9HC77 1338 aaPredicted RBP7.43□□□□□ -1.22
SOX2-OT-218ENST00000498731 SEC24BO95487 1268 aa7.43□□□□□ -1.22
SOX2-OT-218ENST00000498731 KIF13AQ9H1H9 1805 aa7.43□□□□□ -1.22
SOX2-OT-218ENST00000498731 DNMT1P26358 1616 aaKnown RBP7.43□□□□□ -1.22
SOX2-OT-218ENST00000498731 AEBP1Q8IUX7 1158 aa7.43□□□□□ -1.22
SOX2-OT-218ENST00000498731 TRAPPC8Q9Y2L5 1435 aa7.43□□□□□ -1.22
SOX2-OT-218ENST00000498731 CCDC144AA2RUR9 1427 aa7.43□□□□□ -1.22
SOX2-OT-218ENST00000498731 ESPNB1AK53 854 aa7.43□□□□□ -1.22
SOX2-OT-218ENST00000498731 C20orf194Q5TEA3 1177 aa7.43□□□□□ -1.22
SOX2-OT-218ENST00000498731 BCCIPQ9P287 314 aaKnown RBP eCLIP7.43□□□□□ -1.22
SOX2-OT-218ENST00000498731 FSD2A1L4K1 749 aa7.42□□□□□ -1.22
SOX2-OT-218ENST00000498731 CANXP27824 592 aaKnown RBP7.42□□□□□ -1.22
SOX2-OT-218ENST00000498731 ROCK2O75116 1388 aaKnown RBP7.42□□□□□ -1.22
SOX2-OT-218ENST00000498731 TEX14Q8IWB6 1497 aa7.42□□□□□ -1.22
SOX2-OT-218ENST00000498731 RRP1P56182 461 aaKnown RBP7.42□□□□□ -1.22
SOX2-OT-218ENST00000498731 ITSN2Q9NZM3 1697 aa7.41□□□□□ -1.22
SOX2-OT-218ENST00000498731 UHRF1BP1LA0JNW5 1464 aa7.41□□□□□ -1.22
SOX2-OT-218ENST00000498731 STAG3Q9UJ98 1225 aa7.41□□□□□ -1.22
SOX2-OT-218ENST00000498731 FANCAO15360 1455 aa7.41□□□□□ -1.22
SOX2-OT-218ENST00000498731 USP47Q96K76 1375 aa7.41□□□□□ -1.22
SOX2-OT-218ENST00000498731 KIF7Q2M1P5 1343 aa7.41□□□□□ -1.22
SOX2-OT-218ENST00000498731 PZPP20742 1482 aa7.41□□□□□ -1.22
SOX2-OT-218ENST00000498731 IPO4Q8TEX9 1081 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms