RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 E9PCH4 1651 aa19.18■□□□□ 0.66
MSH5-206ENST00000423982 ARHGEF40Q8TER5 1519 aa19.17■□□□□ 0.66
MSH5-206ENST00000423982 RNF17Q9BXT8 1623 aaKnown RBP19.16■□□□□ 0.66
MSH5-206ENST00000423982 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
MSH5-206ENST00000423982 DCAF11Q8TEB1 546 aa19.15■□□□□ 0.66
MSH5-206ENST00000423982 CARD11Q9BXL7 1154 aa19.15■□□□□ 0.66
MSH5-206ENST00000423982 VWDEQ8N2E2 1590 aa19.15■□□□□ 0.66
MSH5-206ENST00000423982 UGGT1Q9NYU2 1555 aa19.15■□□□□ 0.66
MSH5-206ENST00000423982 RTL5Q5HYW3 569 aaPredicted RBP19.15■□□□□ 0.66
MSH5-206ENST00000423982 ST20-MTHFSA0A0A6YYL1 179 aa19.14■□□□□ 0.65
MSH5-206ENST00000423982 ABCC3O15438 1527 aa19.13■□□□□ 0.65
MSH5-206ENST00000423982 TET3O43151 1660 aa19.13■□□□□ 0.65
MSH5-206ENST00000423982 RRP1P56182 461 aaKnown RBP19.13■□□□□ 0.65
MSH5-206ENST00000423982 SKAP1Q86WV1 359 aa19.13■□□□□ 0.65
MSH5-206ENST00000423982 NPATQ14207 1427 aa19.13■□□□□ 0.65
MSH5-206ENST00000423982 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
MSH5-206ENST00000423982 FBXO31Q5XUX0 539 aaPredicted RBP19.12■□□□□ 0.65
MSH5-206ENST00000423982 LAS1LQ9Y4W2 734 aaKnown RBP19.12■□□□□ 0.65
MSH5-206ENST00000423982 EFCAB6Q5THR3 1501 aa19.12■□□□□ 0.65
MSH5-206ENST00000423982 ESF1Q9H501 851 aaKnown RBP19.11■□□□□ 0.65
MSH5-206ENST00000423982 LRPPRCP42704 1394 aaKnown RBP19.1■□□□□ 0.65
MSH5-206ENST00000423982 RCAN3Q9UKA8 241 aa19.09■□□□□ 0.65
MSH5-206ENST00000423982 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.65
MSH5-206ENST00000423982 PDE4AP27815 886 aa19.07■□□□□ 0.64
MSH5-206ENST00000423982 MYBBP1AQ9BQG0 1328 aaKnown RBP19.07■□□□□ 0.64
MSH5-206ENST00000423982 PLIN1O60240 522 aa19.07■□□□□ 0.64
MSH5-206ENST00000423982 IL27Q8NEV9 243 aa19.07■□□□□ 0.64
MSH5-206ENST00000423982 SPHKAPQ2M3C7 1700 aa19.06■□□□□ 0.64
MSH5-206ENST00000423982 CAMSAP1Q5T5Y3 1602 aa19.05■□□□□ 0.64
MSH5-206ENST00000423982 CLTCL1P53675 1640 aa19.05■□□□□ 0.64
MSH5-206ENST00000423982 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
MSH5-206ENST00000423982 LMTK2Q8IWU2 1503 aa19.04■□□□□ 0.64
MSH5-206ENST00000423982 RALGAPBQ86X10 1494 aa19.04■□□□□ 0.64
MSH5-206ENST00000423982 TRPM2O94759 1503 aa19.04■□□□□ 0.64
MSH5-206ENST00000423982 ROCK2O75116 1388 aaKnown RBP19.04■□□□□ 0.64
MSH5-206ENST00000423982 PTPRTO14522 1441 aa19.04■□□□□ 0.64
MSH5-206ENST00000423982 RTN4Q9NQC3 1192 aaKnown RBP19.03■□□□□ 0.64
MSH5-206ENST00000423982 BRD4O60885 1362 aaPredicted RBP19.03■□□□□ 0.64
MSH5-206ENST00000423982 CEBPAP49715 358 aaPredicted RBP19.03■□□□□ 0.64
MSH5-206ENST00000423982 AGLP35573 1532 aa19.03■□□□□ 0.64
MSH5-206ENST00000423982 CLTCQ00610 1675 aaKnown RBP19.02■□□□□ 0.64
MSH5-206ENST00000423982 REREQ9P2R6 1566 aa19.02■□□□□ 0.64
MSH5-206ENST00000423982 NEFMP07197 916 aa19.01■□□□□ 0.63
MSH5-206ENST00000423982 BACH2Q9BYV9 841 aa19.01■□□□□ 0.63
MSH5-206ENST00000423982 UHRF1BP1Q6BDS2 1440 aa19.01■□□□□ 0.63
MSH5-206ENST00000423982 TCERG1O14776 1098 aaKnown RBP19.01■□□□□ 0.63
MSH5-206ENST00000423982 ANO8Q9HCE9 1232 aaPredicted RBP19.01■□□□□ 0.63
MSH5-206ENST00000423982 RALBP1Q15311 655 aa19■□□□□ 0.63
MSH5-206ENST00000423982 IDI1Q13907 227 aa18.99■□□□□ 0.63
MSH5-206ENST00000423982 ZMYM3Q14202 1370 aa18.97■□□□□ 0.63
MSH5-206ENST00000423982 CC2D1BQ5T0F9 858 aaKnown RBP18.96■□□□□ 0.63
MSH5-206ENST00000423982 NLRP13Q86W25 1043 aa18.95■□□□□ 0.62
MSH5-206ENST00000423982 STAG3Q9UJ98 1225 aa18.95■□□□□ 0.62
MSH5-206ENST00000423982 ZC3H13Q5T200 1668 aaKnown RBP18.95■□□□□ 0.62
MSH5-206ENST00000423982 SYNMO15061 1565 aa18.95■□□□□ 0.62
MSH5-206ENST00000423982 NBPF1Q3BBV0 1214 aa18.94■□□□□ 0.62
MSH5-206ENST00000423982 CRBNQ96SW2 442 aa18.94■□□□□ 0.62
MSH5-206ENST00000423982 NOS1P29475 1434 aa18.94■□□□□ 0.62
MSH5-206ENST00000423982 ARHGAP31Q2M1Z3 1444 aa18.93■□□□□ 0.62
MSH5-206ENST00000423982 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
MSH5-206ENST00000423982 KTN1Q86UP2 1357 aaKnown RBP18.92■□□□□ 0.62
MSH5-206ENST00000423982 PARD3Q8TEW0 1356 aa18.92■□□□□ 0.62
MSH5-206ENST00000423982 SLC4A3P48751 1232 aa18.92■□□□□ 0.62
MSH5-206ENST00000423982 PPP6R1Q9UPN7 881 aa18.92■□□□□ 0.62
MSH5-206ENST00000423982 PER1O15534 1290 aaPredicted RBP18.91■□□□□ 0.62
MSH5-206ENST00000423982 ERVK-7P63135 1459 aa18.91■□□□□ 0.62
MSH5-206ENST00000423982 MROH2AA6NES4 1674 aa18.91■□□□□ 0.62
MSH5-206ENST00000423982 PREX1Q8TCU6 1659 aa18.91■□□□□ 0.62
MSH5-206ENST00000423982 ADGRF5Q8IZF2 1346 aa18.91■□□□□ 0.62
MSH5-206ENST00000423982 PRAG1Q86YV5 1406 aa18.9■□□□□ 0.62
MSH5-206ENST00000423982 MS4A1P11836 297 aa18.88■□□□□ 0.61
MSH5-206ENST00000423982 KIF1BO60333 1816 aa18.88■□□□□ 0.61
MSH5-206ENST00000423982 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
MSH5-206ENST00000423982 SLC52A1Q9NWF4 448 aa18.87■□□□□ 0.61
MSH5-206ENST00000423982 CFAP70Q5T0N1 1121 aa18.85■□□□□ 0.61
MSH5-206ENST00000423982 DISP3Q9P2K9 1392 aa18.85■□□□□ 0.61
MSH5-206ENST00000423982 PANK3Q9H999 370 aa18.84■□□□□ 0.61
MSH5-206ENST00000423982 ADGRB3O60242 1522 aa18.84■□□□□ 0.61
MSH5-206ENST00000423982 FER1L4A9Z1Z3 1794 aa18.82■□□□□ 0.6
MSH5-206ENST00000423982 TNRQ92752 1358 aa18.82■□□□□ 0.6
MSH5-206ENST00000423982 PRKCSHP14314 528 aaPredicted RBP18.81■□□□□ 0.6
MSH5-206ENST00000423982 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
MSH5-206ENST00000423982 MYO5BQ9ULV0 1848 aa18.81■□□□□ 0.6
MSH5-206ENST00000423982 USP35Q9P2H5 1018 aa18.8■□□□□ 0.6
MSH5-206ENST00000423982 TRPM1Q7Z4N2 1603 aa18.8■□□□□ 0.6
MSH5-206ENST00000423982 MADDQ8WXG6 1647 aa18.8■□□□□ 0.6
MSH5-206ENST00000423982 PPM1GO15355 546 aaPredicted RBP18.8■□□□□ 0.6
MSH5-206ENST00000423982 TMEM132EQ6IEE7 984 aa18.8■□□□□ 0.6
MSH5-206ENST00000423982 TESK2Q96S53 571 aa18.8■□□□□ 0.6
MSH5-206ENST00000423982 BRPF3Q9ULD4 1205 aa18.8■□□□□ 0.6
MSH5-206ENST00000423982 ADAMTS8Q9UP79 889 aa18.8■□□□□ 0.6
MSH5-206ENST00000423982 SPATA31D1Q6ZQQ2 1576 aa18.79■□□□□ 0.6
MSH5-206ENST00000423982 BLMP54132 1417 aaPredicted RBP18.78■□□□□ 0.6
MSH5-206ENST00000423982 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
MSH5-206ENST00000423982 NFKBIBQ15653 356 aa18.77■□□□□ 0.59
MSH5-206ENST00000423982 RIMS1Q86UR5 1692 aaKnown RBP18.77■□□□□ 0.59
MSH5-206ENST00000423982 C3P01024 1663 aa18.76■□□□□ 0.59
MSH5-206ENST00000423982 TMEM131LA2VDJ0 1609 aa18.76■□□□□ 0.59
MSH5-206ENST00000423982 KDM2BQ8NHM5 1336 aa18.75■□□□□ 0.59
MSH5-206ENST00000423982 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms