RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 CLTCL1P53675 1640 aa14.32□□□□□ -0.12
BRF1-204ENST00000392557 POGZQ7Z3K3 1410 aa14.32□□□□□ -0.12
BRF1-204ENST00000392557 NEFMP07197 916 aa14.32□□□□□ -0.12
BRF1-204ENST00000392557 KIDINS220Q9ULH0 1771 aa14.32□□□□□ -0.12
BRF1-204ENST00000392557 TRPM2O94759 1503 aa14.31□□□□□ -0.12
BRF1-204ENST00000392557 RRP1P56182 461 aaKnown RBP14.31□□□□□ -0.12
BRF1-204ENST00000392557 KNSTRNQ9Y448 316 aa14.31□□□□□ -0.12
BRF1-204ENST00000392557 TRAK1Q9UPV9 953 aa14.31□□□□□ -0.12
BRF1-204ENST00000392557 SPHKAPQ2M3C7 1700 aa14.3□□□□□ -0.12
BRF1-204ENST00000392557 MLECQ14165 292 aa14.3□□□□□ -0.12
BRF1-204ENST00000392557 TMEM132EQ6IEE7 984 aa14.3□□□□□ -0.12
BRF1-204ENST00000392557 PTPRTO14522 1441 aa14.3□□□□□ -0.12
BRF1-204ENST00000392557 TET3O43151 1660 aa14.29□□□□□ -0.12
BRF1-204ENST00000392557 EIF2AK4Q9P2K8 1649 aaKnown RBP14.29□□□□□ -0.12
BRF1-204ENST00000392557 NLRP13Q86W25 1043 aa14.29□□□□□ -0.12
BRF1-204ENST00000392557 CDCA7LQ96GN5 454 aa14.29□□□□□ -0.12
BRF1-204ENST00000392557 SKAP1Q86WV1 359 aa14.28□□□□□ -0.12
BRF1-204ENST00000392557 COL17A1Q9UMD9 1497 aaPredicted RBP14.28□□□□□ -0.12
BRF1-204ENST00000392557 PRDM15P57071 1507 aaPredicted RBP14.28□□□□□ -0.12
BRF1-204ENST00000392557 PER1O15534 1290 aaPredicted RBP14.28□□□□□ -0.12
BRF1-204ENST00000392557 PDE4AP27815 886 aa14.28□□□□□ -0.12
BRF1-204ENST00000392557 SAFB2Q14151 953 aaKnown RBP eCLIP14.27□□□□□ -0.12
BRF1-204ENST00000392557 EIF5BO60841 1220 aaKnown RBP14.27□□□□□ -0.13
BRF1-204ENST00000392557 NOS1P29475 1434 aa14.26□□□□□ -0.13
BRF1-204ENST00000392557 DEPDC5O75140 1603 aa14.26□□□□□ -0.13
BRF1-204ENST00000392557 CDCA8Q53HL2 280 aa14.26□□□□□ -0.13
BRF1-204ENST00000392557 CEP152O94986 1710 aa14.26□□□□□ -0.13
BRF1-204ENST00000392557 TCERG1O14776 1098 aaKnown RBP14.25□□□□□ -0.13
BRF1-204ENST00000392557 NPATQ14207 1427 aa14.25□□□□□ -0.13
BRF1-204ENST00000392557 MROH1Q8NDA8 1641 aa14.25□□□□□ -0.13
BRF1-204ENST00000392557 BRD4O60885 1362 aaPredicted RBP14.24□□□□□ -0.13
BRF1-204ENST00000392557 EIF3AQ14152 1382 aaKnown RBP14.24□□□□□ -0.13
BRF1-204ENST00000392557 SCAF11Q99590 1463 aaKnown RBP14.24□□□□□ -0.13
BRF1-204ENST00000392557 YEATS2Q9ULM3 1422 aa14.24□□□□□ -0.13
BRF1-204ENST00000392557 STAG3Q9UJ98 1225 aa14.24□□□□□ -0.13
BRF1-204ENST00000392557 MADDQ8WXG6 1647 aa14.24□□□□□ -0.13
BRF1-204ENST00000392557 HECW2Q9P2P5 1572 aa14.24□□□□□ -0.13
BRF1-204ENST00000392557 EFCAB6Q5THR3 1501 aa14.24□□□□□ -0.13
BRF1-204ENST00000392557 STK26Q9P289 416 aa14.23□□□□□ -0.13
BRF1-204ENST00000392557 PPRC1Q5VV67 1664 aaKnown RBP14.23□□□□□ -0.13
BRF1-204ENST00000392557 MLH3Q9UHC1 1453 aa14.23□□□□□ -0.13
BRF1-204ENST00000392557 STAC3Q96MF2 364 aa14.23□□□□□ -0.13
BRF1-204ENST00000392557 SLC4A3P48751 1232 aa14.22□□□□□ -0.13
BRF1-204ENST00000392557 VWDEQ8N2E2 1590 aa14.22□□□□□ -0.13
BRF1-204ENST00000392557 CFAP74Q9C0B2 1584 aa14.22□□□□□ -0.13
BRF1-204ENST00000392557 TNNT2P45379 298 aaPredicted RBP14.22□□□□□ -0.13
BRF1-204ENST00000392557 PARD3Q8TEW0 1356 aa14.21□□□□□ -0.14
BRF1-204ENST00000392557 FBXO31Q5XUX0 539 aaPredicted RBP14.21□□□□□ -0.14
BRF1-204ENST00000392557 CRBNQ96SW2 442 aa14.21□□□□□ -0.14
BRF1-204ENST00000392557 ABCA6Q8N139 1617 aa14.2□□□□□ -0.14
BRF1-204ENST00000392557 NEO1Q92859 1461 aa14.2□□□□□ -0.14
BRF1-204ENST00000392557 TSPOAP1O95153 1857 aa14.2□□□□□ -0.14
BRF1-204ENST00000392557 IDI1Q13907 227 aa14.2□□□□□ -0.14
BRF1-204ENST00000392557 FRMPD1Q5SYB0 1578 aa14.2□□□□□ -0.14
BRF1-204ENST00000392557 RNF17Q9BXT8 1623 aaKnown RBP14.2□□□□□ -0.14
BRF1-204ENST00000392557 KIF1BO60333 1816 aa14.19□□□□□ -0.14
BRF1-204ENST00000392557 WDR43Q15061 677 aaKnown RBP eCLIP14.19□□□□□ -0.14
BRF1-204ENST00000392557 RGS3P49796 1198 aa14.19□□□□□ -0.14
BRF1-204ENST00000392557 CENPJQ9HC77 1338 aaPredicted RBP14.19□□□□□ -0.14
BRF1-204ENST00000392557 IL27Q8NEV9 243 aa14.18□□□□□ -0.14
BRF1-204ENST00000392557 RNF123Q5XPI4 1314 aa14.18□□□□□ -0.14
BRF1-204ENST00000392557 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
BRF1-204ENST00000392557 PPP2R1AP30153 589 aa14.16□□□□□ -0.14
BRF1-204ENST00000392557 LAMC1P11047 1609 aa14.16□□□□□ -0.14
BRF1-204ENST00000392557 BACH2Q9BYV9 841 aa14.16□□□□□ -0.14
BRF1-204ENST00000392557 MROH2AA6NES4 1674 aa14.16□□□□□ -0.14
BRF1-204ENST00000392557 VGFO15240 615 aaPredicted RBP14.16□□□□□ -0.14
BRF1-204ENST00000392557 ADAMTS8Q9UP79 889 aa14.16□□□□□ -0.14
BRF1-204ENST00000392557 ABCC3O15438 1527 aa14.15□□□□□ -0.14
BRF1-204ENST00000392557 RIMBP3CA6NJZ7 1639 aa14.15□□□□□ -0.14
BRF1-204ENST00000392557 RIMBP3BA6NNM3 1639 aa14.15□□□□□ -0.14
BRF1-204ENST00000392557 RIMBP3Q9UFD9 1639 aa14.15□□□□□ -0.14
BRF1-204ENST00000392557 PDE3BQ13370 1112 aa14.15□□□□□ -0.14
BRF1-204ENST00000392557 PPM1GO15355 546 aaPredicted RBP14.15□□□□□ -0.14
BRF1-204ENST00000392557 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
BRF1-204ENST00000392557 SLC12A5Q9H2X9 1139 aa14.15□□□□□ -0.14
BRF1-204ENST00000392557 MAP3K4Q9Y6R4 1608 aa14.15□□□□□ -0.15
BRF1-204ENST00000392557 CCDC146Q8IYE0 955 aa14.14□□□□□ -0.15
BRF1-204ENST00000392557 ESF1Q9H501 851 aaKnown RBP14.14□□□□□ -0.15
BRF1-204ENST00000392557 C14orf93Q9H972 538 aaKnown RBP14.14□□□□□ -0.15
BRF1-204ENST00000392557 LRPPRCP42704 1394 aaKnown RBP14.14□□□□□ -0.15
BRF1-204ENST00000392557 DIP2CQ9Y2E4 1556 aa14.13□□□□□ -0.15
BRF1-204ENST00000392557 IQGAP1P46940 1657 aa14.13□□□□□ -0.15
BRF1-204ENST00000392557 NEUROD2Q15784 382 aa14.13□□□□□ -0.15
BRF1-204ENST00000392557 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
BRF1-204ENST00000392557 C20orf194Q5TEA3 1177 aa14.12□□□□□ -0.15
BRF1-204ENST00000392557 LMTK2Q8IWU2 1503 aa14.12□□□□□ -0.15
BRF1-204ENST00000392557 MYOM2P54296 1465 aa14.12□□□□□ -0.15
BRF1-204ENST00000392557 CANXP27824 592 aaKnown RBP14.11□□□□□ -0.15
BRF1-204ENST00000392557 CARD14Q9BXL6 1004 aa14.11□□□□□ -0.15
BRF1-204ENST00000392557 CABP2Q9NPB3 220 aa14.11□□□□□ -0.15
BRF1-204ENST00000392557 SRPK2P78362 688 aaKnown RBP14.1□□□□□ -0.15
BRF1-204ENST00000392557 POGKQ9P215 609 aa14.1□□□□□ -0.15
BRF1-204ENST00000392557 MS4A1P11836 297 aa14.1□□□□□ -0.15
BRF1-204ENST00000392557 ANO8Q9HCE9 1232 aaPredicted RBP14.1□□□□□ -0.15
BRF1-204ENST00000392557 ADGRB3O60242 1522 aa14.09□□□□□ -0.15
BRF1-204ENST00000392557 RPGRIP1LQ68CZ1 1315 aa14.09□□□□□ -0.15
BRF1-204ENST00000392557 SLC52A1Q9NWF4 448 aa14.09□□□□□ -0.15
BRF1-204ENST00000392557 ERVK-7P63135 1459 aa14.09□□□□□ -0.15
BRF1-204ENST00000392557 MINK1Q8N4C8 1332 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms