RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 NUP155O75694 1391 aa16.89■□□□□ 0.29
COL4A6-205ENST00000468338 ARHGAP23Q9P227 1491 aa16.88■□□□□ 0.29
COL4A6-205ENST00000468338 SLC52A1Q9NWF4 448 aa16.88■□□□□ 0.29
COL4A6-205ENST00000468338 SLIT1O75093 1534 aa16.87■□□□□ 0.29
COL4A6-205ENST00000468338 FBXO3Q9UK99 471 aa16.87■□□□□ 0.29
COL4A6-205ENST00000468338 PIK3C2BO00750 1634 aa16.87■□□□□ 0.29
COL4A6-205ENST00000468338 E9PCH4 1651 aa16.87■□□□□ 0.29
COL4A6-205ENST00000468338 FBXO41Q8TF61 875 aa16.86■□□□□ 0.29
COL4A6-205ENST00000468338 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.28
COL4A6-205ENST00000468338 TMEM2Q9UHN6 1383 aa16.83■□□□□ 0.28
COL4A6-205ENST00000468338 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
COL4A6-205ENST00000468338 ZNF335Q9H4Z2 1342 aaPredicted RBP16.82■□□□□ 0.28
COL4A6-205ENST00000468338 LTKP29376 864 aa16.82■□□□□ 0.28
COL4A6-205ENST00000468338 ADGRB3O60242 1522 aa16.8■□□□□ 0.28
COL4A6-205ENST00000468338 SPDYE4A6NLX3 237 aa16.8■□□□□ 0.28
COL4A6-205ENST00000468338 TXNDC2Q86VQ3 553 aa16.8■□□□□ 0.28
COL4A6-205ENST00000468338 IQGAP1P46940 1657 aa16.8■□□□□ 0.28
COL4A6-205ENST00000468338 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
COL4A6-205ENST00000468338 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
COL4A6-205ENST00000468338 TMEM131LA2VDJ0 1609 aa16.78■□□□□ 0.28
COL4A6-205ENST00000468338 EID1Q9Y6B2 187 aa16.77■□□□□ 0.28
COL4A6-205ENST00000468338 MYO5BQ9ULV0 1848 aa16.75■□□□□ 0.27
COL4A6-205ENST00000468338 ZFYVE9O95405 1425 aa16.75■□□□□ 0.27
COL4A6-205ENST00000468338 SPHKAPQ2M3C7 1700 aa16.74■□□□□ 0.27
COL4A6-205ENST00000468338 CPS1P31327 1500 aa16.73■□□□□ 0.27
COL4A6-205ENST00000468338 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
COL4A6-205ENST00000468338 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
COL4A6-205ENST00000468338 TRPM2O94759 1503 aa16.7■□□□□ 0.26
COL4A6-205ENST00000468338 RIMS2Q9UQ26 1411 aa16.7■□□□□ 0.26
COL4A6-205ENST00000468338 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
COL4A6-205ENST00000468338 HDGFP51858 240 aaKnown RBP16.69■□□□□ 0.26
COL4A6-205ENST00000468338 SETD5Q9C0A6 1442 aa16.68■□□□□ 0.26
COL4A6-205ENST00000468338 PLEKHG1Q9ULL1 1385 aa16.67■□□□□ 0.26
COL4A6-205ENST00000468338 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL4A6-205ENST00000468338 CLTCL1P53675 1640 aa16.67■□□□□ 0.26
COL4A6-205ENST00000468338 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
COL4A6-205ENST00000468338 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
COL4A6-205ENST00000468338 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
COL4A6-205ENST00000468338 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.25
COL4A6-205ENST00000468338 SLC26A8Q96RN1 970 aa16.63■□□□□ 0.25
COL4A6-205ENST00000468338 KCNA6P17658 529 aa16.62■□□□□ 0.25
COL4A6-205ENST00000468338 TBX22Q9Y458 520 aa16.62■□□□□ 0.25
COL4A6-205ENST00000468338 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
COL4A6-205ENST00000468338 ADAMTS13Q76LX8 1427 aa16.62■□□□□ 0.25
COL4A6-205ENST00000468338 HRCP23327 699 aa16.61■□□□□ 0.25
COL4A6-205ENST00000468338 KIF1BO60333 1816 aa16.61■□□□□ 0.25
COL4A6-205ENST00000468338 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
COL4A6-205ENST00000468338 NWD1Q149M9 1564 aa16.6■□□□□ 0.25
COL4A6-205ENST00000468338 UBAP1LF5GYI3 381 aa16.59■□□□□ 0.25
COL4A6-205ENST00000468338 NUTM2DQ5VT03 806 aaPredicted RBP16.58■□□□□ 0.24
COL4A6-205ENST00000468338 PROM2Q8N271 834 aa16.58■□□□□ 0.24
COL4A6-205ENST00000468338 NEXMIFQ5QGS0 1516 aa16.58■□□□□ 0.24
COL4A6-205ENST00000468338 ALKQ9UM73 1620 aa16.58■□□□□ 0.24
COL4A6-205ENST00000468338 CHD2O14647 1828 aaKnown RBP16.58■□□□□ 0.24
COL4A6-205ENST00000468338 XIRP1Q702N8 1843 aaKnown RBP16.58■□□□□ 0.24
COL4A6-205ENST00000468338 DIP2AQ14689 1571 aa16.57■□□□□ 0.24
COL4A6-205ENST00000468338 PIK3R4Q99570 1358 aa16.57■□□□□ 0.24
COL4A6-205ENST00000468338 NRXN3Q9Y4C0 1643 aa16.56■□□□□ 0.24
COL4A6-205ENST00000468338 SETBP1Q9Y6X0 1596 aa16.56■□□□□ 0.24
COL4A6-205ENST00000468338 NKTRP30414 1462 aaKnown RBP16.56■□□□□ 0.24
COL4A6-205ENST00000468338 BCANQ96GW7 911 aa16.56■□□□□ 0.24
COL4A6-205ENST00000468338 RPGRIP1LQ68CZ1 1315 aa16.55■□□□□ 0.24
COL4A6-205ENST00000468338 TOM1O60784 492 aa16.55■□□□□ 0.24
COL4A6-205ENST00000468338 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
COL4A6-205ENST00000468338 POLA2Q14181 598 aa16.54■□□□□ 0.24
COL4A6-205ENST00000468338 CCDC144AA2RUR9 1427 aa16.53■□□□□ 0.24
COL4A6-205ENST00000468338 SPATA31E1Q6ZUB1 1445 aa16.53■□□□□ 0.24
COL4A6-205ENST00000468338 TMEM94Q12767 1356 aa16.53■□□□□ 0.24
COL4A6-205ENST00000468338 VASPP50552 380 aaPredicted RBP16.53■□□□□ 0.24
COL4A6-205ENST00000468338 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
COL4A6-205ENST00000468338 VGFO15240 615 aaPredicted RBP16.51■□□□□ 0.23
COL4A6-205ENST00000468338 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
COL4A6-205ENST00000468338 CAPN15O75808 1086 aa16.5■□□□□ 0.23
COL4A6-205ENST00000468338 PPLO60437 1756 aa16.5■□□□□ 0.23
COL4A6-205ENST00000468338 PTPRUQ92729 1446 aa16.5■□□□□ 0.23
COL4A6-205ENST00000468338 NCOA3Q9Y6Q9 1424 aa16.49■□□□□ 0.23
COL4A6-205ENST00000468338 METP08581 1390 aa16.48■□□□□ 0.23
COL4A6-205ENST00000468338 ANKRD30BQ9BXX2 1392 aa16.48■□□□□ 0.23
COL4A6-205ENST00000468338 AMOTL2Q9Y2J4 779 aa16.47■□□□□ 0.23
COL4A6-205ENST00000468338 SETD1AO15047 1707 aaKnown RBP16.46■□□□□ 0.23
COL4A6-205ENST00000468338 XRN1Q8IZH2 1706 aaKnown RBP16.46■□□□□ 0.23
COL4A6-205ENST00000468338 RBM33Q96EV2 1170 aaKnown RBP16.46■□□□□ 0.23
COL4A6-205ENST00000468338 PIP4K2BP78356 416 aa16.45■□□□□ 0.22
COL4A6-205ENST00000468338 IFT172Q9UG01 1749 aa16.45■□□□□ 0.22
COL4A6-205ENST00000468338 RGL3Q3MIN7 710 aa16.43■□□□□ 0.22
COL4A6-205ENST00000468338 ADGRF5Q8IZF2 1346 aa16.43■□□□□ 0.22
COL4A6-205ENST00000468338 MSH6P52701 1360 aa16.42■□□□□ 0.22
COL4A6-205ENST00000468338 HSPA1LP34931 641 aa16.42■□□□□ 0.22
COL4A6-205ENST00000468338 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
COL4A6-205ENST00000468338 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
COL4A6-205ENST00000468338 PRAG1Q86YV5 1406 aa16.42■□□□□ 0.22
COL4A6-205ENST00000468338 C19orf44Q9H6X5 657 aa16.4■□□□□ 0.22
COL4A6-205ENST00000468338 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
COL4A6-205ENST00000468338 NRXN1Q9ULB1 1477 aa16.39■□□□□ 0.21
COL4A6-205ENST00000468338 PIK3C2GO75747 1445 aa16.38■□□□□ 0.21
COL4A6-205ENST00000468338 MYOM2P54296 1465 aa16.37■□□□□ 0.21
COL4A6-205ENST00000468338 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.37■□□□□ 0.21
COL4A6-205ENST00000468338 SLAIN2Q9P270 581 aa16.37■□□□□ 0.21
COL4A6-205ENST00000468338 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
COL4A6-205ENST00000468338 DCCP43146 1447 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms