RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 NEO1Q92859 1461 aa12.73□□□□□ -0.37
LDHB-206ENST00000470985 AKNAQ7Z591 1439 aa12.73□□□□□ -0.37
LDHB-206ENST00000470985 ZNF687Q8N1G0 1237 aa12.73□□□□□ -0.37
LDHB-206ENST00000470985 IGF1RP08069 1367 aa12.72□□□□□ -0.37
LDHB-206ENST00000470985 NUDT7P0C024 238 aa12.72□□□□□ -0.37
LDHB-206ENST00000470985 SPNS2Q8IVW8 549 aa12.72□□□□□ -0.37
LDHB-206ENST00000470985 GTPBP6O43824 516 aaPredicted RBP12.71□□□□□ -0.37
LDHB-206ENST00000470985 KHSRPQ92945 711 aaKnown RBP eCLIP12.71□□□□□ -0.37
LDHB-206ENST00000470985 KIAA0556O60303 1618 aa12.7□□□□□ -0.38
LDHB-206ENST00000470985 PSDA5PKW4 1024 aaPredicted RBP12.7□□□□□ -0.38
LDHB-206ENST00000470985 POTEAQ6S8J7 498 aa12.7□□□□□ -0.38
LDHB-206ENST00000470985 ABCA9Q8IUA7 1624 aa12.7□□□□□ -0.38
LDHB-206ENST00000470985 RICTORQ6R327 1708 aa12.68□□□□□ -0.38
LDHB-206ENST00000470985 ZFYVE16Q7Z3T8 1539 aa12.68□□□□□ -0.38
LDHB-206ENST00000470985 DSG2Q14126 1118 aa12.68□□□□□ -0.38
LDHB-206ENST00000470985 PTCD2Q8WV60 388 aaKnown RBP12.67□□□□□ -0.38
LDHB-206ENST00000470985 RTN4Q9NQC3 1192 aaKnown RBP12.67□□□□□ -0.38
LDHB-206ENST00000470985 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.67□□□□□ -0.38
LDHB-206ENST00000470985 DENND4BO75064 1496 aaPredicted RBP12.66□□□□□ -0.38
LDHB-206ENST00000470985 BBXQ8WY36 941 aaPredicted RBP12.66□□□□□ -0.38
LDHB-206ENST00000470985 KRTAP3-3Q9BYR6 98 aa12.66□□□□□ -0.38
LDHB-206ENST00000470985 KRTAP3-2Q9BYR7 98 aa12.66□□□□□ -0.38
LDHB-206ENST00000470985 ABCA8O94911 1581 aa12.65□□□□□ -0.38
LDHB-206ENST00000470985 FHOD3Q2V2M9 1422 aa12.65□□□□□ -0.38
LDHB-206ENST00000470985 MMRN1Q13201 1228 aa12.65□□□□□ -0.38
LDHB-206ENST00000470985 UGGT2Q9NYU1 1516 aa12.65□□□□□ -0.38
LDHB-206ENST00000470985 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
LDHB-206ENST00000470985 ZMYM4Q5VZL5 1548 aa12.64□□□□□ -0.39
LDHB-206ENST00000470985 ARID3CA6NKF2 412 aa12.64□□□□□ -0.39
LDHB-206ENST00000470985 LHX6Q9UPM6 363 aa12.64□□□□□ -0.39
LDHB-206ENST00000470985 CAMSAP1Q5T5Y3 1602 aa12.63□□□□□ -0.39
LDHB-206ENST00000470985 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
LDHB-206ENST00000470985 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
LDHB-206ENST00000470985 TOM1O60784 492 aa12.62□□□□□ -0.39
LDHB-206ENST00000470985 PPP1R15BQ5SWA1 713 aa12.62□□□□□ -0.39
LDHB-206ENST00000470985 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
LDHB-206ENST00000470985 ANKRD13DQ6ZTN6 518 aa12.61□□□□□ -0.39
LDHB-206ENST00000470985 CRISPLD2Q9H0B8 497 aa12.61□□□□□ -0.39
LDHB-206ENST00000470985 PBX2P40425 430 aa12.6□□□□□ -0.39
LDHB-206ENST00000470985 DDX27Q96GQ7 796 aaKnown RBP12.6□□□□□ -0.39
LDHB-206ENST00000470985 SETD1BQ9UPS6 1966 aaKnown RBP12.6□□□□□ -0.39
LDHB-206ENST00000470985 CARMIL1Q5VZK9 1371 aa12.59□□□□□ -0.39
LDHB-206ENST00000470985 UPF1Q92900 1129 aaKnown RBP eCLIP12.59□□□□□ -0.39
LDHB-206ENST00000470985 PTGER2P43116 358 aa12.57□□□□□ -0.4
LDHB-206ENST00000470985 HECW1Q76N89 1606 aa12.57□□□□□ -0.4
LDHB-206ENST00000470985 C3P01024 1663 aa12.57□□□□□ -0.4
LDHB-206ENST00000470985 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
LDHB-206ENST00000470985 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
LDHB-206ENST00000470985 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
LDHB-206ENST00000470985 TRAPPC8Q9Y2L5 1435 aa12.54□□□□□ -0.4
LDHB-206ENST00000470985 ATP10BO94823 1461 aa12.54□□□□□ -0.4
LDHB-206ENST00000470985 MAGI2Q86UL8 1455 aa12.54□□□□□ -0.4
LDHB-206ENST00000470985 KIF27Q86VH2 1401 aa12.54□□□□□ -0.4
LDHB-206ENST00000470985 MAP3K9P80192 1104 aa12.52□□□□□ -0.41
LDHB-206ENST00000470985 LSM11P83369 360 aaKnown RBP eCLIP12.52□□□□□ -0.41
LDHB-206ENST00000470985 OXER1Q8TDS5 423 aa12.52□□□□□ -0.41
LDHB-206ENST00000470985 ATP10AO60312 1499 aa12.52□□□□□ -0.41
LDHB-206ENST00000470985 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
LDHB-206ENST00000470985 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
LDHB-206ENST00000470985 TCOF1Q13428 1488 aaKnown RBP12.5□□□□□ -0.41
LDHB-206ENST00000470985 CPS1P31327 1500 aa12.49□□□□□ -0.41
LDHB-206ENST00000470985 PTPRKQ15262 1439 aa12.49□□□□□ -0.41
LDHB-206ENST00000470985 STAC3Q96MF2 364 aa12.49□□□□□ -0.41
LDHB-206ENST00000470985 RNF166Q96A37 237 aaPredicted RBP12.47□□□□□ -0.41
LDHB-206ENST00000470985 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
LDHB-206ENST00000470985 PLA2R1Q13018 1463 aa12.46□□□□□ -0.41
LDHB-206ENST00000470985 MFSD10Q14728 455 aa12.45□□□□□ -0.42
LDHB-206ENST00000470985 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
LDHB-206ENST00000470985 SHANK2Q9UPX8 1470 aa12.45□□□□□ -0.42
LDHB-206ENST00000470985 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
LDHB-206ENST00000470985 ZNF454Q8N9F8 522 aa12.44□□□□□ -0.42
LDHB-206ENST00000470985 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
LDHB-206ENST00000470985 EVI5O60447 810 aa12.43□□□□□ -0.42
LDHB-206ENST00000470985 PAXIP1Q6ZW49 1069 aaPredicted RBP12.42□□□□□ -0.42
LDHB-206ENST00000470985 SCAPERQ9BY12 1400 aa12.4□□□□□ -0.42
LDHB-206ENST00000470985 WDR70Q9NW82 654 aa12.4□□□□□ -0.42
LDHB-206ENST00000470985 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
LDHB-206ENST00000470985 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
LDHB-206ENST00000470985 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
LDHB-206ENST00000470985 NPATQ14207 1427 aa12.38□□□□□ -0.43
LDHB-206ENST00000470985 MYO3AQ8NEV4 1616 aa12.38□□□□□ -0.43
LDHB-206ENST00000470985 KCNK17Q96T54 332 aa12.38□□□□□ -0.43
LDHB-206ENST00000470985 GOLGA3Q08378 1498 aa12.38□□□□□ -0.43
LDHB-206ENST00000470985 ZNF142P52746 1687 aaPredicted RBP12.38□□□□□ -0.43
LDHB-206ENST00000470985 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
LDHB-206ENST00000470985 ANO8Q9HCE9 1232 aaPredicted RBP12.37□□□□□ -0.43
LDHB-206ENST00000470985 VWDEQ8N2E2 1590 aa12.37□□□□□ -0.43
LDHB-206ENST00000470985 CEP170BQ9Y4F5 1589 aaPredicted RBP12.37□□□□□ -0.43
LDHB-206ENST00000470985 NEURL4Q96JN8 1562 aa12.36□□□□□ -0.43
LDHB-206ENST00000470985 SETBP1Q9Y6X0 1596 aa12.36□□□□□ -0.43
LDHB-206ENST00000470985 TK2O00142 265 aa12.36□□□□□ -0.43
LDHB-206ENST00000470985 PTPREP23469 700 aa12.36□□□□□ -0.43
LDHB-206ENST00000470985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.36□□□□□ -0.43
LDHB-206ENST00000470985 LRRC7Q96NW7 1537 aa12.36□□□□□ -0.43
LDHB-206ENST00000470985 PSEN2P49810 448 aa12.35□□□□□ -0.43
LDHB-206ENST00000470985 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
LDHB-206ENST00000470985 DIP2CQ9Y2E4 1556 aa12.35□□□□□ -0.43
LDHB-206ENST00000470985 RNF17Q9BXT8 1623 aaKnown RBP12.34□□□□□ -0.43
LDHB-206ENST00000470985 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
LDHB-206ENST00000470985 AGLP35573 1532 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms