RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 FRMPD1Q5SYB0 1578 aa18.07■□□□□ 0.48
HDAC7-221ENST00000477203 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
HDAC7-221ENST00000477203 IDI1Q13907 227 aa18.06■□□□□ 0.48
HDAC7-221ENST00000477203 KNSTRNQ9Y448 316 aa18.06■□□□□ 0.48
HDAC7-221ENST00000477203 EFCAB6Q5THR3 1501 aa18.05■□□□□ 0.48
HDAC7-221ENST00000477203 MLH3Q9UHC1 1453 aa18.05■□□□□ 0.48
HDAC7-221ENST00000477203 STAG3Q9UJ98 1225 aa18.05■□□□□ 0.48
HDAC7-221ENST00000477203 MADDQ8WXG6 1647 aa18.05■□□□□ 0.48
HDAC7-221ENST00000477203 TNNT2P45379 298 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-221ENST00000477203 COL17A1Q9UMD9 1497 aaPredicted RBP18.04■□□□□ 0.48
HDAC7-221ENST00000477203 RALBP1Q15311 655 aa18.03■□□□□ 0.48
HDAC7-221ENST00000477203 VWDEQ8N2E2 1590 aa18.03■□□□□ 0.48
HDAC7-221ENST00000477203 EIF2AK4Q9P2K8 1649 aaKnown RBP18.03■□□□□ 0.48
HDAC7-221ENST00000477203 RBM19Q9Y4C8 960 aaKnown RBP18.03■□□□□ 0.48
HDAC7-221ENST00000477203 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.48
HDAC7-221ENST00000477203 KIF1BO60333 1816 aa18.02■□□□□ 0.48
HDAC7-221ENST00000477203 RNF17Q9BXT8 1623 aaKnown RBP18.02■□□□□ 0.48
HDAC7-221ENST00000477203 MROH2AA6NES4 1674 aa18.02■□□□□ 0.47
HDAC7-221ENST00000477203 NEO1Q92859 1461 aa18.01■□□□□ 0.47
HDAC7-221ENST00000477203 NLRP13Q86W25 1043 aa18.01■□□□□ 0.47
HDAC7-221ENST00000477203 CFAP74Q9C0B2 1584 aa18■□□□□ 0.47
HDAC7-221ENST00000477203 SCAF11Q99590 1463 aaKnown RBP18■□□□□ 0.47
HDAC7-221ENST00000477203 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
HDAC7-221ENST00000477203 DIP2CQ9Y2E4 1556 aa17.98■□□□□ 0.47
HDAC7-221ENST00000477203 ABCC3O15438 1527 aa17.98■□□□□ 0.47
HDAC7-221ENST00000477203 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
HDAC7-221ENST00000477203 SLC12A5Q9H2X9 1139 aa17.96■□□□□ 0.47
HDAC7-221ENST00000477203 CENPJQ9HC77 1338 aaPredicted RBP17.95■□□□□ 0.46
HDAC7-221ENST00000477203 EIF3AQ14152 1382 aaKnown RBP17.95■□□□□ 0.46
HDAC7-221ENST00000477203 B4GALNT3Q6L9W6 998 aa17.94■□□□□ 0.46
HDAC7-221ENST00000477203 RICTORQ6R327 1708 aa17.94■□□□□ 0.46
HDAC7-221ENST00000477203 CDCA8Q53HL2 280 aa17.94■□□□□ 0.46
HDAC7-221ENST00000477203 BRD4O60885 1362 aaPredicted RBP17.93■□□□□ 0.46
HDAC7-221ENST00000477203 PARD3Q8TEW0 1356 aa17.93■□□□□ 0.46
HDAC7-221ENST00000477203 CDCA7LQ96GN5 454 aa17.93■□□□□ 0.46
HDAC7-221ENST00000477203 MAP3K4Q9Y6R4 1608 aa17.93■□□□□ 0.46
HDAC7-221ENST00000477203 SIGLEC1Q9BZZ2 1709 aa17.93■□□□□ 0.46
HDAC7-221ENST00000477203 CCDC146Q8IYE0 955 aa17.92■□□□□ 0.46
HDAC7-221ENST00000477203 ESF1Q9H501 851 aaKnown RBP17.92■□□□□ 0.46
HDAC7-221ENST00000477203 C14orf93Q9H972 538 aaKnown RBP17.92■□□□□ 0.46
HDAC7-221ENST00000477203 CABP2Q9NPB3 220 aa17.92■□□□□ 0.46
HDAC7-221ENST00000477203 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
HDAC7-221ENST00000477203 ADAMTS8Q9UP79 889 aa17.91■□□□□ 0.46
HDAC7-221ENST00000477203 VGFO15240 615 aaPredicted RBP17.91■□□□□ 0.46
HDAC7-221ENST00000477203 MSH5O43196 834 aa17.91■□□□□ 0.46
HDAC7-221ENST00000477203 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
HDAC7-221ENST00000477203 AMER1Q5JTC6 1135 aaPredicted RBP17.91■□□□□ 0.46
HDAC7-221ENST00000477203 DIP2BQ9P265 1576 aa17.9■□□□□ 0.46
HDAC7-221ENST00000477203 IQGAP1P46940 1657 aa17.9■□□□□ 0.46
HDAC7-221ENST00000477203 STAC3Q96MF2 364 aa17.9■□□□□ 0.46
HDAC7-221ENST00000477203 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.46
HDAC7-221ENST00000477203 CAMSAP1Q5T5Y3 1602 aa17.89■□□□□ 0.45
HDAC7-221ENST00000477203 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
HDAC7-221ENST00000477203 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.45
HDAC7-221ENST00000477203 LAMC1P11047 1609 aa17.88■□□□□ 0.45
HDAC7-221ENST00000477203 LMTK2Q8IWU2 1503 aa17.87■□□□□ 0.45
HDAC7-221ENST00000477203 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
HDAC7-221ENST00000477203 SRPK2P78362 688 aaKnown RBP17.87■□□□□ 0.45
HDAC7-221ENST00000477203 ADGRB3O60242 1522 aa17.86■□□□□ 0.45
HDAC7-221ENST00000477203 SYNMO15061 1565 aa17.86■□□□□ 0.45
HDAC7-221ENST00000477203 POGKQ9P215 609 aa17.85■□□□□ 0.45
HDAC7-221ENST00000477203 ERVK-7P63135 1459 aa17.85■□□□□ 0.45
HDAC7-221ENST00000477203 MYO5BQ9ULV0 1848 aa17.85■□□□□ 0.45
HDAC7-221ENST00000477203 MYOM2P54296 1465 aa17.84■□□□□ 0.45
HDAC7-221ENST00000477203 SLC52A1Q9NWF4 448 aa17.84■□□□□ 0.45
HDAC7-221ENST00000477203 PIK3C2GO75747 1445 aa17.83■□□□□ 0.45
HDAC7-221ENST00000477203 PRAM1Q96QH2 718 aa17.83■□□□□ 0.44
HDAC7-221ENST00000477203 LRPPRCP42704 1394 aaKnown RBP17.83■□□□□ 0.44
HDAC7-221ENST00000477203 CEBPAP49715 358 aaPredicted RBP17.83■□□□□ 0.44
HDAC7-221ENST00000477203 CCDC136Q96JN2 1154 aa17.82■□□□□ 0.44
HDAC7-221ENST00000477203 NEUROD2Q15784 382 aa17.82■□□□□ 0.44
HDAC7-221ENST00000477203 PLIN1O60240 522 aa17.81■□□□□ 0.44
HDAC7-221ENST00000477203 WAPLQ7Z5K2 1190 aa17.81■□□□□ 0.44
HDAC7-221ENST00000477203 PPLO60437 1756 aa17.8■□□□□ 0.44
HDAC7-221ENST00000477203 MORC1Q86VD1 984 aa17.8■□□□□ 0.44
HDAC7-221ENST00000477203 RPGRIP1LQ68CZ1 1315 aa17.8■□□□□ 0.44
HDAC7-221ENST00000477203 IFT172Q9UG01 1749 aa17.8■□□□□ 0.44
HDAC7-221ENST00000477203 GLI2P10070 1586 aa17.79■□□□□ 0.44
HDAC7-221ENST00000477203 KDM5AP29375 1690 aaKnown RBP17.78■□□□□ 0.44
HDAC7-221ENST00000477203 NSD3Q9BZ95 1437 aa17.78■□□□□ 0.44
HDAC7-221ENST00000477203 DEKP35659 375 aaKnown RBP17.77■□□□□ 0.44
HDAC7-221ENST00000477203 SMG6Q86US8 1419 aaKnown RBP17.77■□□□□ 0.44
HDAC7-221ENST00000477203 PPP4R2Q9NY27 417 aa17.76■□□□□ 0.43
HDAC7-221ENST00000477203 ASXL1Q8IXJ9 1541 aa17.76■□□□□ 0.43
HDAC7-221ENST00000477203 APAF1O14727 1248 aa17.76■□□□□ 0.43
HDAC7-221ENST00000477203 PIK3C2BO00750 1634 aa17.75■□□□□ 0.43
HDAC7-221ENST00000477203 EVC2Q86UK5 1308 aa17.75■□□□□ 0.43
HDAC7-221ENST00000477203 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
HDAC7-221ENST00000477203 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
HDAC7-221ENST00000477203 MYOM1P52179 1685 aa17.75■□□□□ 0.43
HDAC7-221ENST00000477203 CLTCQ00610 1675 aaKnown RBP17.75■□□□□ 0.43
HDAC7-221ENST00000477203 NRXN1Q9ULB1 1477 aa17.75■□□□□ 0.43
HDAC7-221ENST00000477203 NEXMIFQ5QGS0 1516 aa17.74■□□□□ 0.43
HDAC7-221ENST00000477203 GGNBP2Q9H3C7 697 aa17.74■□□□□ 0.43
HDAC7-221ENST00000477203 RCAN3Q9UKA8 241 aa17.74■□□□□ 0.43
HDAC7-221ENST00000477203 PREX1Q8TCU6 1659 aa17.74■□□□□ 0.43
HDAC7-221ENST00000477203 KIAA1210Q9ULL0 1709 aa17.74■□□□□ 0.43
HDAC7-221ENST00000477203 FBLN1P23142 703 aa17.73■□□□□ 0.43
HDAC7-221ENST00000477203 ADGRB1O14514 1584 aa17.73■□□□□ 0.43
HDAC7-221ENST00000477203 QRICH2Q9H0J4 1663 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms