RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 NPC1L1Q9UHC9 1359 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 PLCH2O75038 1416 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 PIK3C2GO75747 1445 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 ASXL1Q8IXJ9 1541 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 NEURL4Q96JN8 1562 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 TET3O43151 1660 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 PER1O15534 1290 aaPredicted RBP4.34□□□□□ -1.71
HMGN1P18-201ENST00000457642 PAK3O75914 559 aaPredicted RBP4.34□□□□□ -1.71
HMGN1P18-201ENST00000457642 GOLGA2Q08379 1002 aa4.34□□□□□ -1.71
HMGN1P18-201ENST00000457642 NBPF1Q3BBV0 1214 aa4.34□□□□□ -1.71
HMGN1P18-201ENST00000457642 TESK2Q96S53 571 aa4.34□□□□□ -1.71
HMGN1P18-201ENST00000457642 CRBNQ96SW2 442 aa4.34□□□□□ -1.71
HMGN1P18-201ENST00000457642 SPAG9O60271 1321 aaKnown RBP4.34□□□□□ -1.71
HMGN1P18-201ENST00000457642 UHRF1BP1LA0JNW5 1464 aa4.34□□□□□ -1.71
HMGN1P18-201ENST00000457642 PLA2R1Q13018 1463 aa4.34□□□□□ -1.71
HMGN1P18-201ENST00000457642 ZCCHC11Q5TAX3 1644 aaKnown RBP4.34□□□□□ -1.71
HMGN1P18-201ENST00000457642 MYOM2P54296 1465 aa4.33□□□□□ -1.72
HMGN1P18-201ENST00000457642 WDR7Q9Y4E6 1490 aa4.33□□□□□ -1.72
HMGN1P18-201ENST00000457642 NEFMP07197 916 aa4.33□□□□□ -1.72
HMGN1P18-201ENST00000457642 CANXP27824 592 aaKnown RBP4.33□□□□□ -1.72
HMGN1P18-201ENST00000457642 PPP2R1AP30153 589 aa4.33□□□□□ -1.72
HMGN1P18-201ENST00000457642 DEPDC5O75140 1603 aa4.32□□□□□ -1.72
HMGN1P18-201ENST00000457642 ZFYVE16Q7Z3T8 1539 aa4.32□□□□□ -1.72
HMGN1P18-201ENST00000457642 PTPRTO14522 1441 aa4.32□□□□□ -1.72
HMGN1P18-201ENST00000457642 SENP3-EIF4A1A0A087X0R7 540 aa4.32□□□□□ -1.72
HMGN1P18-201ENST00000457642 E9PSI1 815 aa4.32□□□□□ -1.72
HMGN1P18-201ENST00000457642 AAMPQ13685 434 aa4.32□□□□□ -1.72
HMGN1P18-201ENST00000457642 FAM161AQ3B820 660 aa4.32□□□□□ -1.72
HMGN1P18-201ENST00000457642 CDCA7LQ96GN5 454 aa4.32□□□□□ -1.72
HMGN1P18-201ENST00000457642 KIF1BO60333 1816 aa4.32□□□□□ -1.72
HMGN1P18-201ENST00000457642 CLTCL1P53675 1640 aa4.32□□□□□ -1.72
HMGN1P18-201ENST00000457642 ATP7AQ04656 1500 aa4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 NKTRP30414 1462 aaKnown RBP4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 CGNL1Q0VF96 1302 aa4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 MAPK8IP3Q9UPT6 1336 aa4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 PLIN1O60240 522 aa4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 BECN1Q14457 450 aa4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 CFAP53Q96M91 514 aa4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 UPF2Q9HAU5 1272 aaKnown RBP4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 ADAMTS8Q9UP79 889 aa4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 LAS1LQ9Y4W2 734 aaKnown RBP4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 MAP3K4Q9Y6R4 1608 aa4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 INO80Q9ULG1 1556 aaPredicted RBP4.31□□□□□ -1.72
HMGN1P18-201ENST00000457642 TRAPPC8Q9Y2L5 1435 aa4.3□□□□□ -1.72
HMGN1P18-201ENST00000457642 KDM2BQ8NHM5 1336 aa4.3□□□□□ -1.72
HMGN1P18-201ENST00000457642 CENPJQ9HC77 1338 aaPredicted RBP4.3□□□□□ -1.72
HMGN1P18-201ENST00000457642 MYOM1P52179 1685 aa4.3□□□□□ -1.72
HMGN1P18-201ENST00000457642 SLFN5Q08AF3 891 aa4.3□□□□□ -1.72
HMGN1P18-201ENST00000457642 AMER1Q5JTC6 1135 aaPredicted RBP4.3□□□□□ -1.72
HMGN1P18-201ENST00000457642 DUSP27Q5VZP5 1158 aa4.3□□□□□ -1.72
HMGN1P18-201ENST00000457642 VWDEQ8N2E2 1590 aa4.3□□□□□ -1.72
HMGN1P18-201ENST00000457642 CFAP74Q9C0B2 1584 aa4.3□□□□□ -1.72
HMGN1P18-201ENST00000457642 POLR3AO14802 1390 aaPredicted RBP4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 PLEKHH1Q9ULM0 1364 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 SBNO2Q9Y2G9 1366 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 ABCA9Q8IUA7 1624 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 ABCA6Q8N139 1617 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 MYO3AQ8NEV4 1616 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 ZNF521Q96K83 1311 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 SETBP1Q9Y6X0 1596 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 PDE3AQ14432 1141 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 PMFBP1Q8TBY8 1022 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 EFCAB6Q5THR3 1501 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 FANCAO15360 1455 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 ADGRL1O94910 1474 aa4.29□□□□□ -1.72
HMGN1P18-201ENST00000457642 NSD2O96028 1365 aa4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 ZMYM3Q14202 1370 aa4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 VIRMAQ69YN4 1812 aaKnown RBP4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 LMTK2Q8IWU2 1503 aa4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 APAF1O14727 1248 aa4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 KIF3BO15066 747 aa4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 RGS3P49796 1198 aa4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 MORC1Q86VD1 984 aa4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 IFT172Q9UG01 1749 aa4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 ERVK-7P63135 1459 aa4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 USP32Q8NFA0 1604 aa4.28□□□□□ -1.72
HMGN1P18-201ENST00000457642 ERCC6L2Q5T890 1561 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 RPGRIP1LQ68CZ1 1315 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 ZNF518AQ6AHZ1 1483 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 NRXN1Q9ULB1 1477 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 GSE1Q14687 1217 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 NCBP3Q53F19 620 aaKnown RBP4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 C20orf194Q5TEA3 1177 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 CCDC146Q8IYE0 955 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 TRMT2AQ8IZ69 625 aaKnown RBP4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 CLUAP1Q96AJ1 413 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 RUNDC1Q96C34 613 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 RWDD1Q9H446 243 aaPredicted RBP4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 MYH16Q9H6N6 1097 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 NSD3Q9BZ95 1437 aa4.27□□□□□ -1.73
HMGN1P18-201ENST00000457642 ADGRB3O60242 1522 aa4.26□□□□□ -1.73
HMGN1P18-201ENST00000457642 ZC3H13Q5T200 1668 aaKnown RBP4.26□□□□□ -1.73
HMGN1P18-201ENST00000457642 QRICH2Q9H0J4 1663 aa4.26□□□□□ -1.73
HMGN1P18-201ENST00000457642 CT47B1P0C2W7 299 aaPredicted RBP4.26□□□□□ -1.73
HMGN1P18-201ENST00000457642 CHGAP10645 457 aaKnown RBP4.26□□□□□ -1.73
HMGN1P18-201ENST00000457642 NFKBIBQ15653 356 aa4.26□□□□□ -1.73
HMGN1P18-201ENST00000457642 C8orf34Q49A92 452 aa4.26□□□□□ -1.73
HMGN1P18-201ENST00000457642 WDR63Q8IWG1 891 aa4.26□□□□□ -1.73
HMGN1P18-201ENST00000457642 AFAP1Q8N556 730 aa4.26□□□□□ -1.73
HMGN1P18-201ENST00000457642 PUS7Q96PZ0 661 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms