RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 FER1L4A9Z1Z3 1794 aa14.07□□□□□ -0.16
CD46-214ENST00000480003 EFCAB6Q5THR3 1501 aa14.07□□□□□ -0.16
CD46-214ENST00000480003 IDI1Q13907 227 aa14.07□□□□□ -0.16
CD46-214ENST00000480003 FBXO41Q8TF61 875 aa14.07□□□□□ -0.16
CD46-214ENST00000480003 SLC52A1Q9NWF4 448 aa14.07□□□□□ -0.16
CD46-214ENST00000480003 CAMSAP1Q5T5Y3 1602 aa14.06□□□□□ -0.16
CD46-214ENST00000480003 E9PCH4 1651 aa14.05□□□□□ -0.16
CD46-214ENST00000480003 RIMS1Q86UR5 1692 aaKnown RBP14.05□□□□□ -0.16
CD46-214ENST00000480003 SETD1BQ9UPS6 1966 aaKnown RBP14.05□□□□□ -0.16
CD46-214ENST00000480003 ERVK-7P63135 1459 aa14.05□□□□□ -0.16
CD46-214ENST00000480003 TNRQ92752 1358 aa14.04□□□□□ -0.16
CD46-214ENST00000480003 SPATA31D1Q6ZQQ2 1576 aa14.04□□□□□ -0.16
CD46-214ENST00000480003 CFAP65Q6ZU64 1925 aaKnown RBP14.03□□□□□ -0.16
CD46-214ENST00000480003 C3P01024 1663 aa14.03□□□□□ -0.16
CD46-214ENST00000480003 CLSPNQ9HAW4 1339 aa14.01□□□□□ -0.17
CD46-214ENST00000480003 SIN3AQ96ST3 1273 aa14.01□□□□□ -0.17
CD46-214ENST00000480003 CCER1Q8TC90 406 aaPredicted RBP13.99□□□□□ -0.17
CD46-214ENST00000480003 PREX1Q8TCU6 1659 aa13.98□□□□□ -0.17
CD46-214ENST00000480003 SYNMO15061 1565 aa13.98□□□□□ -0.17
CD46-214ENST00000480003 TRPM2O94759 1503 aa13.97□□□□□ -0.17
CD46-214ENST00000480003 NLRP1Q9C000 1473 aa13.97□□□□□ -0.17
CD46-214ENST00000480003 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
CD46-214ENST00000480003 CCDC144AA2RUR9 1427 aa13.96□□□□□ -0.18
CD46-214ENST00000480003 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
CD46-214ENST00000480003 NEUROD1Q13562 356 aa13.94□□□□□ -0.18
CD46-214ENST00000480003 SPHKAPQ2M3C7 1700 aa13.94□□□□□ -0.18
CD46-214ENST00000480003 UGGT1Q9NYU2 1555 aa13.94□□□□□ -0.18
CD46-214ENST00000480003 PIK3C2BO00750 1634 aa13.93□□□□□ -0.18
CD46-214ENST00000480003 A2ML1A8K2U0 1454 aa13.93□□□□□ -0.18
CD46-214ENST00000480003 LMTK3Q96Q04 1460 aa13.93□□□□□ -0.18
CD46-214ENST00000480003 SPATA31E1Q6ZUB1 1445 aa13.93□□□□□ -0.18
CD46-214ENST00000480003 CHGAP10645 457 aaKnown RBP13.93□□□□□ -0.18
CD46-214ENST00000480003 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
CD46-214ENST00000480003 UHRF1BP1Q6BDS2 1440 aa13.92□□□□□ -0.18
CD46-214ENST00000480003 PRKAR2AP13861 404 aaKnown RBP13.92□□□□□ -0.18
CD46-214ENST00000480003 RGL3Q3MIN7 710 aa13.92□□□□□ -0.18
CD46-214ENST00000480003 RPGRIP1LQ68CZ1 1315 aa13.91□□□□□ -0.18
CD46-214ENST00000480003 CLTCL1P53675 1640 aa13.91□□□□□ -0.18
CD46-214ENST00000480003 TIMELESSQ9UNS1 1208 aa13.9□□□□□ -0.18
CD46-214ENST00000480003 LTKP29376 864 aa13.89□□□□□ -0.19
CD46-214ENST00000480003 HDGFP51858 240 aaKnown RBP13.89□□□□□ -0.19
CD46-214ENST00000480003 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
CD46-214ENST00000480003 STAC3Q96MF2 364 aa13.89□□□□□ -0.19
CD46-214ENST00000480003 NEURL4Q96JN8 1562 aa13.88□□□□□ -0.19
CD46-214ENST00000480003 TMEM2Q9UHN6 1383 aa13.88□□□□□ -0.19
CD46-214ENST00000480003 HSPA2P54652 639 aa13.88□□□□□ -0.19
CD46-214ENST00000480003 ZNF326Q5BKZ1 582 aaKnown RBP13.88□□□□□ -0.19
CD46-214ENST00000480003 TMEM131LA2VDJ0 1609 aa13.88□□□□□ -0.19
CD46-214ENST00000480003 PRR29P0C7W0 189 aa13.87□□□□□ -0.19
CD46-214ENST00000480003 TXNDC2Q86VQ3 553 aa13.87□□□□□ -0.19
CD46-214ENST00000480003 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
CD46-214ENST00000480003 CEP170BQ9Y4F5 1589 aaPredicted RBP13.87□□□□□ -0.19
CD46-214ENST00000480003 ARHGAP23Q9P227 1491 aa13.87□□□□□ -0.19
CD46-214ENST00000480003 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
CD46-214ENST00000480003 ANKLE2Q86XL3 938 aa13.86□□□□□ -0.19
CD46-214ENST00000480003 DCAF11Q8TEB1 546 aa13.86□□□□□ -0.19
CD46-214ENST00000480003 MYO3AQ8NEV4 1616 aa13.86□□□□□ -0.19
CD46-214ENST00000480003 ADGRB3O60242 1522 aa13.85□□□□□ -0.19
CD46-214ENST00000480003 ZFYVE9O95405 1425 aa13.85□□□□□ -0.19
CD46-214ENST00000480003 KDM5AP29375 1690 aaKnown RBP13.85□□□□□ -0.19
CD46-214ENST00000480003 SLIT1O75093 1534 aa13.85□□□□□ -0.19
CD46-214ENST00000480003 UBR1Q8IWV7 1749 aa13.84□□□□□ -0.19
CD46-214ENST00000480003 RIMS2Q9UQ26 1411 aa13.84□□□□□ -0.19
CD46-214ENST00000480003 PPP1R15AO75807 674 aaPredicted RBP13.84□□□□□ -0.19
CD46-214ENST00000480003 NUTM2DQ5VT03 806 aaPredicted RBP13.84□□□□□ -0.19
CD46-214ENST00000480003 EID1Q9Y6B2 187 aa13.84□□□□□ -0.19
CD46-214ENST00000480003 KIF1BO60333 1816 aa13.83□□□□□ -0.2
CD46-214ENST00000480003 ZNF142P52746 1687 aaPredicted RBP13.83□□□□□ -0.2
CD46-214ENST00000480003 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
CD46-214ENST00000480003 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.2
CD46-214ENST00000480003 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
CD46-214ENST00000480003 HAX1O00165 279 aa13.82□□□□□ -0.2
CD46-214ENST00000480003 CHADLQ6NUI6 762 aa13.82□□□□□ -0.2
CD46-214ENST00000480003 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
CD46-214ENST00000480003 TONSLQ96HA7 1378 aa13.8□□□□□ -0.2
CD46-214ENST00000480003 NEXMIFQ5QGS0 1516 aa13.8□□□□□ -0.2
CD46-214ENST00000480003 MYO5BQ9ULV0 1848 aa13.79□□□□□ -0.2
CD46-214ENST00000480003 NBPF8Q3BBV2 869 aa13.79□□□□□ -0.2
CD46-214ENST00000480003 C14orf93Q9H972 538 aaKnown RBP13.79□□□□□ -0.2
CD46-214ENST00000480003 SP7Q8TDD2 431 aaPredicted RBP13.78□□□□□ -0.2
CD46-214ENST00000480003 PLEKHG1Q9ULL1 1385 aa13.78□□□□□ -0.2
CD46-214ENST00000480003 MED14O60244 1454 aa13.77□□□□□ -0.21
CD46-214ENST00000480003 SCAF11Q99590 1463 aaKnown RBP13.77□□□□□ -0.21
CD46-214ENST00000480003 NRXN1Q9ULB1 1477 aa13.77□□□□□ -0.21
CD46-214ENST00000480003 TBX22Q9Y458 520 aa13.77□□□□□ -0.21
CD46-214ENST00000480003 MYOM2P54296 1465 aa13.75□□□□□ -0.21
CD46-214ENST00000480003 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
CD46-214ENST00000480003 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
CD46-214ENST00000480003 ADAMTS13Q76LX8 1427 aa13.73□□□□□ -0.21
CD46-214ENST00000480003 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
CD46-214ENST00000480003 PPLO60437 1756 aa13.73□□□□□ -0.21
CD46-214ENST00000480003 SLC26A8Q96RN1 970 aa13.73□□□□□ -0.21
CD46-214ENST00000480003 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
CD46-214ENST00000480003 NBPF1Q3BBV0 1214 aa13.72□□□□□ -0.21
CD46-214ENST00000480003 BCANQ96GW7 911 aa13.72□□□□□ -0.21
CD46-214ENST00000480003 STRCQ7RTU9 1775 aa13.71□□□□□ -0.21
CD46-214ENST00000480003 IFT172Q9UG01 1749 aa13.71□□□□□ -0.21
CD46-214ENST00000480003 ZEB1P37275 1124 aaPredicted RBP13.71□□□□□ -0.21
CD46-214ENST00000480003 EVX2Q03828 476 aa13.7□□□□□ -0.22
CD46-214ENST00000480003 TMEM132EQ6IEE7 984 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms