RNA–Protein interactions for RNA: ENST00000438535.1

PRKAR2A-205, Transcript of protein kinase cAMP-dependent type II regulatory subunit alpha, human

TSL 3

Gene PRKAR2A, Length 624 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR2A-205	ENST00000438535	NUP155	O75694	1391 aa		13.48	□□□□□ -0.25
PRKAR2A-205	ENST00000438535	SYNM	O15061	1565 aa		13.48	□□□□□ -0.25
PRKAR2A-205	ENST00000438535	PIK3C2B	O00750	1634 aa		13.47	□□□□□ -0.25
PRKAR2A-205	ENST00000438535		E9PCH4	1651 aa		13.47	□□□□□ -0.25
PRKAR2A-205	ENST00000438535	KDM5A	P29375	1690 aa	Known RBP	13.47	□□□□□ -0.25
PRKAR2A-205	ENST00000438535	ANKLE2	Q86XL3	938 aa		13.46	□□□□□ -0.25
PRKAR2A-205	ENST00000438535	NEURL4	Q96JN8	1562 aa		13.45	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	SLC52A1	Q9NWF4	448 aa		13.45	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	MED14	O60244	1454 aa		13.44	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	IDI1	Q13907	227 aa		13.44	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	SLIT1	O75093	1534 aa		13.44	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	ARHGAP23	Q9P227	1491 aa		13.43	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	CERK	Q8TCT0	537 aa		13.42	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	AKT1S1	Q96B36	256 aa		13.42	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	STAG3	Q9UJ98	1225 aa		13.42	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	ADGRB3	O60242	1522 aa		13.42	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	NPHP4	O75161	1426 aa	Predicted RBP	13.41	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	LTBP4	Q8N2S1	1624 aa		13.41	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	TMEM2	Q9UHN6	1383 aa		13.4	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	SCAF11	Q99590	1463 aa	Known RBP	13.4	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	IQGAP1	P46940	1657 aa		13.4	□□□□□ -0.26
PRKAR2A-205	ENST00000438535	EID1	Q9Y6B2	187 aa		13.39	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	LTK	P29376	864 aa		13.38	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	TXNDC2	Q86VQ3	553 aa		13.38	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	FBXO41	Q8TF61	875 aa		13.38	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	TRIM52	Q96A61	297 aa		13.38	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	SPHKAP	Q2M3C7	1700 aa		13.38	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	TMEM131L	A2VDJ0	1609 aa		13.38	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.38	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	ACIN1	Q9UKV3	1341 aa	Known RBP	13.37	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	IQSEC2	Q5JU85	1478 aa		13.36	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	MYO5B	Q9ULV0	1848 aa		13.34	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	TRPM2	O94759	1503 aa		13.34	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	SETD5	Q9C0A6	1442 aa		13.34	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	MKRN4P	Q13434	485 aa	Predicted RBP	13.34	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	CPS1	P31327	1500 aa		13.34	□□□□□ -0.27
PRKAR2A-205	ENST00000438535	ZFYVE9	O95405	1425 aa		13.33	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	CHGA	P10645	457 aa	Known RBP	13.33	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	HDGF	P51858	240 aa	Known RBP	13.33	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	RIMS2	Q9UQ26	1411 aa		13.32	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	CHRDL2	Q6WN34	429 aa		13.32	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	CLTCL1	P53675	1640 aa		13.31	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	MPHOSPH9	Q99550	1183 aa		13.29	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	RAB3GAP2	Q9H2M9	1393 aa		13.29	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	PLEKHG1	Q9ULL1	1385 aa		13.29	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	STRCP1	A6NGW2	1772 aa		13.28	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	PPP1R15A	O75807	674 aa	Predicted RBP	13.28	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	REM2	Q8IYK8	340 aa	Predicted RBP	13.28	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	KIF1B	O60333	1816 aa		13.27	□□□□□ -0.28
PRKAR2A-205	ENST00000438535	SPDYE2B	A6NHP3	402 aa		13.26	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	SPDYE6	P0CI01	402 aa		13.26	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	HRC	P23327	699 aa		13.26	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	SPDYE2	Q495Y8	402 aa		13.26	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	BCAN	Q96GW7	911 aa		13.26	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	SLC26A8	Q96RN1	970 aa		13.26	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	ZNF326	Q5BKZ1	582 aa	Known RBP	13.25	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	LRRC7	Q96NW7	1537 aa		13.24	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.24	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	DIP2A	Q14689	1571 aa		13.24	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	NEXMIF	Q5QGS0	1516 aa		13.23	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	KCNA6	P17658	529 aa		13.23	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	TBX22	Q9Y458	520 aa		13.23	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	NWD1	Q149M9	1564 aa		13.23	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	CCDC144A	A2RUR9	1427 aa		13.22	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	ADAMTS13	Q76LX8	1427 aa		13.22	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	SETBP1	Q9Y6X0	1596 aa		13.21	□□□□□ -0.29
PRKAR2A-205	ENST00000438535	CHD2	O14647	1828 aa	Known RBP	13.2	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	RPGRIP1L	Q68CZ1	1315 aa		13.2	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	UBAP1L	F5GYI3	381 aa		13.2	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	NKTR	P30414	1462 aa	Known RBP	13.2	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	NRXN3	Q9Y4C0	1643 aa		13.2	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	PIK3R4	Q99570	1358 aa		13.2	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	TOM1	O60784	492 aa		13.19	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	XIRP1	Q702N8	1843 aa	Known RBP	13.18	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	VGF	O15240	615 aa	Predicted RBP	13.18	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	PPL	O60437	1756 aa		13.17	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	SPATA31E1	Q6ZUB1	1445 aa		13.17	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	PROSER2	Q86WR7	435 aa	Predicted RBP	13.16	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	TMEM94	Q12767	1356 aa		13.16	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	ALK	Q9UM73	1620 aa		13.15	□□□□□ -0.3
PRKAR2A-205	ENST00000438535	IFT172	Q9UG01	1749 aa		13.14	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	PITPNM1	O00562	1244 aa		13.14	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	ANKRD30B	Q9BXX2	1392 aa		13.14	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	PTPRU	Q92729	1446 aa		13.13	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	NCOA3	Q9Y6Q9	1424 aa		13.13	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	RGL3	Q3MIN7	710 aa		13.13	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	AMOTL2	Q9Y2J4	779 aa		13.13	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	MET	P08581	1390 aa		13.12	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	PIP4K2B	P78356	416 aa		13.12	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	SSUH2	Q9Y2M2	353 aa		13.12	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	XRN1	Q8IZH2	1706 aa	Known RBP	13.12	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	SETD1A	O15047	1707 aa	Known RBP	13.11	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	RBM33	Q96EV2	1170 aa	Known RBP	13.11	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	MSH6	P52701	1360 aa		13.1	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	ZNF692	Q9BU19	519 aa	Predicted RBP	13.1	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	ADGRF5	Q8IZF2	1346 aa		13.1	□□□□□ -0.31
PRKAR2A-205	ENST00000438535	PIK3C2G	O75747	1445 aa		13.07	□□□□□ -0.32
PRKAR2A-205	ENST00000438535	TRIM26	Q12899	539 aa	Predicted RBP	13.07	□□□□□ -0.32
PRKAR2A-205	ENST00000438535	MYOM2	P54296	1465 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms