RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 PTPRTO14522 1441 aa14.96□□□□□ -0.01
RFX3-210ENST00000457373 ACIN1Q9UKV3 1341 aaKnown RBP14.95□□□□□ -0.02
RFX3-210ENST00000457373 ADGRB3O60242 1522 aa14.94□□□□□ -0.02
RFX3-210ENST00000457373 TXNDC2Q86VQ3 553 aa14.94□□□□□ -0.02
RFX3-210ENST00000457373 KDM5AP29375 1690 aaKnown RBP14.93□□□□□ -0.02
RFX3-210ENST00000457373 EID1Q9Y6B2 187 aa14.93□□□□□ -0.02
RFX3-210ENST00000457373 NEURL4Q96JN8 1562 aa14.93□□□□□ -0.02
RFX3-210ENST00000457373 TMEM131LA2VDJ0 1609 aa14.92□□□□□ -0.02
RFX3-210ENST00000457373 LTKP29376 864 aa14.92□□□□□ -0.02
RFX3-210ENST00000457373 TMEM2Q9UHN6 1383 aa14.92□□□□□ -0.02
RFX3-210ENST00000457373 SLIT1O75093 1534 aa14.92□□□□□ -0.02
RFX3-210ENST00000457373 NPHP4O75161 1426 aaPredicted RBP14.92□□□□□ -0.02
RFX3-210ENST00000457373 ARHGAP23Q9P227 1491 aa14.91□□□□□ -0.02
RFX3-210ENST00000457373 CLTCL1P53675 1640 aa14.91□□□□□ -0.02
RFX3-210ENST00000457373 HRCP23327 699 aa14.9□□□□□ -0.02
RFX3-210ENST00000457373 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
RFX3-210ENST00000457373 TRPM2O94759 1503 aa14.9□□□□□ -0.02
RFX3-210ENST00000457373 KIF1BO60333 1816 aa14.89□□□□□ -0.03
RFX3-210ENST00000457373 SCAF11Q99590 1463 aaKnown RBP14.89□□□□□ -0.03
RFX3-210ENST00000457373 ZNF326Q5BKZ1 582 aaKnown RBP14.89□□□□□ -0.03
RFX3-210ENST00000457373 NUTM2DQ5VT03 806 aaPredicted RBP14.89□□□□□ -0.03
RFX3-210ENST00000457373 IQGAP1P46940 1657 aa14.88□□□□□ -0.03
RFX3-210ENST00000457373 HDGFP51858 240 aaKnown RBP14.88□□□□□ -0.03
RFX3-210ENST00000457373 BCANQ96GW7 911 aa14.88□□□□□ -0.03
RFX3-210ENST00000457373 MED14O60244 1454 aa14.88□□□□□ -0.03
RFX3-210ENST00000457373 RIMS2Q9UQ26 1411 aa14.87□□□□□ -0.03
RFX3-210ENST00000457373 PPP1R15AO75807 674 aaPredicted RBP14.87□□□□□ -0.03
RFX3-210ENST00000457373 ZNF335Q9H4Z2 1342 aaPredicted RBP14.87□□□□□ -0.03
RFX3-210ENST00000457373 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.85□□□□□ -0.03
RFX3-210ENST00000457373 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.03
RFX3-210ENST00000457373 ZFYVE9O95405 1425 aa14.83□□□□□ -0.03
RFX3-210ENST00000457373 CERKQ8TCT0 537 aa14.83□□□□□ -0.04
RFX3-210ENST00000457373 SLC26A8Q96RN1 970 aa14.82□□□□□ -0.04
RFX3-210ENST00000457373 LTBP4Q8N2S1 1624 aa14.81□□□□□ -0.04
RFX3-210ENST00000457373 RGL3Q3MIN7 710 aa14.8□□□□□ -0.04
RFX3-210ENST00000457373 PLEKHG1Q9ULL1 1385 aa14.8□□□□□ -0.04
RFX3-210ENST00000457373 NEXMIFQ5QGS0 1516 aa14.77□□□□□ -0.04
RFX3-210ENST00000457373 ANKRD30BQ9BXX2 1392 aa14.77□□□□□ -0.04
RFX3-210ENST00000457373 STRCP1A6NGW2 1772 aa14.77□□□□□ -0.05
RFX3-210ENST00000457373 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
RFX3-210ENST00000457373 PPLO60437 1756 aa14.75□□□□□ -0.05
RFX3-210ENST00000457373 RPGRIP1LQ68CZ1 1315 aa14.75□□□□□ -0.05
RFX3-210ENST00000457373 VGFO15240 615 aaPredicted RBP14.74□□□□□ -0.05
RFX3-210ENST00000457373 TBX22Q9Y458 520 aa14.74□□□□□ -0.05
RFX3-210ENST00000457373 SPATA31E1Q6ZUB1 1445 aa14.74□□□□□ -0.05
RFX3-210ENST00000457373 CPS1P31327 1500 aa14.73□□□□□ -0.05
RFX3-210ENST00000457373 KCNA6P17658 529 aa14.73□□□□□ -0.05
RFX3-210ENST00000457373 ADAMTS13Q76LX8 1427 aa14.73□□□□□ -0.05
RFX3-210ENST00000457373 PCGF6Q9BYE7 350 aa14.72□□□□□ -0.05
RFX3-210ENST00000457373 CHD2O14647 1828 aaKnown RBP14.71□□□□□ -0.05
RFX3-210ENST00000457373 NRXN3Q9Y4C0 1643 aa14.71□□□□□ -0.05
RFX3-210ENST00000457373 FBXO41Q8TF61 875 aa14.71□□□□□ -0.05
RFX3-210ENST00000457373 IFT172Q9UG01 1749 aa14.7□□□□□ -0.06
RFX3-210ENST00000457373 ILDR1Q86SU0 546 aaPredicted RBP14.7□□□□□ -0.06
RFX3-210ENST00000457373 ADGRF5Q8IZF2 1346 aa14.69□□□□□ -0.06
RFX3-210ENST00000457373 DIP2AQ14689 1571 aa14.69□□□□□ -0.06
RFX3-210ENST00000457373 SETBP1Q9Y6X0 1596 aa14.69□□□□□ -0.06
RFX3-210ENST00000457373 PROSER2Q86WR7 435 aaPredicted RBP14.69□□□□□ -0.06
RFX3-210ENST00000457373 LRRC7Q96NW7 1537 aa14.69□□□□□ -0.06
RFX3-210ENST00000457373 IQSEC2Q5JU85 1478 aa14.69□□□□□ -0.06
RFX3-210ENST00000457373 RBM33Q96EV2 1170 aaKnown RBP14.68□□□□□ -0.06
RFX3-210ENST00000457373 DHX57Q6P158 1386 aaKnown RBP14.68□□□□□ -0.06
RFX3-210ENST00000457373 AMOTL2Q9Y2J4 779 aa14.67□□□□□ -0.06
RFX3-210ENST00000457373 KDM2AQ9Y2K7 1162 aa14.67□□□□□ -0.06
RFX3-210ENST00000457373 NWD1Q149M9 1564 aa14.66□□□□□ -0.06
RFX3-210ENST00000457373 METP08581 1390 aa14.66□□□□□ -0.06
RFX3-210ENST00000457373 PIK3R4Q99570 1358 aa14.66□□□□□ -0.06
RFX3-210ENST00000457373 UBAP1LF5GYI3 381 aa14.66□□□□□ -0.06
RFX3-210ENST00000457373 DCAF11Q8TEB1 546 aa14.66□□□□□ -0.06
RFX3-210ENST00000457373 SIN3AQ96ST3 1273 aa14.66□□□□□ -0.06
RFX3-210ENST00000457373 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
RFX3-210ENST00000457373 ALKQ9UM73 1620 aa14.66□□□□□ -0.06
RFX3-210ENST00000457373 PTPRUQ92729 1446 aa14.66□□□□□ -0.06
RFX3-210ENST00000457373 TMEM94Q12767 1356 aa14.64□□□□□ -0.07
RFX3-210ENST00000457373 NEUROD1Q13562 356 aa14.64□□□□□ -0.07
RFX3-210ENST00000457373 SETD1AO15047 1707 aaKnown RBP14.63□□□□□ -0.07
RFX3-210ENST00000457373 NKTRP30414 1462 aaKnown RBP14.63□□□□□ -0.07
RFX3-210ENST00000457373 TOM1O60784 492 aa14.62□□□□□ -0.07
RFX3-210ENST00000457373 C14orf37Q86TY3 774 aa14.61□□□□□ -0.07
RFX3-210ENST00000457373 MYOM2P54296 1465 aa14.61□□□□□ -0.07
RFX3-210ENST00000457373 PIK3C2GO75747 1445 aa14.6□□□□□ -0.07
RFX3-210ENST00000457373 PIP4K2BP78356 416 aa14.6□□□□□ -0.07
RFX3-210ENST00000457373 CFAP70Q5T0N1 1121 aa14.6□□□□□ -0.07
RFX3-210ENST00000457373 TMEM132EQ6IEE7 984 aa14.6□□□□□ -0.07
RFX3-210ENST00000457373 XRN1Q8IZH2 1706 aaKnown RBP14.6□□□□□ -0.07
RFX3-210ENST00000457373 C14orf93Q9H972 538 aaKnown RBP14.59□□□□□ -0.07
RFX3-210ENST00000457373 STK26Q9P289 416 aa14.59□□□□□ -0.07
RFX3-210ENST00000457373 NRXN1Q9ULB1 1477 aa14.57□□□□□ -0.08
RFX3-210ENST00000457373 STAC3Q96MF2 364 aa14.57□□□□□ -0.08
RFX3-210ENST00000457373 MSH6P52701 1360 aa14.57□□□□□ -0.08
RFX3-210ENST00000457373 LAMC1P11047 1609 aa14.55□□□□□ -0.08
RFX3-210ENST00000457373 L3MBTL2Q969R5 705 aa14.55□□□□□ -0.08
RFX3-210ENST00000457373 NCOA3Q9Y6Q9 1424 aa14.55□□□□□ -0.08
RFX3-210ENST00000457373 ASXL1Q8IXJ9 1541 aa14.55□□□□□ -0.08
RFX3-210ENST00000457373 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
RFX3-210ENST00000457373 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
RFX3-210ENST00000457373 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.53□□□□□ -0.08
RFX3-210ENST00000457373 LRPPRCP42704 1394 aaKnown RBP14.53□□□□□ -0.08
RFX3-210ENST00000457373 ROBO2Q9HCK4 1378 aa14.53□□□□□ -0.08
RFX3-210ENST00000457373 C19orf44Q9H6X5 657 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms