RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 PLA2R1Q13018 1463 aa20.8■□□□□ 0.92
LIMK2-204ENST00000406516 TNRQ92752 1358 aa20.79■□□□□ 0.92
LIMK2-204ENST00000406516 ANP32EQ9BTT0 268 aa20.79■□□□□ 0.92
LIMK2-204ENST00000406516 SPATA31D1Q6ZQQ2 1576 aa20.78■□□□□ 0.92
LIMK2-204ENST00000406516 PTPRTO14522 1441 aa20.78■□□□□ 0.92
LIMK2-204ENST00000406516 ZBED9Q6R2W3 1325 aa20.78■□□□□ 0.92
LIMK2-204ENST00000406516 IDI1Q13907 227 aa20.78■□□□□ 0.92
LIMK2-204ENST00000406516 PREX1Q8TCU6 1659 aa20.77■□□□□ 0.92
LIMK2-204ENST00000406516 SYNMO15061 1565 aa20.75■□□□□ 0.91
LIMK2-204ENST00000406516 UGGT1Q9NYU2 1555 aa20.75■□□□□ 0.91
LIMK2-204ENST00000406516 SLC52A1Q9NWF4 448 aa20.73■□□□□ 0.91
LIMK2-204ENST00000406516 SPHKAPQ2M3C7 1700 aa20.7■□□□□ 0.9
LIMK2-204ENST00000406516 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
LIMK2-204ENST00000406516 CHGAP10645 457 aaKnown RBP20.7■□□□□ 0.9
LIMK2-204ENST00000406516 TRPM2O94759 1503 aa20.69■□□□□ 0.9
LIMK2-204ENST00000406516 ERICH6BQ5W0A0 696 aa20.69■□□□□ 0.9
LIMK2-204ENST00000406516 CARD11Q9BXL7 1154 aa20.69■□□□□ 0.9
LIMK2-204ENST00000406516 PPP4R2Q9NY27 417 aa20.69■□□□□ 0.9
LIMK2-204ENST00000406516 KDM2AQ9Y2K7 1162 aa20.69■□□□□ 0.9
LIMK2-204ENST00000406516 SETD1BQ9UPS6 1966 aaKnown RBP20.68■□□□□ 0.9
LIMK2-204ENST00000406516 UHRF1BP1Q6BDS2 1440 aa20.68■□□□□ 0.9
LIMK2-204ENST00000406516 RALGAPBQ86X10 1494 aa20.68■□□□□ 0.9
LIMK2-204ENST00000406516 CCDC144AA2RUR9 1427 aa20.67■□□□□ 0.9
LIMK2-204ENST00000406516 NLRP1Q9C000 1473 aa20.66■□□□□ 0.9
LIMK2-204ENST00000406516 STAG3Q9UJ98 1225 aa20.66■□□□□ 0.9
LIMK2-204ENST00000406516 CLTCL1P53675 1640 aa20.65■□□□□ 0.9
LIMK2-204ENST00000406516 MYO3AQ8NEV4 1616 aa20.65■□□□□ 0.9
LIMK2-204ENST00000406516 HSPA2P54652 639 aa20.64■□□□□ 0.9
LIMK2-204ENST00000406516 PIK3C2BO00750 1634 aa20.64■□□□□ 0.89
LIMK2-204ENST00000406516 DCAF11Q8TEB1 546 aa20.64■□□□□ 0.89
LIMK2-204ENST00000406516 A2ML1A8K2U0 1454 aa20.63■□□□□ 0.89
LIMK2-204ENST00000406516 RGL3Q3MIN7 710 aa20.62■□□□□ 0.89
LIMK2-204ENST00000406516 B4GALNT3Q6L9W6 998 aa20.62■□□□□ 0.89
LIMK2-204ENST00000406516 CEP170BQ9Y4F5 1589 aaPredicted RBP20.62■□□□□ 0.89
LIMK2-204ENST00000406516 ST20-MTHFSA0A0A6YYL1 179 aa20.61■□□□□ 0.89
LIMK2-204ENST00000406516 LMTK3Q96Q04 1460 aa20.61■□□□□ 0.89
LIMK2-204ENST00000406516 SENP3-EIF4A1A0A087X0R7 540 aa20.61■□□□□ 0.89
LIMK2-204ENST00000406516 ROCK2O75116 1388 aaKnown RBP20.6■□□□□ 0.89
LIMK2-204ENST00000406516 THEMISQ8N1K5 641 aaPredicted RBP20.6■□□□□ 0.89
LIMK2-204ENST00000406516 TMEM131LA2VDJ0 1609 aa20.57■□□□□ 0.88
LIMK2-204ENST00000406516 NUTM2DQ5VT03 806 aaPredicted RBP20.57■□□□□ 0.88
LIMK2-204ENST00000406516 SMG6Q86US8 1419 aaKnown RBP20.57■□□□□ 0.88
LIMK2-204ENST00000406516 TMC1Q8TDI8 760 aa20.57■□□□□ 0.88
LIMK2-204ENST00000406516 ADGRB3O60242 1522 aa20.56■□□□□ 0.88
LIMK2-204ENST00000406516 UBR1Q8IWV7 1749 aa20.56■□□□□ 0.88
LIMK2-204ENST00000406516 MSH5O43196 834 aa20.55■□□□□ 0.88
LIMK2-204ENST00000406516 ZNF142P52746 1687 aaPredicted RBP20.55■□□□□ 0.88
LIMK2-204ENST00000406516 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
LIMK2-204ENST00000406516 NUDCQ9Y266 331 aa20.54■□□□□ 0.88
LIMK2-204ENST00000406516 TMEM2Q9UHN6 1383 aa20.53■□□□□ 0.88
LIMK2-204ENST00000406516 LTKP29376 864 aa20.53■□□□□ 0.88
LIMK2-204ENST00000406516 SENP3Q9H4L4 574 aaPredicted RBP20.53■□□□□ 0.88
LIMK2-204ENST00000406516 MYO5BQ9ULV0 1848 aa20.52■□□□□ 0.88
LIMK2-204ENST00000406516 KIF1BO60333 1816 aa20.51■□□□□ 0.87
LIMK2-204ENST00000406516 FANCIQ9NVI1 1328 aa20.51■□□□□ 0.87
LIMK2-204ENST00000406516 TXNDC2Q86VQ3 553 aa20.51■□□□□ 0.87
LIMK2-204ENST00000406516 NCKAP5LQ9HCH0 1330 aa20.5■□□□□ 0.87
LIMK2-204ENST00000406516 RIMS2Q9UQ26 1411 aa20.5■□□□□ 0.87
LIMK2-204ENST00000406516 ANKLE2Q86XL3 938 aa20.49■□□□□ 0.87
LIMK2-204ENST00000406516 ARHGAP23Q9P227 1491 aa20.48■□□□□ 0.87
LIMK2-204ENST00000406516 KDM5AP29375 1690 aaKnown RBP20.48■□□□□ 0.87
LIMK2-204ENST00000406516 ZFYVE9O95405 1425 aa20.48■□□□□ 0.87
LIMK2-204ENST00000406516 PRAG1Q86YV5 1406 aa20.47■□□□□ 0.87
LIMK2-204ENST00000406516 EID1Q9Y6B2 187 aa20.47■□□□□ 0.87
LIMK2-204ENST00000406516 SLIT1O75093 1534 aa20.47■□□□□ 0.87
LIMK2-204ENST00000406516 MYBBP1AQ9BQG0 1328 aaKnown RBP20.47■□□□□ 0.87
LIMK2-204ENST00000406516 RPGRIP1LQ68CZ1 1315 aa20.46■□□□□ 0.87
LIMK2-204ENST00000406516 NBPF1Q3BBV0 1214 aa20.45■□□□□ 0.86
LIMK2-204ENST00000406516 RALBP1Q15311 655 aa20.45■□□□□ 0.86
LIMK2-204ENST00000406516 NEXMIFQ5QGS0 1516 aa20.45■□□□□ 0.86
LIMK2-204ENST00000406516 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
LIMK2-204ENST00000406516 ADGRF5Q8IZF2 1346 aa20.44■□□□□ 0.86
LIMK2-204ENST00000406516 BRD4O60885 1362 aaPredicted RBP20.44■□□□□ 0.86
LIMK2-204ENST00000406516 NEURL4Q96JN8 1562 aa20.44■□□□□ 0.86
LIMK2-204ENST00000406516 HDGFP51858 240 aaKnown RBP20.44■□□□□ 0.86
LIMK2-204ENST00000406516 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
LIMK2-204ENST00000406516 VGFO15240 615 aaPredicted RBP20.43■□□□□ 0.86
LIMK2-204ENST00000406516 RNF123Q5XPI4 1314 aa20.43■□□□□ 0.86
LIMK2-204ENST00000406516 LRPPRCP42704 1394 aaKnown RBP20.43■□□□□ 0.86
LIMK2-204ENST00000406516 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
LIMK2-204ENST00000406516 SCAF11Q99590 1463 aaKnown RBP20.42■□□□□ 0.86
LIMK2-204ENST00000406516 CCDC136Q96JN2 1154 aa20.39■□□□□ 0.85
LIMK2-204ENST00000406516 ERICH6Q7L0X2 663 aa20.38■□□□□ 0.85
LIMK2-204ENST00000406516 SLC26A8Q96RN1 970 aa20.38■□□□□ 0.85
LIMK2-204ENST00000406516 STRCQ7RTU9 1775 aa20.37■□□□□ 0.85
LIMK2-204ENST00000406516 PPLO60437 1756 aa20.37■□□□□ 0.85
LIMK2-204ENST00000406516 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
LIMK2-204ENST00000406516 NLRP13Q86W25 1043 aa20.36■□□□□ 0.85
LIMK2-204ENST00000406516 GPRASP1Q5JY77 1395 aa20.36■□□□□ 0.85
LIMK2-204ENST00000406516 PLEKHG1Q9ULL1 1385 aa20.36■□□□□ 0.85
LIMK2-204ENST00000406516 NPHP4O75161 1426 aaPredicted RBP20.36■□□□□ 0.85
LIMK2-204ENST00000406516 PARD3Q8TEW0 1356 aa20.35■□□□□ 0.85
LIMK2-204ENST00000406516 IFT172Q9UG01 1749 aa20.35■□□□□ 0.85
LIMK2-204ENST00000406516 MED14O60244 1454 aa20.34■□□□□ 0.85
LIMK2-204ENST00000406516 DISP3Q9P2K9 1392 aa20.34■□□□□ 0.85
LIMK2-204ENST00000406516 CFAP70Q5T0N1 1121 aa20.33■□□□□ 0.84
LIMK2-204ENST00000406516 STAC3Q96MF2 364 aa20.33■□□□□ 0.84
LIMK2-204ENST00000406516 MYOM2P54296 1465 aa20.33■□□□□ 0.84
LIMK2-204ENST00000406516 PER1O15534 1290 aaPredicted RBP20.32■□□□□ 0.84
LIMK2-204ENST00000406516 TESK2Q96S53 571 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms