RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 MADDQ8WXG6 1647 aa9.44□□□□□ -0.9
MSH2-204ENST00000461394 LAMC1P11047 1609 aa9.43□□□□□ -0.9
MSH2-204ENST00000461394 SPATA31E1Q6ZUB1 1445 aa9.43□□□□□ -0.9
MSH2-204ENST00000461394 CLTCQ00610 1675 aaKnown RBP9.42□□□□□ -0.9
MSH2-204ENST00000461394 ARHGEF40Q8TER5 1519 aa9.42□□□□□ -0.9
MSH2-204ENST00000461394 CNTLNQ9NXG0 1405 aa9.42□□□□□ -0.9
MSH2-204ENST00000461394 IFT172Q9UG01 1749 aa9.42□□□□□ -0.9
MSH2-204ENST00000461394 NPATQ14207 1427 aa9.41□□□□□ -0.9
MSH2-204ENST00000461394 KIF7Q2M1P5 1343 aa9.41□□□□□ -0.9
MSH2-204ENST00000461394 TRHP20396 242 aaPredicted RBP9.41□□□□□ -0.9
MSH2-204ENST00000461394 MLECQ14165 292 aa9.41□□□□□ -0.9
MSH2-204ENST00000461394 ESF1Q9H501 851 aaKnown RBP9.41□□□□□ -0.9
MSH2-204ENST00000461394 SIGLEC1Q9BZZ2 1709 aa9.41□□□□□ -0.9
MSH2-204ENST00000461394 PREX1Q8TCU6 1659 aa9.41□□□□□ -0.9
MSH2-204ENST00000461394 REREQ9P2R6 1566 aa9.41□□□□□ -0.9
MSH2-204ENST00000461394 ST20-MTHFSA0A0A6YYL1 179 aa9.4□□□□□ -0.9
MSH2-204ENST00000461394 C11orf95C9JLR9 678 aaPredicted RBP9.4□□□□□ -0.9
MSH2-204ENST00000461394 NEURL4Q96JN8 1562 aa9.4□□□□□ -0.9
MSH2-204ENST00000461394 PPLO60437 1756 aa9.4□□□□□ -0.91
MSH2-204ENST00000461394 KIAA1210Q9ULL0 1709 aa9.39□□□□□ -0.91
MSH2-204ENST00000461394 ARID4BQ4LE39 1312 aaPredicted RBP9.39□□□□□ -0.91
MSH2-204ENST00000461394 NBPF1Q3BBV0 1214 aa9.39□□□□□ -0.91
MSH2-204ENST00000461394 VSIG10Q8N0Z9 540 aa9.39□□□□□ -0.91
MSH2-204ENST00000461394 STAC3Q96MF2 364 aa9.39□□□□□ -0.91
MSH2-204ENST00000461394 ATF5Q9Y2D1 282 aaPredicted RBP9.39□□□□□ -0.91
MSH2-204ENST00000461394 ADGRB3O60242 1522 aa9.39□□□□□ -0.91
MSH2-204ENST00000461394 AGLP35573 1532 aa9.38□□□□□ -0.91
MSH2-204ENST00000461394 SAMD1Q6SPF0 538 aaPredicted RBP9.38□□□□□ -0.91
MSH2-204ENST00000461394 TAOK2Q9UL54 1235 aa9.38□□□□□ -0.91
MSH2-204ENST00000461394 IQGAP1P46940 1657 aa9.38□□□□□ -0.91
MSH2-204ENST00000461394 MYO5BQ9ULV0 1848 aa9.38□□□□□ -0.91
MSH2-204ENST00000461394 SYNMO15061 1565 aa9.37□□□□□ -0.91
MSH2-204ENST00000461394 MYOM2P54296 1465 aa9.37□□□□□ -0.91
MSH2-204ENST00000461394 CNGB1Q14028 1251 aaPredicted RBP9.37□□□□□ -0.91
MSH2-204ENST00000461394 NOS1P29475 1434 aa9.37□□□□□ -0.91
MSH2-204ENST00000461394 GPRASP1Q5JY77 1395 aa9.37□□□□□ -0.91
MSH2-204ENST00000461394 PIK3C2BO00750 1634 aa9.36□□□□□ -0.91
MSH2-204ENST00000461394 CCER2I3L3R5 266 aa9.36□□□□□ -0.91
MSH2-204ENST00000461394 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
MSH2-204ENST00000461394 STAG3Q9UJ98 1225 aa9.36□□□□□ -0.91
MSH2-204ENST00000461394 ARHGAP31Q2M1Z3 1444 aa9.36□□□□□ -0.91
MSH2-204ENST00000461394 EIF3AQ14152 1382 aaKnown RBP9.36□□□□□ -0.91
MSH2-204ENST00000461394 COL17A1Q9UMD9 1497 aaPredicted RBP9.35□□□□□ -0.91
MSH2-204ENST00000461394 TMF1P82094 1093 aa9.34□□□□□ -0.91
MSH2-204ENST00000461394 SCAF11Q99590 1463 aaKnown RBP9.34□□□□□ -0.91
MSH2-204ENST00000461394 RPGRIP1LQ68CZ1 1315 aa9.33□□□□□ -0.92
MSH2-204ENST00000461394 ADGRF5Q8IZF2 1346 aa9.33□□□□□ -0.92
MSH2-204ENST00000461394 CFAP70Q5T0N1 1121 aa9.33□□□□□ -0.92
MSH2-204ENST00000461394 NUTM2DQ5VT03 806 aaPredicted RBP9.33□□□□□ -0.92
MSH2-204ENST00000461394 SLC52A1Q9NWF4 448 aa9.33□□□□□ -0.92
MSH2-204ENST00000461394 ERVK-7P63135 1459 aa9.33□□□□□ -0.92
MSH2-204ENST00000461394 VGFO15240 615 aaPredicted RBP9.31□□□□□ -0.92
MSH2-204ENST00000461394 IDI1Q13907 227 aa9.31□□□□□ -0.92
MSH2-204ENST00000461394 FBXO31Q5XUX0 539 aaPredicted RBP9.31□□□□□ -0.92
MSH2-204ENST00000461394 KDM5AP29375 1690 aaKnown RBP9.31□□□□□ -0.92
MSH2-204ENST00000461394 TMEM131LA2VDJ0 1609 aa9.31□□□□□ -0.92
MSH2-204ENST00000461394 NEXMIFQ5QGS0 1516 aa9.31□□□□□ -0.92
MSH2-204ENST00000461394 SETBP1Q9Y6X0 1596 aa9.3□□□□□ -0.92
MSH2-204ENST00000461394 DISP3Q9P2K9 1392 aa9.3□□□□□ -0.92
MSH2-204ENST00000461394 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
MSH2-204ENST00000461394 QRICH2Q9H0J4 1663 aa9.29□□□□□ -0.92
MSH2-204ENST00000461394 NRXN1Q9ULB1 1477 aa9.29□□□□□ -0.92
MSH2-204ENST00000461394 PRKRIP1Q9H875 184 aaPredicted RBP9.29□□□□□ -0.92
MSH2-204ENST00000461394 FER1L4A9Z1Z3 1794 aa9.29□□□□□ -0.92
MSH2-204ENST00000461394 SPATA31D1Q6ZQQ2 1576 aa9.29□□□□□ -0.92
MSH2-204ENST00000461394 VASPP50552 380 aaPredicted RBP9.28□□□□□ -0.92
MSH2-204ENST00000461394 MRS2Q9HD23 443 aa9.28□□□□□ -0.92
MSH2-204ENST00000461394 PIK3C2GO75747 1445 aa9.28□□□□□ -0.92
MSH2-204ENST00000461394 TESK2Q96S53 571 aa9.27□□□□□ -0.93
MSH2-204ENST00000461394 TRAK1Q9UPV9 953 aa9.27□□□□□ -0.93
MSH2-204ENST00000461394 MYO3AQ8NEV4 1616 aa9.27□□□□□ -0.93
MSH2-204ENST00000461394 ZMYM3Q14202 1370 aa9.26□□□□□ -0.93
MSH2-204ENST00000461394 SPDYE4A6NLX3 237 aa9.26□□□□□ -0.93
MSH2-204ENST00000461394 TMEM132EQ6IEE7 984 aa9.26□□□□□ -0.93
MSH2-204ENST00000461394 C14orf93Q9H972 538 aaKnown RBP9.26□□□□□ -0.93
MSH2-204ENST00000461394 CENPJQ9HC77 1338 aaPredicted RBP9.26□□□□□ -0.93
MSH2-204ENST00000461394 KTN1Q86UP2 1357 aaKnown RBP9.25□□□□□ -0.93
MSH2-204ENST00000461394 TNRQ92752 1358 aa9.25□□□□□ -0.93
MSH2-204ENST00000461394 ARHGEF28Q8N1W1 1705 aaKnown RBP9.25□□□□□ -0.93
MSH2-204ENST00000461394 FAM9BQ8IZU0 186 aa9.25□□□□□ -0.93
MSH2-204ENST00000461394 RIMS2Q9UQ26 1411 aa9.24□□□□□ -0.93
MSH2-204ENST00000461394 PANK3Q9H999 370 aa9.24□□□□□ -0.93
MSH2-204ENST00000461394 STK26Q9P289 416 aa9.24□□□□□ -0.93
MSH2-204ENST00000461394 GTF3C3Q9Y5Q9 886 aa9.24□□□□□ -0.93
MSH2-204ENST00000461394 C3P01024 1663 aa9.23□□□□□ -0.93
MSH2-204ENST00000461394 MYOM1P52179 1685 aa9.23□□□□□ -0.93
MSH2-204ENST00000461394 HNRNPUQ00839 825 aaKnown RBP eCLIP9.23□□□□□ -0.93
MSH2-204ENST00000461394 RALBP1Q15311 655 aa9.23□□□□□ -0.93
MSH2-204ENST00000461394 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
MSH2-204ENST00000461394 ADGRB1O14514 1584 aa9.23□□□□□ -0.93
MSH2-204ENST00000461394 ZFYVE9O95405 1425 aa9.22□□□□□ -0.93
MSH2-204ENST00000461394 A2ML1A8K2U0 1454 aa9.22□□□□□ -0.93
MSH2-204ENST00000461394 HDGFP51858 240 aaKnown RBP9.22□□□□□ -0.93
MSH2-204ENST00000461394 CC2D1BQ5T0F9 858 aaKnown RBP9.22□□□□□ -0.93
MSH2-204ENST00000461394 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.22□□□□□ -0.93
MSH2-204ENST00000461394 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
MSH2-204ENST00000461394 DNAJC5Q9H3Z4 198 aa9.22□□□□□ -0.93
MSH2-204ENST00000461394 KNSTRNQ9Y448 316 aa9.22□□□□□ -0.93
MSH2-204ENST00000461394 UBR1Q8IWV7 1749 aa9.22□□□□□ -0.93
MSH2-204ENST00000461394 ALKQ9UM73 1620 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms