RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TSPY4P0CV99 314 aa7.76□□□□□ -1.17
HDAC9-203ENST00000406072 TSPY10P0CW01 314 aa7.76□□□□□ -1.17
HDAC9-203ENST00000406072 UBE2Q2Q8WVN8 375 aa7.75□□□□□ -1.17
HDAC9-203ENST00000406072 TSPOAP1O95153 1857 aa7.75□□□□□ -1.17
HDAC9-203ENST00000406072 CLTCL1P53675 1640 aa7.75□□□□□ -1.17
HDAC9-203ENST00000406072 MYOM2P54296 1465 aa7.75□□□□□ -1.17
HDAC9-203ENST00000406072 CNTLNQ9NXG0 1405 aa7.75□□□□□ -1.17
HDAC9-203ENST00000406072 MADDQ8WXG6 1647 aa7.75□□□□□ -1.17
HDAC9-203ENST00000406072 KIF1BO60333 1816 aa7.75□□□□□ -1.17
HDAC9-203ENST00000406072 UGGT1Q9NYU2 1555 aa7.74□□□□□ -1.17
HDAC9-203ENST00000406072 NOS1P29475 1434 aa7.74□□□□□ -1.17
HDAC9-203ENST00000406072 PLA2R1Q13018 1463 aa7.74□□□□□ -1.17
HDAC9-203ENST00000406072 SPAG9O60271 1321 aaKnown RBP7.74□□□□□ -1.17
HDAC9-203ENST00000406072 TRPM1Q7Z4N2 1603 aa7.74□□□□□ -1.17
HDAC9-203ENST00000406072 PPLO60437 1756 aa7.74□□□□□ -1.17
HDAC9-203ENST00000406072 UPF2Q9HAU5 1272 aaKnown RBP7.74□□□□□ -1.17
HDAC9-203ENST00000406072 SYNMO15061 1565 aa7.73□□□□□ -1.17
HDAC9-203ENST00000406072 ZNF142P52746 1687 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-203ENST00000406072 SENP3-EIF4A1A0A087X0R7 540 aa7.73□□□□□ -1.17
HDAC9-203ENST00000406072 HNRNPMP52272 730 aaKnown RBP eCLIP7.73□□□□□ -1.17
HDAC9-203ENST00000406072 MYO3AQ8NEV4 1616 aa7.73□□□□□ -1.17
HDAC9-203ENST00000406072 KCNH8Q96L42 1107 aa7.73□□□□□ -1.17
HDAC9-203ENST00000406072 CDK11BP21127 795 aaKnown RBP7.72□□□□□ -1.17
HDAC9-203ENST00000406072 SETBP1Q9Y6X0 1596 aa7.72□□□□□ -1.17
HDAC9-203ENST00000406072 STAC3Q96MF2 364 aa7.72□□□□□ -1.17
HDAC9-203ENST00000406072 ADAMTSL3P82987 1691 aa7.72□□□□□ -1.17
HDAC9-203ENST00000406072 COL17A1Q9UMD9 1497 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-203ENST00000406072 SPATA31E1Q6ZUB1 1445 aa7.72□□□□□ -1.17
HDAC9-203ENST00000406072 ZNF326Q5BKZ1 582 aaKnown RBP7.71□□□□□ -1.17
HDAC9-203ENST00000406072 CYB5RLQ6IPT4 315 aa7.71□□□□□ -1.17
HDAC9-203ENST00000406072 TPRNQ4KMQ1 711 aa7.71□□□□□ -1.18
HDAC9-203ENST00000406072 MPHOSPH9Q99550 1183 aa7.71□□□□□ -1.18
HDAC9-203ENST00000406072 RALGAPBQ86X10 1494 aa7.71□□□□□ -1.18
HDAC9-203ENST00000406072 IQGAP1P46940 1657 aa7.71□□□□□ -1.18
HDAC9-203ENST00000406072 CLTCQ00610 1675 aaKnown RBP7.7□□□□□ -1.18
HDAC9-203ENST00000406072 CANXP27824 592 aaKnown RBP7.7□□□□□ -1.18
HDAC9-203ENST00000406072 USP35Q9P2H5 1018 aa7.7□□□□□ -1.18
HDAC9-203ENST00000406072 KANK1Q14678 1352 aa7.7□□□□□ -1.18
HDAC9-203ENST00000406072 TMEM131LA2VDJ0 1609 aa7.7□□□□□ -1.18
HDAC9-203ENST00000406072 ZFYVE9O95405 1425 aa7.7□□□□□ -1.18
HDAC9-203ENST00000406072 TONSLQ96HA7 1378 aa7.69□□□□□ -1.18
HDAC9-203ENST00000406072 YEATS2Q9ULM3 1422 aa7.69□□□□□ -1.18
HDAC9-203ENST00000406072 ARID3CA6NKF2 412 aa7.69□□□□□ -1.18
HDAC9-203ENST00000406072 NCLP19338 710 aaKnown RBP7.69□□□□□ -1.18
HDAC9-203ENST00000406072 HOMEZQ8IX15 550 aa7.69□□□□□ -1.18
HDAC9-203ENST00000406072 MSH5O43196 834 aa7.69□□□□□ -1.18
HDAC9-203ENST00000406072 BECN1Q14457 450 aa7.69□□□□□ -1.18
HDAC9-203ENST00000406072 GSE1Q14687 1217 aa7.69□□□□□ -1.18
HDAC9-203ENST00000406072 L1TD1Q5T7N2 865 aaKnown RBP7.69□□□□□ -1.18
HDAC9-203ENST00000406072 ARID3AQ99856 593 aa7.69□□□□□ -1.18
HDAC9-203ENST00000406072 FER1L4A9Z1Z3 1794 aa7.69□□□□□ -1.18
HDAC9-203ENST00000406072 TMC1Q8TDI8 760 aa7.68□□□□□ -1.18
HDAC9-203ENST00000406072 SETD1AO15047 1707 aaKnown RBP7.68□□□□□ -1.18
HDAC9-203ENST00000406072 GPRASP1Q5JY77 1395 aa7.68□□□□□ -1.18
HDAC9-203ENST00000406072 PRAG1Q86YV5 1406 aa7.68□□□□□ -1.18
HDAC9-203ENST00000406072 KNDC1Q76NI1 1749 aa7.67□□□□□ -1.18
HDAC9-203ENST00000406072 FAM69CQ0P6D2 419 aa7.67□□□□□ -1.18
HDAC9-203ENST00000406072 NUP155O75694 1391 aa7.67□□□□□ -1.18
HDAC9-203ENST00000406072 ERVK-7P63135 1459 aa7.67□□□□□ -1.18
HDAC9-203ENST00000406072 NPATQ14207 1427 aa7.67□□□□□ -1.18
HDAC9-203ENST00000406072 BRPF3Q9ULD4 1205 aa7.67□□□□□ -1.18
HDAC9-203ENST00000406072 C3P01024 1663 aa7.67□□□□□ -1.18
HDAC9-203ENST00000406072 CCER2I3L3R5 266 aa7.66□□□□□ -1.18
HDAC9-203ENST00000406072 NEXMIFQ5QGS0 1516 aa7.66□□□□□ -1.18
HDAC9-203ENST00000406072 RRP7BPQ9NSQ0 103 aa7.66□□□□□ -1.18
HDAC9-203ENST00000406072 UBR1Q8IWV7 1749 aa7.65□□□□□ -1.18
HDAC9-203ENST00000406072 HAP1P54257 671 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-203ENST00000406072 AFAP1Q8N556 730 aa7.65□□□□□ -1.18
HDAC9-203ENST00000406072 ZNF777Q9ULD5 760 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-203ENST00000406072 PAK3O75914 559 aaPredicted RBP7.64□□□□□ -1.19
HDAC9-203ENST00000406072 DNTTIP2Q5QJE6 756 aaKnown RBP7.64□□□□□ -1.19
HDAC9-203ENST00000406072 DIP2AQ14689 1571 aa7.64□□□□□ -1.19
HDAC9-203ENST00000406072 NLRP1Q9C000 1473 aa7.63□□□□□ -1.19
HDAC9-203ENST00000406072 CCDC144AA2RUR9 1427 aa7.63□□□□□ -1.19
HDAC9-203ENST00000406072 TAOK2Q9UL54 1235 aa7.63□□□□□ -1.19
HDAC9-203ENST00000406072 SLIT1O75093 1534 aa7.62□□□□□ -1.19
HDAC9-203ENST00000406072 SLC4A1APQ9BWU0 796 aaKnown RBP7.62□□□□□ -1.19
HDAC9-203ENST00000406072 CHIC2Q9UKJ5 165 aa7.62□□□□□ -1.19
HDAC9-203ENST00000406072 GZF1Q9H116 711 aaPredicted RBP7.62□□□□□ -1.19
HDAC9-203ENST00000406072 PPP1R15AO75807 674 aaPredicted RBP7.62□□□□□ -1.19
HDAC9-203ENST00000406072 RGS3P49796 1198 aa7.62□□□□□ -1.19
HDAC9-203ENST00000406072 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.62□□□□□ -1.19
HDAC9-203ENST00000406072 RPGRIP1LQ68CZ1 1315 aa7.61□□□□□ -1.19
HDAC9-203ENST00000406072 DLC1Q96QB1 1528 aa7.61□□□□□ -1.19
HDAC9-203ENST00000406072 RIMS1Q86UR5 1692 aaKnown RBP7.61□□□□□ -1.19
HDAC9-203ENST00000406072 NRXN3Q9Y4C0 1643 aa7.61□□□□□ -1.19
HDAC9-203ENST00000406072 ADGRB1O14514 1584 aa7.6□□□□□ -1.19
HDAC9-203ENST00000406072 ARHGAP23Q9P227 1491 aa7.6□□□□□ -1.19
HDAC9-203ENST00000406072 MYO5BQ9ULV0 1848 aa7.6□□□□□ -1.19
HDAC9-203ENST00000406072 PTMAP06454 111 aaKnown RBP7.6□□□□□ -1.19
HDAC9-203ENST00000406072 MSNP26038 577 aaKnown RBP7.6□□□□□ -1.19
HDAC9-203ENST00000406072 ZMYND15Q9H091 742 aa7.6□□□□□ -1.19
HDAC9-203ENST00000406072 PIK3C2GO75747 1445 aa7.6□□□□□ -1.19
HDAC9-203ENST00000406072 TCERG1O14776 1098 aaKnown RBP7.59□□□□□ -1.19
HDAC9-203ENST00000406072 SIN3AQ96ST3 1273 aa7.59□□□□□ -1.19
HDAC9-203ENST00000406072 SLC4A3P48751 1232 aa7.59□□□□□ -1.19
HDAC9-203ENST00000406072 PKD2Q13563 968 aa7.59□□□□□ -1.19
HDAC9-203ENST00000406072 SLKQ9H2G2 1235 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-203ENST00000406072 ARHGEF28Q8N1W1 1705 aaKnown RBP7.58□□□□□ -1.2
HDAC9-203ENST00000406072 GOLGA6L3A6NEY3 463 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms