RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 FGD6Q6ZV73 1430 aa4.52□□□□□ -1.69
DEPDC1-203ENST00000488146 UBR1Q8IWV7 1749 aa4.52□□□□□ -1.69
DEPDC1-203ENST00000488146 RAPGEF3O95398 923 aa4.51□□□□□ -1.69
DEPDC1-203ENST00000488146 ZMYM3Q14202 1370 aa4.51□□□□□ -1.69
DEPDC1-203ENST00000488146 ADGRL2O95490 1459 aa4.51□□□□□ -1.69
DEPDC1-203ENST00000488146 ALKQ9UM73 1620 aa4.51□□□□□ -1.69
DEPDC1-203ENST00000488146 BCANQ96GW7 911 aa4.51□□□□□ -1.69
DEPDC1-203ENST00000488146 TSHZ2Q9NRE2 1034 aa4.51□□□□□ -1.69
DEPDC1-203ENST00000488146 PLCD3Q8N3E9 789 aa4.5□□□□□ -1.69
DEPDC1-203ENST00000488146 FAM135BQ49AJ0 1406 aa4.5□□□□□ -1.69
DEPDC1-203ENST00000488146 ERVK-7P63135 1459 aa4.5□□□□□ -1.69
DEPDC1-203ENST00000488146 IQGAP3Q86VI3 1631 aa4.5□□□□□ -1.69
DEPDC1-203ENST00000488146 TNRQ92752 1358 aa4.5□□□□□ -1.69
DEPDC1-203ENST00000488146 PIK3R4Q99570 1358 aa4.5□□□□□ -1.69
DEPDC1-203ENST00000488146 EFCAB6Q5THR3 1501 aa4.5□□□□□ -1.69
DEPDC1-203ENST00000488146 AHDC1Q5TGY3 1603 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-203ENST00000488146 SHPRHQ149N8 1683 aa4.5□□□□□ -1.69
DEPDC1-203ENST00000488146 GCC2Q8IWJ2 1684 aa4.5□□□□□ -1.69
DEPDC1-203ENST00000488146 DCCP43146 1447 aa4.49□□□□□ -1.69
DEPDC1-203ENST00000488146 KCNH8Q96L42 1107 aa4.49□□□□□ -1.69
DEPDC1-203ENST00000488146 PIK3C2BO00750 1634 aa4.49□□□□□ -1.69
DEPDC1-203ENST00000488146 ADGRB3O60242 1522 aa4.49□□□□□ -1.69
DEPDC1-203ENST00000488146 NPHP4O75161 1426 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-203ENST00000488146 MIER1Q8N108 512 aa4.49□□□□□ -1.69
DEPDC1-203ENST00000488146 SPOCK2Q92563 424 aa4.49□□□□□ -1.69
DEPDC1-203ENST00000488146 CIZ1Q9ULV3 898 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-203ENST00000488146 UNC13BO14795 1591 aa4.48□□□□□ -1.69
DEPDC1-203ENST00000488146 CCNB3Q8WWL7 1395 aa4.48□□□□□ -1.69
DEPDC1-203ENST00000488146 SPAG9O60271 1321 aaKnown RBP4.48□□□□□ -1.69
DEPDC1-203ENST00000488146 ARID4BQ4LE39 1312 aaPredicted RBP4.48□□□□□ -1.69
DEPDC1-203ENST00000488146 TET3O43151 1660 aa4.48□□□□□ -1.69
DEPDC1-203ENST00000488146 ACIN1Q9UKV3 1341 aaKnown RBP4.48□□□□□ -1.69
DEPDC1-203ENST00000488146 GABBR2O75899 941 aa4.48□□□□□ -1.69
DEPDC1-203ENST00000488146 CHGAP10645 457 aaKnown RBP4.48□□□□□ -1.69
DEPDC1-203ENST00000488146 SCAF11Q99590 1463 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-203ENST00000488146 LRRC7Q96NW7 1537 aa4.47□□□□□ -1.69
DEPDC1-203ENST00000488146 XIRP1Q702N8 1843 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-203ENST00000488146 FARP1Q9Y4F1 1045 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-203ENST00000488146 MYOM3Q5VTT5 1437 aa4.47□□□□□ -1.69
DEPDC1-203ENST00000488146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.46□□□□□ -1.69
DEPDC1-203ENST00000488146 SETD1AO15047 1707 aaKnown RBP4.46□□□□□ -1.69
DEPDC1-203ENST00000488146 CEP152O94986 1710 aa4.46□□□□□ -1.69
DEPDC1-203ENST00000488146 VSIG10Q8N0Z9 540 aa4.46□□□□□ -1.7
DEPDC1-203ENST00000488146 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1-203ENST00000488146 NOS1P29475 1434 aa4.46□□□□□ -1.7
DEPDC1-203ENST00000488146 CD44P16070 742 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-203ENST00000488146 ESF1Q9H501 851 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-203ENST00000488146 TOM1O60784 492 aa4.45□□□□□ -1.7
DEPDC1-203ENST00000488146 THEMISQ8N1K5 641 aaPredicted RBP4.45□□□□□ -1.7
DEPDC1-203ENST00000488146 STRCP1A6NGW2 1772 aa4.45□□□□□ -1.7
DEPDC1-203ENST00000488146 BBXQ8WY36 941 aaPredicted RBP4.45□□□□□ -1.7
DEPDC1-203ENST00000488146 STAG3Q9UJ98 1225 aa4.45□□□□□ -1.7
DEPDC1-203ENST00000488146 SPHKAPQ2M3C7 1700 aa4.45□□□□□ -1.7
DEPDC1-203ENST00000488146 CHD2O14647 1828 aaKnown RBP4.45□□□□□ -1.7
DEPDC1-203ENST00000488146 SETBP1Q9Y6X0 1596 aa4.44□□□□□ -1.7
DEPDC1-203ENST00000488146 COL22A1Q8NFW1 1626 aaPredicted RBP4.44□□□□□ -1.7
DEPDC1-203ENST00000488146 DISP3Q9P2K9 1392 aa4.44□□□□□ -1.7
DEPDC1-203ENST00000488146 XRN1Q8IZH2 1706 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-203ENST00000488146 NHSL1Q5SYE7 1610 aa4.44□□□□□ -1.7
DEPDC1-203ENST00000488146 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-203ENST00000488146 TRPM2O94759 1503 aa4.43□□□□□ -1.7
DEPDC1-203ENST00000488146 ANKLE2Q86XL3 938 aa4.43□□□□□ -1.7
DEPDC1-203ENST00000488146 VPS8Q8N3P4 1428 aa4.43□□□□□ -1.7
DEPDC1-203ENST00000488146 COL16A1Q07092 1604 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-203ENST00000488146 ROCK1Q13464 1354 aa4.42□□□□□ -1.7
DEPDC1-203ENST00000488146 SPRYD3Q8NCJ5 442 aa4.42□□□□□ -1.7
DEPDC1-203ENST00000488146 MTUS2Q5JR59 1369 aa4.42□□□□□ -1.7
DEPDC1-203ENST00000488146 PLEKHG1Q9ULL1 1385 aa4.42□□□□□ -1.7
DEPDC1-203ENST00000488146 RNF25Q96BH1 459 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-203ENST00000488146 ZFYVE9O95405 1425 aa4.41□□□□□ -1.7
DEPDC1-203ENST00000488146 CREBZFQ9NS37 354 aa4.41□□□□□ -1.7
DEPDC1-203ENST00000488146 KANK1Q14678 1352 aa4.41□□□□□ -1.7
DEPDC1-203ENST00000488146 TMEM131LA2VDJ0 1609 aa4.41□□□□□ -1.7
DEPDC1-203ENST00000488146 SPATA31A6Q5VVP1 1343 aa4.41□□□□□ -1.7
DEPDC1-203ENST00000488146 KNDC1Q76NI1 1749 aa4.41□□□□□ -1.7
DEPDC1-203ENST00000488146 CLCN6P51797 869 aa4.4□□□□□ -1.7
DEPDC1-203ENST00000488146 CFDP1Q9UEE9 299 aaPredicted RBP4.4□□□□□ -1.7
DEPDC1-203ENST00000488146 TMEM2Q9UHN6 1383 aa4.4□□□□□ -1.7
DEPDC1-203ENST00000488146 AFAP1Q8N556 730 aa4.4□□□□□ -1.71
DEPDC1-203ENST00000488146 LRP5O75197 1615 aa4.4□□□□□ -1.71
DEPDC1-203ENST00000488146 HDGFP51858 240 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-203ENST00000488146 PHLPP1O60346 1717 aa4.39□□□□□ -1.71
DEPDC1-203ENST00000488146 ROBO1Q9Y6N7 1651 aa4.39□□□□□ -1.71
DEPDC1-203ENST00000488146 SLC52A1Q9NWF4 448 aa4.39□□□□□ -1.71
DEPDC1-203ENST00000488146 ZRANB1Q9UGI0 708 aa4.39□□□□□ -1.71
DEPDC1-203ENST00000488146 SETD5Q9C0A6 1442 aa4.39□□□□□ -1.71
DEPDC1-203ENST00000488146 LHX8Q68G74 356 aa4.39□□□□□ -1.71
DEPDC1-203ENST00000488146 JCADQ9P266 1359 aa4.38□□□□□ -1.71
DEPDC1-203ENST00000488146 PTCH1Q13635 1447 aa4.38□□□□□ -1.71
DEPDC1-203ENST00000488146 KCNA6P17658 529 aa4.38□□□□□ -1.71
DEPDC1-203ENST00000488146 HSPA2P54652 639 aa4.38□□□□□ -1.71
DEPDC1-203ENST00000488146 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.38□□□□□ -1.71
DEPDC1-203ENST00000488146 KIF1AQ12756 1690 aa4.38□□□□□ -1.71
DEPDC1-203ENST00000488146 DAPK1P53355 1430 aa4.38□□□□□ -1.71
DEPDC1-203ENST00000488146 NEXMIFQ5QGS0 1516 aa4.38□□□□□ -1.71
DEPDC1-203ENST00000488146 ZNF579Q8NAF0 562 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-203ENST00000488146 ANKRD30AQ9BXX3 1397 aa4.38□□□□□ -1.71
DEPDC1-203ENST00000488146 NKX1-1Q15270 411 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-203ENST00000488146 MARF1Q9Y4F3 1742 aaKnown RBP4.37□□□□□ -1.71
DEPDC1-203ENST00000488146 POTEIP0CG38 1075 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms