RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 FRMPD1Q5SYB0 1578 aa10.61□□□□□ -0.71
TRIM4-204ENST00000447480 ABCC5O15440 1437 aa10.61□□□□□ -0.71
TRIM4-204ENST00000447480 TRAPPC8Q9Y2L5 1435 aa10.61□□□□□ -0.71
TRIM4-204ENST00000447480 PKD2Q13563 968 aa10.61□□□□□ -0.71
TRIM4-204ENST00000447480 FAM135AQ9P2D6 1515 aa10.61□□□□□ -0.71
TRIM4-204ENST00000447480 KIDINS220Q9ULH0 1771 aa10.61□□□□□ -0.71
TRIM4-204ENST00000447480 ERBINQ96RT1 1412 aa10.6□□□□□ -0.71
TRIM4-204ENST00000447480 ARHGEF12Q9NZN5 1544 aa10.6□□□□□ -0.71
TRIM4-204ENST00000447480 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
TRIM4-204ENST00000447480 RAPGEF3O95398 923 aa10.6□□□□□ -0.71
TRIM4-204ENST00000447480 ATN1P54259 1190 aaPredicted RBP10.6□□□□□ -0.71
TRIM4-204ENST00000447480 AFAP1Q8N556 730 aa10.6□□□□□ -0.71
TRIM4-204ENST00000447480 ZNF644Q9H582 1327 aaPredicted RBP10.59□□□□□ -0.71
TRIM4-204ENST00000447480 TMEM106CQ9BVX2 250 aa10.59□□□□□ -0.71
TRIM4-204ENST00000447480 BCL11AQ9H165 835 aa10.59□□□□□ -0.71
TRIM4-204ENST00000447480 GCC2Q8IWJ2 1684 aa10.59□□□□□ -0.71
TRIM4-204ENST00000447480 FANCIQ9NVI1 1328 aa10.58□□□□□ -0.71
TRIM4-204ENST00000447480 AGLP35573 1532 aa10.58□□□□□ -0.72
TRIM4-204ENST00000447480 BCORL1Q5H9F3 1711 aa10.58□□□□□ -0.72
TRIM4-204ENST00000447480 A2MP01023 1474 aa10.58□□□□□ -0.72
TRIM4-204ENST00000447480 NCOA1Q15788 1441 aa10.58□□□□□ -0.72
TRIM4-204ENST00000447480 DIP2CQ9Y2E4 1556 aa10.57□□□□□ -0.72
TRIM4-204ENST00000447480 DHX29Q7Z478 1369 aaKnown RBP10.57□□□□□ -0.72
TRIM4-204ENST00000447480 KIF15Q9NS87 1388 aa10.57□□□□□ -0.72
TRIM4-204ENST00000447480 ECM2O94769 699 aaPredicted RBP10.57□□□□□ -0.72
TRIM4-204ENST00000447480 ESF1Q9H501 851 aaKnown RBP10.57□□□□□ -0.72
TRIM4-204ENST00000447480 KANK1Q14678 1352 aa10.56□□□□□ -0.72
TRIM4-204ENST00000447480 ABCA6Q8N139 1617 aa10.56□□□□□ -0.72
TRIM4-204ENST00000447480 RNF25Q96BH1 459 aaPredicted RBP10.56□□□□□ -0.72
TRIM4-204ENST00000447480 HFM1A2PYH4 1435 aa10.56□□□□□ -0.72
TRIM4-204ENST00000447480 COL17A1Q9UMD9 1497 aaPredicted RBP10.55□□□□□ -0.72
TRIM4-204ENST00000447480 ITGAEP38570 1179 aa10.55□□□□□ -0.72
TRIM4-204ENST00000447480 ZC3H13Q5T200 1668 aaKnown RBP10.54□□□□□ -0.72
TRIM4-204ENST00000447480 ANKRD50Q9ULJ7 1429 aa10.54□□□□□ -0.72
TRIM4-204ENST00000447480 ARID4BQ4LE39 1312 aaPredicted RBP10.54□□□□□ -0.72
TRIM4-204ENST00000447480 CNTLNQ9NXG0 1405 aa10.53□□□□□ -0.72
TRIM4-204ENST00000447480 PSEN1P49768 467 aa10.53□□□□□ -0.72
TRIM4-204ENST00000447480 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
TRIM4-204ENST00000447480 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
TRIM4-204ENST00000447480 RNF17Q9BXT8 1623 aaKnown RBP10.52□□□□□ -0.73
TRIM4-204ENST00000447480 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
TRIM4-204ENST00000447480 CHIC2Q9UKJ5 165 aa10.52□□□□□ -0.73
TRIM4-204ENST00000447480 RBM19Q9Y4C8 960 aaKnown RBP10.52□□□□□ -0.73
TRIM4-204ENST00000447480 SETD5Q9C0A6 1442 aa10.51□□□□□ -0.73
TRIM4-204ENST00000447480 RRP7BPQ9NSQ0 103 aa10.51□□□□□ -0.73
TRIM4-204ENST00000447480 YEATS2Q9ULM3 1422 aa10.5□□□□□ -0.73
TRIM4-204ENST00000447480 PPP1R15AO75807 674 aaPredicted RBP10.5□□□□□ -0.73
TRIM4-204ENST00000447480 METRNQ9UJH8 293 aa10.5□□□□□ -0.73
TRIM4-204ENST00000447480 DEPDC5O75140 1603 aa10.5□□□□□ -0.73
TRIM4-204ENST00000447480 RGL2O15211 777 aa10.49□□□□□ -0.73
TRIM4-204ENST00000447480 ANP32CO43423 234 aa10.49□□□□□ -0.73
TRIM4-204ENST00000447480 SLC39A7Q92504 469 aa10.49□□□□□ -0.73
TRIM4-204ENST00000447480 NAIPQ13075 1403 aa10.49□□□□□ -0.73
TRIM4-204ENST00000447480 PRDM15P57071 1507 aaPredicted RBP10.48□□□□□ -0.73
TRIM4-204ENST00000447480 KDM5DQ9BY66 1539 aa10.48□□□□□ -0.73
TRIM4-204ENST00000447480 UNC13BO14795 1591 aa10.48□□□□□ -0.73
TRIM4-204ENST00000447480 MROH2AA6NES4 1674 aa10.48□□□□□ -0.73
TRIM4-204ENST00000447480 KIF3BO15066 747 aa10.48□□□□□ -0.73
TRIM4-204ENST00000447480 C7P10643 843 aa10.48□□□□□ -0.73
TRIM4-204ENST00000447480 FER1L4A9Z1Z3 1794 aa10.47□□□□□ -0.73
TRIM4-204ENST00000447480 PTPRKQ15262 1439 aa10.47□□□□□ -0.73
TRIM4-204ENST00000447480 IQGAP3Q86VI3 1631 aa10.45□□□□□ -0.74
TRIM4-204ENST00000447480 RPRD2Q5VT52 1461 aaKnown RBP10.45□□□□□ -0.74
TRIM4-204ENST00000447480 WASHC2CQ9Y4E1 1318 aa10.45□□□□□ -0.74
TRIM4-204ENST00000447480 VGFO15240 615 aaPredicted RBP10.45□□□□□ -0.74
TRIM4-204ENST00000447480 TET3O43151 1660 aa10.44□□□□□ -0.74
TRIM4-204ENST00000447480 LMTK2Q8IWU2 1503 aa10.44□□□□□ -0.74
TRIM4-204ENST00000447480 RAB3GAP2Q9H2M9 1393 aa10.44□□□□□ -0.74
TRIM4-204ENST00000447480 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.44□□□□□ -0.74
TRIM4-204ENST00000447480 GGT6Q6P531 493 aa10.44□□□□□ -0.74
TRIM4-204ENST00000447480 ZFP91Q96JP5 570 aaPredicted RBP10.44□□□□□ -0.74
TRIM4-204ENST00000447480 SETD1BQ9UPS6 1966 aaKnown RBP10.43□□□□□ -0.74
TRIM4-204ENST00000447480 NUP155O75694 1391 aa10.42□□□□□ -0.74
TRIM4-204ENST00000447480 ADAMTSL3P82987 1691 aa10.42□□□□□ -0.74
TRIM4-204ENST00000447480 IER5LQ5T953 404 aa10.42□□□□□ -0.74
TRIM4-204ENST00000447480 LHX8Q68G74 356 aa10.42□□□□□ -0.74
TRIM4-204ENST00000447480 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
TRIM4-204ENST00000447480 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
TRIM4-204ENST00000447480 ARHGAP31Q2M1Z3 1444 aa10.41□□□□□ -0.74
TRIM4-204ENST00000447480 VWDEQ8N2E2 1590 aa10.41□□□□□ -0.74
TRIM4-204ENST00000447480 POTEFA5A3E0 1075 aa10.41□□□□□ -0.74
TRIM4-204ENST00000447480 GOLGA2Q08379 1002 aa10.41□□□□□ -0.74
TRIM4-204ENST00000447480 COLQQ9Y215 455 aaPredicted RBP10.41□□□□□ -0.74
TRIM4-204ENST00000447480 CLTCQ00610 1675 aaKnown RBP10.41□□□□□ -0.74
TRIM4-204ENST00000447480 CAMSAP1Q5T5Y3 1602 aa10.4□□□□□ -0.74
TRIM4-204ENST00000447480 ABCC3O15438 1527 aa10.4□□□□□ -0.74
TRIM4-204ENST00000447480 SEC24BO95487 1268 aa10.4□□□□□ -0.74
TRIM4-204ENST00000447480 EFCAB6Q5THR3 1501 aa10.39□□□□□ -0.75
TRIM4-204ENST00000447480 CEP152O94986 1710 aa10.39□□□□□ -0.75
TRIM4-204ENST00000447480 POTEB2H3BUK9 544 aa10.39□□□□□ -0.75
TRIM4-204ENST00000447480 NPATQ14207 1427 aa10.39□□□□□ -0.75
TRIM4-204ENST00000447480 RIMS1Q86UR5 1692 aaKnown RBP10.38□□□□□ -0.75
TRIM4-204ENST00000447480 PZPP20742 1482 aa10.38□□□□□ -0.75
TRIM4-204ENST00000447480 MROH1Q8NDA8 1641 aa10.38□□□□□ -0.75
TRIM4-204ENST00000447480 MADDQ8WXG6 1647 aa10.38□□□□□ -0.75
TRIM4-204ENST00000447480 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
TRIM4-204ENST00000447480 MLECQ14165 292 aa10.38□□□□□ -0.75
TRIM4-204ENST00000447480 ERICH6Q7L0X2 663 aa10.38□□□□□ -0.75
TRIM4-204ENST00000447480 PPP4R2Q9NY27 417 aa10.38□□□□□ -0.75
TRIM4-204ENST00000447480 TAOK2Q9UL54 1235 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms