RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
FN1-212ENST00000446046 SF3A1Q15459 793 aaKnown RBP14.44□□□□□ -0.1
FN1-212ENST00000446046 RBM33Q96EV2 1170 aaKnown RBP14.44□□□□□ -0.1
FN1-212ENST00000446046 MYBBP1AQ9BQG0 1328 aaKnown RBP14.44□□□□□ -0.1
FN1-212ENST00000446046 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
FN1-212ENST00000446046 KANK4Q5T7N3 995 aaPredicted RBP14.43□□□□□ -0.1
FN1-212ENST00000446046 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
FN1-212ENST00000446046 H3BQV1 296 aa14.42□□□□□ -0.1
FN1-212ENST00000446046 IFFO2Q5TF58 517 aa14.42□□□□□ -0.1
FN1-212ENST00000446046 HOOK1Q9UJC3 728 aaKnown RBP14.42□□□□□ -0.1
FN1-212ENST00000446046 TPD52L1Q16890 204 aaPredicted RBP14.41□□□□□ -0.1
FN1-212ENST00000446046 TRDNQ13061 729 aa14.41□□□□□ -0.1
FN1-212ENST00000446046 FAM184AQ8NB25 1140 aa14.41□□□□□ -0.1
FN1-212ENST00000446046 L3MBTL2Q969R5 705 aa14.4□□□□□ -0.1
FN1-212ENST00000446046 TRIM29Q14134 588 aa14.4□□□□□ -0.1
FN1-212ENST00000446046 CCDC47Q96A33 483 aaKnown RBP14.4□□□□□ -0.1
FN1-212ENST00000446046 E9PSI1 815 aa14.4□□□□□ -0.1
FN1-212ENST00000446046 TPM1P09493 284 aa14.4□□□□□ -0.1
FN1-212ENST00000446046 NAP1L5Q96NT1 182 aaPredicted RBP14.4□□□□□ -0.1
FN1-212ENST00000446046 NCAPD3P42695 1498 aa14.4□□□□□ -0.1
FN1-212ENST00000446046 TPM3P06753 285 aa14.4□□□□□ -0.1
FN1-212ENST00000446046 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
FN1-212ENST00000446046 ERICH2A1L162 156 aa14.39□□□□□ -0.11
FN1-212ENST00000446046 EHBP1L1Q8N3D4 1523 aa14.39□□□□□ -0.11
FN1-212ENST00000446046 GOLGA6L1Q8N7Z2 621 aa14.39□□□□□ -0.11
FN1-212ENST00000446046 A0A0U1RQG5 324 aaPredicted RBP14.39□□□□□ -0.11
FN1-212ENST00000446046 MINK1Q8N4C8 1332 aaPredicted RBP14.38□□□□□ -0.11
FN1-212ENST00000446046 USP47Q96K76 1375 aa14.38□□□□□ -0.11
FN1-212ENST00000446046 THEMISQ8N1K5 641 aaPredicted RBP14.38□□□□□ -0.11
FN1-212ENST00000446046 CCDC43Q96MW1 224 aaKnown RBP14.38□□□□□ -0.11
FN1-212ENST00000446046 RNF20Q5VTR2 975 aa14.38□□□□□ -0.11
FN1-212ENST00000446046 CNKSR2Q8WXI2 1034 aa14.37□□□□□ -0.11
FN1-212ENST00000446046 HSP90AB4PQ58FF6 505 aa14.37□□□□□ -0.11
FN1-212ENST00000446046 KIF14Q15058 1648 aa14.37□□□□□ -0.11
FN1-212ENST00000446046 DIAPH3Q9NSV4 1193 aa14.37□□□□□ -0.11
FN1-212ENST00000446046 DIAPH1O60610 1272 aaKnown RBP14.36□□□□□ -0.11
FN1-212ENST00000446046 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
FN1-212ENST00000446046 ZKSCAN1P17029 563 aaPredicted RBP14.35□□□□□ -0.11
FN1-212ENST00000446046 PANK3Q9H999 370 aa14.35□□□□□ -0.11
FN1-212ENST00000446046 REC8O95072 547 aa14.35□□□□□ -0.11
FN1-212ENST00000446046 KIF6Q6ZMV9 814 aa14.35□□□□□ -0.11
FN1-212ENST00000446046 ANKRD20A12PQ8NF67 263 aa14.35□□□□□ -0.11
FN1-212ENST00000446046 CCDC146Q8IYE0 955 aa14.34□□□□□ -0.11
FN1-212ENST00000446046 APPP05067 770 aa14.34□□□□□ -0.11
FN1-212ENST00000446046 G3BP1Q13283 466 aaKnown RBP eCLIP14.34□□□□□ -0.112e-53■□□□□ 8.6
FN1-212ENST00000446046 ZKSCAN2Q63HK3 967 aa14.34□□□□□ -0.11
FN1-212ENST00000446046 ITSN2Q9NZM3 1697 aa14.33□□□□□ -0.11
FN1-212ENST00000446046 IFIT2P09913 472 aaKnown RBP14.33□□□□□ -0.12
FN1-212ENST00000446046 ST20-MTHFSA0A0A6YYL1 179 aa14.33□□□□□ -0.12
FN1-212ENST00000446046 RILPL2Q969X0 211 aa14.33□□□□□ -0.12
FN1-212ENST00000446046 MFAP1P55081 439 aaKnown RBP14.33□□□□□ -0.12
FN1-212ENST00000446046 FBXW7Q969H0 707 aa14.33□□□□□ -0.12
FN1-212ENST00000446046 SETD1BQ9UPS6 1966 aaKnown RBP14.33□□□□□ -0.12
FN1-212ENST00000446046 EPRSP07814 1512 aaKnown RBP14.32□□□□□ -0.12
FN1-212ENST00000446046 CCDC70Q6NSX1 233 aa14.32□□□□□ -0.12
FN1-212ENST00000446046 RAD54L2Q9Y4B4 1467 aa14.32□□□□□ -0.12
FN1-212ENST00000446046 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
FN1-212ENST00000446046 API5Q9BZZ5 524 aaKnown RBP14.32□□□□□ -0.12
FN1-212ENST00000446046 DDX19BQ9UMR2 479 aa14.31□□□□□ -0.12
FN1-212ENST00000446046 ERC2O15083 957 aa14.31□□□□□ -0.12
FN1-212ENST00000446046 CREBRFQ8IUR6 639 aa14.31□□□□□ -0.12
FN1-212ENST00000446046 SPRYD3Q8NCJ5 442 aa14.31□□□□□ -0.12
FN1-212ENST00000446046 CASKIN1Q8WXD9 1431 aa14.31□□□□□ -0.12
FN1-212ENST00000446046 CTTNBP2Q8WZ74 1663 aa14.31□□□□□ -0.12
FN1-212ENST00000446046 GOLGA6L19H0YKK7 550 aa14.31□□□□□ -0.12
FN1-212ENST00000446046 PES1O00541 588 aaKnown RBP14.3□□□□□ -0.12
FN1-212ENST00000446046 AAMPQ13685 434 aa14.3□□□□□ -0.12
FN1-212ENST00000446046 CCAR1Q8IX12 1150 aaKnown RBP14.3□□□□□ -0.12
FN1-212ENST00000446046 IQGAP2Q13576 1575 aa14.3□□□□□ -0.12
FN1-212ENST00000446046 RAD21O60216 631 aa14.3□□□□□ -0.12
FN1-212ENST00000446046 EIF2S2P20042 333 aaKnown RBP14.3□□□□□ -0.12
FN1-212ENST00000446046 KLHL34Q8N239 644 aa14.3□□□□□ -0.12
FN1-212ENST00000446046 SLC3A2P08195 630 aaKnown RBP14.3□□□□□ -0.12
FN1-212ENST00000446046 WWC2Q6AWC2 1192 aa14.3□□□□□ -0.12
FN1-212ENST00000446046 CENPQQ7L2Z9 268 aaPredicted RBP14.3□□□□□ -0.12
FN1-212ENST00000446046 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
FN1-212ENST00000446046 PRG4Q92954 1404 aaPredicted RBP14.29□□□□□ -0.12
FN1-212ENST00000446046 FGD6Q6ZV73 1430 aa14.29□□□□□ -0.12
FN1-212ENST00000446046 XBP1P17861 261 aa14.29□□□□□ -0.12
FN1-212ENST00000446046 BRMS1Q9HCU9 246 aa14.29□□□□□ -0.12
FN1-212ENST00000446046 NINLQ9Y2I6 1382 aa14.29□□□□□ -0.12
FN1-212ENST00000446046 CPLX1O14810 134 aa14.29□□□□□ -0.12
FN1-212ENST00000446046 RIC3Q7Z5B4 369 aa14.29□□□□□ -0.12
FN1-212ENST00000446046 GNAI1P63096 354 aa14.28□□□□□ -0.12
FN1-212ENST00000446046 ABTB2Q8N961 1025 aa14.28□□□□□ -0.12
FN1-212ENST00000446046 ANKRD45Q5TZF3 282 aa14.28□□□□□ -0.12
FN1-212ENST00000446046 ANKRD50Q9ULJ7 1429 aa14.28□□□□□ -0.12
FN1-212ENST00000446046 DHX16O60231 1041 aaKnown RBP14.28□□□□□ -0.12
FN1-212ENST00000446046 SAFBQ15424 915 aaKnown RBP eCLIP14.28□□□□□ -0.12
FN1-212ENST00000446046 IPO7O95373 1038 aaKnown RBP14.28□□□□□ -0.12
FN1-212ENST00000446046 AQRO60306 1485 aaKnown RBP eCLIP14.28□□□□□ -0.129e-12■■■■■ 26.9
FN1-212ENST00000446046 LRRC9Q6ZRR7 1453 aa14.27□□□□□ -0.12
FN1-212ENST00000446046 DDX11L8A8MPP1 907 aa14.27□□□□□ -0.12
FN1-212ENST00000446046 GAS2L2Q8NHY3 880 aa14.27□□□□□ -0.12
FN1-212ENST00000446046 TSPYL4Q9UJ04 414 aa14.27□□□□□ -0.13
FN1-212ENST00000446046 RUNDC1Q96C34 613 aa14.27□□□□□ -0.13
FN1-212ENST00000446046 SLC52A1Q9NWF4 448 aa14.26□□□□□ -0.13
FN1-212ENST00000446046 TXNDC2Q86VQ3 553 aa14.26□□□□□ -0.13
FN1-212ENST00000446046 ANKLE2Q86XL3 938 aa14.26□□□□□ -0.13
FN1-212ENST00000446046 NLRP2Q9NX02 1062 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms