RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 SETD5Q9C0A6 1442 aa17.13■□□□□ 0.33
HLA-B-254ENST00000497377 IDI1Q13907 227 aa17.12■□□□□ 0.33
HLA-B-254ENST00000497377 ANKLE2Q86XL3 938 aa17.12■□□□□ 0.33
HLA-B-254ENST00000497377 STAG3Q9UJ98 1225 aa17.11■□□□□ 0.33
HLA-B-254ENST00000497377 NCKAP5LQ9HCH0 1330 aa17.11■□□□□ 0.33
HLA-B-254ENST00000497377 SLIT1O75093 1534 aa17.1■□□□□ 0.33
HLA-B-254ENST00000497377 SPHKAPQ2M3C7 1700 aa17.1■□□□□ 0.33
HLA-B-254ENST00000497377 ADGRB3O60242 1522 aa17.09■□□□□ 0.33
HLA-B-254ENST00000497377 MED14O60244 1454 aa17.08■□□□□ 0.32
HLA-B-254ENST00000497377 ARHGAP23Q9P227 1491 aa17.08■□□□□ 0.32
HLA-B-254ENST00000497377 NEURL4Q96JN8 1562 aa17.06■□□□□ 0.32
HLA-B-254ENST00000497377 TMEM2Q9UHN6 1383 aa17.06■□□□□ 0.32
HLA-B-254ENST00000497377 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
HLA-B-254ENST00000497377 EID1Q9Y6B2 187 aa17.05■□□□□ 0.32
HLA-B-254ENST00000497377 RAB3GAP2Q9H2M9 1393 aa17.04■□□□□ 0.32
HLA-B-254ENST00000497377 TMEM131LA2VDJ0 1609 aa17.04■□□□□ 0.32
HLA-B-254ENST00000497377 ZBTB22O15209 634 aa17.04■□□□□ 0.32
HLA-B-254ENST00000497377 HRCP23327 699 aa17.04■□□□□ 0.32
HLA-B-254ENST00000497377 TRPM2O94759 1503 aa17.04■□□□□ 0.32
HLA-B-254ENST00000497377 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
HLA-B-254ENST00000497377 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
HLA-B-254ENST00000497377 IQGAP1P46940 1657 aa17.03■□□□□ 0.32
HLA-B-254ENST00000497377 TXNDC2Q86VQ3 553 aa17.02■□□□□ 0.32
HLA-B-254ENST00000497377 MYO5BQ9ULV0 1848 aa17.01■□□□□ 0.31
HLA-B-254ENST00000497377 HDGFP51858 240 aaKnown RBP17.01■□□□□ 0.31
HLA-B-254ENST00000497377 MPHOSPH9Q99550 1183 aa17.01■□□□□ 0.31
HLA-B-254ENST00000497377 CHGAP10645 457 aaKnown RBP16.99■□□□□ 0.31
HLA-B-254ENST00000497377 LTKP29376 864 aa16.99■□□□□ 0.31
HLA-B-254ENST00000497377 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
HLA-B-254ENST00000497377 CLTCL1P53675 1640 aa16.98■□□□□ 0.31
HLA-B-254ENST00000497377 ZFYVE9O95405 1425 aa16.97■□□□□ 0.31
HLA-B-254ENST00000497377 KIF1BO60333 1816 aa16.97■□□□□ 0.31
HLA-B-254ENST00000497377 RIMS2Q9UQ26 1411 aa16.96■□□□□ 0.31
HLA-B-254ENST00000497377 LTBP4Q8N2S1 1624 aa16.96■□□□□ 0.31
HLA-B-254ENST00000497377 CERKQ8TCT0 537 aa16.95■□□□□ 0.3
HLA-B-254ENST00000497377 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
HLA-B-254ENST00000497377 ZNF335Q9H4Z2 1342 aaPredicted RBP16.94■□□□□ 0.3
HLA-B-254ENST00000497377 PLEKHG1Q9ULL1 1385 aa16.93■□□□□ 0.3
HLA-B-254ENST00000497377 PPP1R15AO75807 674 aaPredicted RBP16.93■□□□□ 0.3
HLA-B-254ENST00000497377 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
HLA-B-254ENST00000497377 CPS1P31327 1500 aa16.92■□□□□ 0.3
HLA-B-254ENST00000497377 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
HLA-B-254ENST00000497377 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
HLA-B-254ENST00000497377 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
HLA-B-254ENST00000497377 RPGRIP1LQ68CZ1 1315 aa16.88■□□□□ 0.29
HLA-B-254ENST00000497377 DIP2AQ14689 1571 aa16.87■□□□□ 0.29
HLA-B-254ENST00000497377 FBXO41Q8TF61 875 aa16.87■□□□□ 0.29
HLA-B-254ENST00000497377 BCANQ96GW7 911 aa16.87■□□□□ 0.29
HLA-B-254ENST00000497377 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
HLA-B-254ENST00000497377 SLC26A8Q96RN1 970 aa16.85■□□□□ 0.29
HLA-B-254ENST00000497377 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
HLA-B-254ENST00000497377 VGFO15240 615 aaPredicted RBP16.84■□□□□ 0.29
HLA-B-254ENST00000497377 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
HLA-B-254ENST00000497377 NUTM2DQ5VT03 806 aaPredicted RBP16.83■□□□□ 0.28
HLA-B-254ENST00000497377 POTEHQ6S545 545 aa16.83■□□□□ 0.28
HLA-B-254ENST00000497377 SPATA31E1Q6ZUB1 1445 aa16.83■□□□□ 0.28
HLA-B-254ENST00000497377 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
HLA-B-254ENST00000497377 SETBP1Q9Y6X0 1596 aa16.83■□□□□ 0.28
HLA-B-254ENST00000497377 PPLO60437 1756 aa16.82■□□□□ 0.28
HLA-B-254ENST00000497377 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
HLA-B-254ENST00000497377 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
HLA-B-254ENST00000497377 KCNA6P17658 529 aa16.82■□□□□ 0.28
HLA-B-254ENST00000497377 ZBTB12Q9Y330 459 aaPredicted RBP16.81■□□□□ 0.28
HLA-B-254ENST00000497377 NWD1Q149M9 1564 aa16.81■□□□□ 0.28
HLA-B-254ENST00000497377 ATXN8OSP0DMR3 200 aa16.8■□□□□ 0.28
HLA-B-254ENST00000497377 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
HLA-B-254ENST00000497377 CHD2O14647 1828 aaKnown RBP16.8■□□□□ 0.28
HLA-B-254ENST00000497377 NRXN3Q9Y4C0 1643 aa16.79■□□□□ 0.28
HLA-B-254ENST00000497377 ILDR1Q86SU0 546 aaPredicted RBP16.79■□□□□ 0.28
HLA-B-254ENST00000497377 LRRC7Q96NW7 1537 aa16.79■□□□□ 0.28
HLA-B-254ENST00000497377 IFT172Q9UG01 1749 aa16.78■□□□□ 0.28
HLA-B-254ENST00000497377 RGL3Q3MIN7 710 aa16.77■□□□□ 0.28
HLA-B-254ENST00000497377 PROSER2Q86WR7 435 aaPredicted RBP16.73■□□□□ 0.27
HLA-B-254ENST00000497377 ALKQ9UM73 1620 aa16.72■□□□□ 0.27
HLA-B-254ENST00000497377 UBAP1LF5GYI3 381 aa16.72■□□□□ 0.27
HLA-B-254ENST00000497377 TOM1O60784 492 aa16.72■□□□□ 0.27
HLA-B-254ENST00000497377 STAC3Q96MF2 364 aa16.72■□□□□ 0.27
HLA-B-254ENST00000497377 XIRP1Q702N8 1843 aaKnown RBP16.72■□□□□ 0.27
HLA-B-254ENST00000497377 MYOM2P54296 1465 aa16.72■□□□□ 0.27
HLA-B-254ENST00000497377 NCOA3Q9Y6Q9 1424 aa16.71■□□□□ 0.27
HLA-B-254ENST00000497377 TMEM94Q12767 1356 aa16.71■□□□□ 0.27
HLA-B-254ENST00000497377 ADGRF5Q8IZF2 1346 aa16.7■□□□□ 0.26
HLA-B-254ENST00000497377 SETD1AO15047 1707 aaKnown RBP16.7■□□□□ 0.26
HLA-B-254ENST00000497377 XRN1Q8IZH2 1706 aaKnown RBP16.7■□□□□ 0.26
HLA-B-254ENST00000497377 METP08581 1390 aa16.7■□□□□ 0.26
HLA-B-254ENST00000497377 AMOTL2Q9Y2J4 779 aa16.7■□□□□ 0.26
HLA-B-254ENST00000497377 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
HLA-B-254ENST00000497377 PIK3C2GO75747 1445 aa16.69■□□□□ 0.26
HLA-B-254ENST00000497377 NRXN1Q9ULB1 1477 aa16.68■□□□□ 0.26
HLA-B-254ENST00000497377 LAMC1P11047 1609 aa16.67■□□□□ 0.26
HLA-B-254ENST00000497377 DHX57Q6P158 1386 aaKnown RBP16.66■□□□□ 0.26
HLA-B-254ENST00000497377 PRAG1Q86YV5 1406 aa16.66■□□□□ 0.26
HLA-B-254ENST00000497377 MSH6P52701 1360 aa16.65■□□□□ 0.26
HLA-B-254ENST00000497377 PTCH1Q13635 1447 aa16.63■□□□□ 0.25
HLA-B-254ENST00000497377 DCAF11Q8TEB1 546 aa16.63■□□□□ 0.25
HLA-B-254ENST00000497377 C14orf93Q9H972 538 aaKnown RBP16.63■□□□□ 0.25
HLA-B-254ENST00000497377 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
HLA-B-254ENST00000497377 RBM33Q96EV2 1170 aaKnown RBP16.61■□□□□ 0.25
HLA-B-254ENST00000497377 C19orf44Q9H6X5 657 aa16.61■□□□□ 0.25
HLA-B-254ENST00000497377 PIP4K2BP78356 416 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms