RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 GLI2P10070 1586 aa15.83■□□□□ 0.12
RAB11FIP3-211ENST00000495663 PPP1R15BQ5SWA1 713 aa15.82■□□□□ 0.12
RAB11FIP3-211ENST00000495663 KCNH8Q96L42 1107 aa15.82■□□□□ 0.12
RAB11FIP3-211ENST00000495663 MAGI3Q5TCQ9 1506 aa15.82■□□□□ 0.12
RAB11FIP3-211ENST00000495663 KIF14Q15058 1648 aa15.82■□□□□ 0.12
RAB11FIP3-211ENST00000495663 EHBP1L1Q8N3D4 1523 aa15.81■□□□□ 0.12
RAB11FIP3-211ENST00000495663 RNF166Q96A37 237 aaPredicted RBP15.81■□□□□ 0.12
RAB11FIP3-211ENST00000495663 MYT1LQ9UL68 1186 aa15.81■□□□□ 0.12
RAB11FIP3-211ENST00000495663 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
RAB11FIP3-211ENST00000495663 ABCA9Q8IUA7 1624 aa15.79■□□□□ 0.12
RAB11FIP3-211ENST00000495663 FAM69CQ0P6D2 419 aa15.79■□□□□ 0.12
RAB11FIP3-211ENST00000495663 MAP3K4Q9Y6R4 1608 aa15.79■□□□□ 0.12
RAB11FIP3-211ENST00000495663 TBC1D12O60347 775 aa15.78■□□□□ 0.12
RAB11FIP3-211ENST00000495663 PBX2P40425 430 aa15.78■□□□□ 0.12
RAB11FIP3-211ENST00000495663 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
RAB11FIP3-211ENST00000495663 PDE4AP27815 886 aa15.77■□□□□ 0.12
RAB11FIP3-211ENST00000495663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.77■□□□□ 0.11
RAB11FIP3-211ENST00000495663 SUPT6HQ7KZ85 1726 aaKnown RBP15.77■□□□□ 0.11
RAB11FIP3-211ENST00000495663 TSPOAP1O95153 1857 aa15.76■□□□□ 0.11
RAB11FIP3-211ENST00000495663 OXER1Q8TDS5 423 aa15.76■□□□□ 0.11
RAB11FIP3-211ENST00000495663 TTC37Q6PGP7 1564 aa15.75■□□□□ 0.11
RAB11FIP3-211ENST00000495663 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
RAB11FIP3-211ENST00000495663 MYO5CQ9NQX4 1742 aa15.74■□□□□ 0.11
RAB11FIP3-211ENST00000495663 PSDA5PKW4 1024 aaPredicted RBP15.73■□□□□ 0.11
RAB11FIP3-211ENST00000495663 CD109Q6YHK3 1445 aa15.72■□□□□ 0.11
RAB11FIP3-211ENST00000495663 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
RAB11FIP3-211ENST00000495663 PPRC1Q5VV67 1664 aaKnown RBP15.71■□□□□ 0.11
RAB11FIP3-211ENST00000495663 CDC42BPAQ5VT25 1732 aa15.71■□□□□ 0.1
RAB11FIP3-211ENST00000495663 CADPS2Q86UW7 1296 aa15.7■□□□□ 0.1
RAB11FIP3-211ENST00000495663 ARHGAP33O14559 1287 aa15.69■□□□□ 0.1
RAB11FIP3-211ENST00000495663 PPP4R3BQ5MIZ7 849 aa15.69■□□□□ 0.1
RAB11FIP3-211ENST00000495663 DDX27Q96GQ7 796 aaKnown RBP15.69■□□□□ 0.1
RAB11FIP3-211ENST00000495663 NCOA2Q15596 1464 aa15.69■□□□□ 0.1
RAB11FIP3-211ENST00000495663 ITSN2Q9NZM3 1697 aa15.69■□□□□ 0.1
RAB11FIP3-211ENST00000495663 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
RAB11FIP3-211ENST00000495663 TEX14Q8IWB6 1497 aa15.68■□□□□ 0.1
RAB11FIP3-211ENST00000495663 PTGER2P43116 358 aa15.68■□□□□ 0.1
RAB11FIP3-211ENST00000495663 PSEN2P49810 448 aa15.68■□□□□ 0.1
RAB11FIP3-211ENST00000495663 CDC42BPBQ9Y5S2 1711 aa15.68■□□□□ 0.1
RAB11FIP3-211ENST00000495663 ARAP3Q8WWN8 1544 aa15.67■□□□□ 0.1
RAB11FIP3-211ENST00000495663 CFAP74Q9C0B2 1584 aa15.66■□□□□ 0.1
RAB11FIP3-211ENST00000495663 PLCH2O75038 1416 aa15.66■□□□□ 0.1
RAB11FIP3-211ENST00000495663 CCNB3Q8WWL7 1395 aa15.65■□□□□ 0.1
RAB11FIP3-211ENST00000495663 DMRTA1Q5VZB9 504 aa15.65■□□□□ 0.1
RAB11FIP3-211ENST00000495663 ARHGAP5Q13017 1502 aa15.64■□□□□ 0.09
RAB11FIP3-211ENST00000495663 GPATCH8Q9UKJ3 1502 aaKnown RBP15.63■□□□□ 0.09
RAB11FIP3-211ENST00000495663 RTN4Q9NQC3 1192 aaKnown RBP15.63■□□□□ 0.09
RAB11FIP3-211ENST00000495663 MFSD10Q14728 455 aa15.62■□□□□ 0.09
RAB11FIP3-211ENST00000495663 ADGRD1Q6QNK2 874 aa15.62■□□□□ 0.09
RAB11FIP3-211ENST00000495663 ZNF454Q8N9F8 522 aa15.62■□□□□ 0.09
RAB11FIP3-211ENST00000495663 KCNK17Q96T54 332 aa15.62■□□□□ 0.09
RAB11FIP3-211ENST00000495663 FANCAO15360 1455 aa15.62■□□□□ 0.09
RAB11FIP3-211ENST00000495663 NEO1Q92859 1461 aa15.61■□□□□ 0.09
RAB11FIP3-211ENST00000495663 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
RAB11FIP3-211ENST00000495663 PPARGC1BQ86YN6 1023 aaKnown RBP15.6■□□□□ 0.09
RAB11FIP3-211ENST00000495663 EFCAB2Q5VUJ9 269 aa15.59■□□□□ 0.09
RAB11FIP3-211ENST00000495663 BBXQ8WY36 941 aaPredicted RBP15.59■□□□□ 0.09
RAB11FIP3-211ENST00000495663 PHLDB1Q86UU1 1377 aa15.59■□□□□ 0.09
RAB11FIP3-211ENST00000495663 MYOM3Q5VTT5 1437 aa15.59■□□□□ 0.09
RAB11FIP3-211ENST00000495663 EVI5O60447 810 aa15.58■□□□□ 0.08
RAB11FIP3-211ENST00000495663 CFDP1Q9UEE9 299 aaPredicted RBP15.58■□□□□ 0.08
RAB11FIP3-211ENST00000495663 EMILIN3Q9NT22 766 aa15.57■□□□□ 0.08
RAB11FIP3-211ENST00000495663 AKNAQ7Z591 1439 aa15.57■□□□□ 0.08
RAB11FIP3-211ENST00000495663 SAMD9LQ8IVG5 1584 aa15.57■□□□□ 0.08
RAB11FIP3-211ENST00000495663 KDM6BO15054 1643 aa15.57■□□□□ 0.08
RAB11FIP3-211ENST00000495663 MIA2Q96PC5 1412 aa15.56■□□□□ 0.08
RAB11FIP3-211ENST00000495663 MAP3K9P80192 1104 aa15.55■□□□□ 0.08
RAB11FIP3-211ENST00000495663 ABCC1P33527 1531 aa15.54■□□□□ 0.08
RAB11FIP3-211ENST00000495663 ADGRL1O94910 1474 aa15.54■□□□□ 0.08
RAB11FIP3-211ENST00000495663 ZNF777Q9ULD5 760 aaPredicted RBP15.54■□□□□ 0.08
RAB11FIP3-211ENST00000495663 PLEKHH2Q8IVE3 1493 aa15.53■□□□□ 0.08
RAB11FIP3-211ENST00000495663 PTPN23Q9H3S7 1636 aa15.53■□□□□ 0.08
RAB11FIP3-211ENST00000495663 FGD6Q6ZV73 1430 aa15.52■□□□□ 0.08
RAB11FIP3-211ENST00000495663 FOSBP53539 338 aa15.52■□□□□ 0.08
RAB11FIP3-211ENST00000495663 CAMSAP2Q08AD1 1489 aa15.52■□□□□ 0.07
RAB11FIP3-211ENST00000495663 RICTORQ6R327 1708 aa15.51■□□□□ 0.07
RAB11FIP3-211ENST00000495663 SCAPERQ9BY12 1400 aa15.51■□□□□ 0.07
RAB11FIP3-211ENST00000495663 SYCP2Q9BX26 1530 aa15.5■□□□□ 0.07
RAB11FIP3-211ENST00000495663 TK2O00142 265 aa15.5■□□□□ 0.07
RAB11FIP3-211ENST00000495663 DENND4BO75064 1496 aaPredicted RBP15.5■□□□□ 0.07
RAB11FIP3-211ENST00000495663 ANO8Q9HCE9 1232 aaPredicted RBP15.49■□□□□ 0.07
RAB11FIP3-211ENST00000495663 KIAA1107Q9UPP5 1409 aa15.49■□□□□ 0.07
RAB11FIP3-211ENST00000495663 ZNF644Q9H582 1327 aaPredicted RBP15.48■□□□□ 0.07
RAB11FIP3-211ENST00000495663 TCOF1Q13428 1488 aaKnown RBP15.48■□□□□ 0.07
RAB11FIP3-211ENST00000495663 COL17A1Q9UMD9 1497 aaPredicted RBP15.48■□□□□ 0.07
RAB11FIP3-211ENST00000495663 ARHGEF12Q9NZN5 1544 aa15.48■□□□□ 0.07
RAB11FIP3-211ENST00000495663 HRO43593 1189 aa15.47■□□□□ 0.07
RAB11FIP3-211ENST00000495663 FRMPD1Q5SYB0 1578 aa15.47■□□□□ 0.07
RAB11FIP3-211ENST00000495663 POGZQ7Z3K3 1410 aa15.47■□□□□ 0.07
RAB11FIP3-211ENST00000495663 BCL2L12Q9HB09 334 aa15.47■□□□□ 0.07
RAB11FIP3-211ENST00000495663 ZNF518AQ6AHZ1 1483 aa15.46■□□□□ 0.07
RAB11FIP3-211ENST00000495663 ARHGEF5Q12774 1597 aa15.46■□□□□ 0.07
RAB11FIP3-211ENST00000495663 HNRNPMP52272 730 aaKnown RBP eCLIP15.45■□□□□ 0.068e-7■■■□□ 17.3
RAB11FIP3-211ENST00000495663 SPRYD3Q8NCJ5 442 aa15.45■□□□□ 0.06
RAB11FIP3-211ENST00000495663 RAPGEF3O95398 923 aa15.44■□□□□ 0.06
RAB11FIP3-211ENST00000495663 ADAM33Q9BZ11 813 aa15.44■□□□□ 0.06
RAB11FIP3-211ENST00000495663 MBD5Q9P267 1494 aa15.44■□□□□ 0.06
RAB11FIP3-211ENST00000495663 KDM5CP41229 1560 aa15.44■□□□□ 0.06
RAB11FIP3-211ENST00000495663 RRBP1Q9P2E9 1410 aaKnown RBP15.43■□□□□ 0.06
RAB11FIP3-211ENST00000495663 TRAPPC8Q9Y2L5 1435 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms