RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 ARHGAP5Q13017 1502 aa13.08□□□□□ -0.31
TSC1-207ENST00000493467 RNF17Q9BXT8 1623 aaKnown RBP13.08□□□□□ -0.31
TSC1-207ENST00000493467 PLA2R1Q13018 1463 aa13.08□□□□□ -0.32
TSC1-207ENST00000493467 COL17A1Q9UMD9 1497 aaPredicted RBP13.08□□□□□ -0.32
TSC1-207ENST00000493467 ZMYM4Q5VZL5 1548 aa13.07□□□□□ -0.32
TSC1-207ENST00000493467 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
TSC1-207ENST00000493467 A2MP01023 1474 aa13.07□□□□□ -0.32
TSC1-207ENST00000493467 ST20-MTHFSA0A0A6YYL1 179 aa13.07□□□□□ -0.32
TSC1-207ENST00000493467 PARD3Q8TEW0 1356 aa13.06□□□□□ -0.32
TSC1-207ENST00000493467 B4GALNT3Q6L9W6 998 aa13.06□□□□□ -0.32
TSC1-207ENST00000493467 POLR3GLQ9BT43 218 aa13.06□□□□□ -0.32
TSC1-207ENST00000493467 INSRP06213 1382 aa13.06□□□□□ -0.32
TSC1-207ENST00000493467 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
TSC1-207ENST00000493467 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
TSC1-207ENST00000493467 TMC1Q8TDI8 760 aa13.05□□□□□ -0.32
TSC1-207ENST00000493467 ARID3AQ99856 593 aa13.04□□□□□ -0.32
TSC1-207ENST00000493467 WASHC2CQ9Y4E1 1318 aa13.01□□□□□ -0.33
TSC1-207ENST00000493467 ABCC1P33527 1531 aa13.01□□□□□ -0.33
TSC1-207ENST00000493467 NLRP13Q86W25 1043 aa13□□□□□ -0.33
TSC1-207ENST00000493467 SLC24A3Q9HC58 644 aa13□□□□□ -0.33
TSC1-207ENST00000493467 KCNV2Q8TDN2 545 aa13□□□□□ -0.33
TSC1-207ENST00000493467 ZCCHC11Q5TAX3 1644 aaKnown RBP12.99□□□□□ -0.33
TSC1-207ENST00000493467 UHRF1BP1LA0JNW5 1464 aa12.99□□□□□ -0.33
TSC1-207ENST00000493467 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
TSC1-207ENST00000493467 ARAP3Q8WWN8 1544 aa12.99□□□□□ -0.33
TSC1-207ENST00000493467 PLCH2O75038 1416 aa12.98□□□□□ -0.33
TSC1-207ENST00000493467 MADDQ8WXG6 1647 aa12.98□□□□□ -0.33
TSC1-207ENST00000493467 ERCC6L2Q5T890 1561 aa12.98□□□□□ -0.33
TSC1-207ENST00000493467 BLMP54132 1417 aaPredicted RBP12.98□□□□□ -0.33
TSC1-207ENST00000493467 PER1O15534 1290 aaPredicted RBP12.97□□□□□ -0.33
TSC1-207ENST00000493467 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
TSC1-207ENST00000493467 SPHKAPQ2M3C7 1700 aa12.97□□□□□ -0.33
TSC1-207ENST00000493467 CEP152O94986 1710 aa12.97□□□□□ -0.33
TSC1-207ENST00000493467 POLA2Q14181 598 aa12.97□□□□□ -0.33
TSC1-207ENST00000493467 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
TSC1-207ENST00000493467 STAG3Q9UJ98 1225 aa12.97□□□□□ -0.33
TSC1-207ENST00000493467 DEPDC5O75140 1603 aa12.96□□□□□ -0.33
TSC1-207ENST00000493467 ZC3H15Q8WU90 426 aaKnown RBP12.96□□□□□ -0.33
TSC1-207ENST00000493467 TESK2Q96S53 571 aa12.96□□□□□ -0.33
TSC1-207ENST00000493467 DISP3Q9P2K9 1392 aa12.96□□□□□ -0.33
TSC1-207ENST00000493467 TRPM2O94759 1503 aa12.96□□□□□ -0.33
TSC1-207ENST00000493467 CCDC136Q96JN2 1154 aa12.96□□□□□ -0.34
TSC1-207ENST00000493467 CLASP1Q7Z460 1538 aa12.95□□□□□ -0.34
TSC1-207ENST00000493467 CNGB1Q14028 1251 aaPredicted RBP12.95□□□□□ -0.34
TSC1-207ENST00000493467 NBPF1Q3BBV0 1214 aa12.94□□□□□ -0.34
TSC1-207ENST00000493467 C1orf115Q9H7X2 142 aa12.94□□□□□ -0.34
TSC1-207ENST00000493467 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
TSC1-207ENST00000493467 RRP1P56182 461 aaKnown RBP12.94□□□□□ -0.34
TSC1-207ENST00000493467 RTEL1-TNFRSF6BF6WH68 1400 aa12.94□□□□□ -0.34
TSC1-207ENST00000493467 ZFYVE16Q7Z3T8 1539 aa12.94□□□□□ -0.34
TSC1-207ENST00000493467 SYNMO15061 1565 aa12.92□□□□□ -0.34
TSC1-207ENST00000493467 KIAA1210Q9ULL0 1709 aa12.92□□□□□ -0.34
TSC1-207ENST00000493467 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
TSC1-207ENST00000493467 TET3O43151 1660 aa12.92□□□□□ -0.34
TSC1-207ENST00000493467 VWDEQ8N2E2 1590 aa12.91□□□□□ -0.34
TSC1-207ENST00000493467 PTPRTO14522 1441 aa12.91□□□□□ -0.34
TSC1-207ENST00000493467 SCAPERQ9BY12 1400 aa12.91□□□□□ -0.34
TSC1-207ENST00000493467 TMF1P82094 1093 aa12.9□□□□□ -0.34
TSC1-207ENST00000493467 RGL3Q3MIN7 710 aa12.9□□□□□ -0.34
TSC1-207ENST00000493467 RSPH6AQ9H0K4 717 aa12.9□□□□□ -0.34
TSC1-207ENST00000493467 WDR7Q9Y4E6 1490 aa12.9□□□□□ -0.34
TSC1-207ENST00000493467 EFCAB2Q5VUJ9 269 aa12.9□□□□□ -0.34
TSC1-207ENST00000493467 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.35
TSC1-207ENST00000493467 CLTCL1P53675 1640 aa12.89□□□□□ -0.35
TSC1-207ENST00000493467 TRAPPC8Q9Y2L5 1435 aa12.89□□□□□ -0.35
TSC1-207ENST00000493467 RCAN3Q9UKA8 241 aa12.89□□□□□ -0.35
TSC1-207ENST00000493467 STAC3Q96MF2 364 aa12.89□□□□□ -0.35
TSC1-207ENST00000493467 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
TSC1-207ENST00000493467 MYOM1P52179 1685 aa12.88□□□□□ -0.35
TSC1-207ENST00000493467 STK25O00506 426 aa12.87□□□□□ -0.35
TSC1-207ENST00000493467 NOP58Q9Y2X3 529 aaKnown RBP12.87□□□□□ -0.35
TSC1-207ENST00000493467 SCAF11Q99590 1463 aaKnown RBP12.87□□□□□ -0.35
TSC1-207ENST00000493467 PANK3Q9H999 370 aa12.86□□□□□ -0.35
TSC1-207ENST00000493467 ATP7AQ04656 1500 aa12.84□□□□□ -0.35
TSC1-207ENST00000493467 EXOC6Q8TAG9 804 aa12.84□□□□□ -0.35
TSC1-207ENST00000493467 ASXL1Q8IXJ9 1541 aa12.84□□□□□ -0.35
TSC1-207ENST00000493467 NPC1L1Q9UHC9 1359 aa12.84□□□□□ -0.35
TSC1-207ENST00000493467 KDM5AP29375 1690 aaKnown RBP12.84□□□□□ -0.35
TSC1-207ENST00000493467 PIK3C2GO75747 1445 aa12.83□□□□□ -0.36
TSC1-207ENST00000493467 TCERG1O14776 1098 aaKnown RBP12.83□□□□□ -0.36
TSC1-207ENST00000493467 ANP32AP39687 249 aaKnown RBP12.83□□□□□ -0.36
TSC1-207ENST00000493467 CC2D1BQ5T0F9 858 aaKnown RBP12.83□□□□□ -0.36
TSC1-207ENST00000493467 IFT172Q9UG01 1749 aa12.83□□□□□ -0.36
TSC1-207ENST00000493467 MYOM2P54296 1465 aa12.83□□□□□ -0.36
TSC1-207ENST00000493467 MROH1Q8NDA8 1641 aa12.83□□□□□ -0.36
TSC1-207ENST00000493467 SPAG9O60271 1321 aaKnown RBP12.83□□□□□ -0.36
TSC1-207ENST00000493467 SENP3-EIF4A1A0A087X0R7 540 aa12.82□□□□□ -0.36
TSC1-207ENST00000493467 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
TSC1-207ENST00000493467 IPO9Q96P70 1041 aaKnown RBP12.82□□□□□ -0.36
TSC1-207ENST00000493467 MAP3K4Q9Y6R4 1608 aa12.82□□□□□ -0.36
TSC1-207ENST00000493467 EIF3AQ14152 1382 aaKnown RBP12.81□□□□□ -0.36
TSC1-207ENST00000493467 MYO3AQ8NEV4 1616 aa12.81□□□□□ -0.36
TSC1-207ENST00000493467 MS4A1P11836 297 aa12.81□□□□□ -0.36
TSC1-207ENST00000493467 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
TSC1-207ENST00000493467 RIOK3O14730 519 aaKnown RBP12.8□□□□□ -0.36
TSC1-207ENST00000493467 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
TSC1-207ENST00000493467 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
TSC1-207ENST00000493467 BCL11AQ9H165 835 aa12.8□□□□□ -0.36
TSC1-207ENST00000493467 KANK1Q14678 1352 aa12.79□□□□□ -0.36
TSC1-207ENST00000493467 NECTIN2Q92692 538 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms