RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ARHGEF5Q12774 1597 aa19.46■□□□□ 0.71
PTBP1-201ENST00000349038 BCAR3O75815 825 aa19.46■□□□□ 0.71
PTBP1-201ENST00000349038 MYH16Q9H6N6 1097 aa19.46■□□□□ 0.71
PTBP1-201ENST00000349038 LAMC1P11047 1609 aa19.44■□□□□ 0.7
PTBP1-201ENST00000349038 UPF2Q9HAU5 1272 aaKnown RBP19.44■□□□□ 0.7
PTBP1-201ENST00000349038 ADAMTS8Q9UP79 889 aa19.44■□□□□ 0.7
PTBP1-201ENST00000349038 ABCA8O94911 1581 aa19.44■□□□□ 0.7
PTBP1-201ENST00000349038 FAM135AQ9P2D6 1515 aa19.44■□□□□ 0.7
PTBP1-201ENST00000349038 WDR43Q15061 677 aaKnown RBP eCLIP19.44■□□□□ 0.78e-6■■□□□ 11.7
PTBP1-201ENST00000349038 PLEKHH2Q8IVE3 1493 aa19.43■□□□□ 0.7
PTBP1-201ENST00000349038 TSPY4P0CV99 314 aa19.43■□□□□ 0.7
PTBP1-201ENST00000349038 TSPY10P0CW01 314 aa19.43■□□□□ 0.7
PTBP1-201ENST00000349038 COG6Q9Y2V7 657 aa19.42■□□□□ 0.7
PTBP1-201ENST00000349038 CARMIL2Q6F5E8 1435 aa19.42■□□□□ 0.7
PTBP1-201ENST00000349038 PRDM15P57071 1507 aaPredicted RBP19.41■□□□□ 0.7
PTBP1-201ENST00000349038 RRP9O43818 475 aaKnown RBP19.41■□□□□ 0.7
PTBP1-201ENST00000349038 BCL2L13Q9BXK5 485 aa19.41■□□□□ 0.7
PTBP1-201ENST00000349038 FAM13BQ9NYF5 915 aa19.41■□□□□ 0.7
PTBP1-201ENST00000349038 PLEKHD1A6NEE1 506 aa19.41■□□□□ 0.7
PTBP1-201ENST00000349038 IGHDP01880 384 aa19.41■□□□□ 0.7
PTBP1-201ENST00000349038 CLUAP1Q96AJ1 413 aa19.41■□□□□ 0.7
PTBP1-201ENST00000349038 ATP10BO94823 1461 aa19.4■□□□□ 0.7
PTBP1-201ENST00000349038 NBPF1Q3BBV0 1214 aa19.39■□□□□ 0.69
PTBP1-201ENST00000349038 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.39■□□□□ 0.69
PTBP1-201ENST00000349038 TESK2Q96S53 571 aa19.39■□□□□ 0.69
PTBP1-201ENST00000349038 ERCC6L2Q5T890 1561 aa19.39■□□□□ 0.69
PTBP1-201ENST00000349038 DISP3Q9P2K9 1392 aa19.39■□□□□ 0.69
PTBP1-201ENST00000349038 PANK1Q8TE04 598 aa19.39■□□□□ 0.69
PTBP1-201ENST00000349038 CCDC144AA2RUR9 1427 aa19.38■□□□□ 0.69
PTBP1-201ENST00000349038 MFAP1P55081 439 aaKnown RBP19.38■□□□□ 0.69
PTBP1-201ENST00000349038 A2MP01023 1474 aa19.38■□□□□ 0.69
PTBP1-201ENST00000349038 TRAK2O60296 914 aa19.37■□□□□ 0.69
PTBP1-201ENST00000349038 PLA2R1Q13018 1463 aa19.37■□□□□ 0.69
PTBP1-201ENST00000349038 ESPNB1AK53 854 aa19.37■□□□□ 0.69
PTBP1-201ENST00000349038 KDM2BQ8NHM5 1336 aa19.37■□□□□ 0.69
PTBP1-201ENST00000349038 HNRNPMP52272 730 aaKnown RBP eCLIP19.36■□□□□ 0.694e-7■■■■□ 20
PTBP1-201ENST00000349038 PANK3Q9H999 370 aa19.36■□□□□ 0.69
PTBP1-201ENST00000349038 CCDC141Q6ZP82 1450 aa19.35■□□□□ 0.69
PTBP1-201ENST00000349038 ERBINQ96RT1 1412 aa19.35■□□□□ 0.69
PTBP1-201ENST00000349038 AMER1Q5JTC6 1135 aaPredicted RBP19.35■□□□□ 0.69
PTBP1-201ENST00000349038 JPH4Q96JJ6 628 aa19.35■□□□□ 0.69
PTBP1-201ENST00000349038 PRDM10Q9NQV6 1147 aa19.35■□□□□ 0.69
PTBP1-201ENST00000349038 CLCN1P35523 988 aa19.34■□□□□ 0.69
PTBP1-201ENST00000349038 TBC1D2Q9BYX2 928 aa19.34■□□□□ 0.69
PTBP1-201ENST00000349038 ERBB4Q15303 1308 aa19.34■□□□□ 0.69
PTBP1-201ENST00000349038 UNC13BO14795 1591 aa19.34■□□□□ 0.69
PTBP1-201ENST00000349038 SAMD9LQ8IVG5 1584 aa19.33■□□□□ 0.68
PTBP1-201ENST00000349038 EIF2AK4Q9P2K8 1649 aaKnown RBP19.32■□□□□ 0.68
PTBP1-201ENST00000349038 MCM4P33991 863 aa19.32■□□□□ 0.68
PTBP1-201ENST00000349038 NCLP19338 710 aaKnown RBP19.32■□□□□ 0.68
PTBP1-201ENST00000349038 KIAA1211Q6ZU35 1233 aa19.32■□□□□ 0.68
PTBP1-201ENST00000349038 GOLGA2Q08379 1002 aa19.31■□□□□ 0.68
PTBP1-201ENST00000349038 GRPEL1Q9HAV7 217 aa19.3■□□□□ 0.68
PTBP1-201ENST00000349038 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
PTBP1-201ENST00000349038 APAF1O14727 1248 aa19.28■□□□□ 0.68
PTBP1-201ENST00000349038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.28■□□□□ 0.681e-7■■□□□ 14.5
PTBP1-201ENST00000349038 PREX2Q70Z35 1606 aa19.28■□□□□ 0.68
PTBP1-201ENST00000349038 TNNT2P45379 298 aaPredicted RBP19.28■□□□□ 0.68
PTBP1-201ENST00000349038 SPINK5Q9NQ38 1064 aaPredicted RBP19.28■□□□□ 0.68
PTBP1-201ENST00000349038 ZHX1Q9UKY1 873 aaPredicted RBP19.28■□□□□ 0.68
PTBP1-201ENST00000349038 CDC42BPBQ9Y5S2 1711 aa19.28■□□□□ 0.68
PTBP1-201ENST00000349038 MAST1Q9Y2H9 1570 aa19.27■□□□□ 0.68
PTBP1-201ENST00000349038 TMF1P82094 1093 aa19.27■□□□□ 0.68
PTBP1-201ENST00000349038 RSPH4AQ5TD94 716 aa19.27■□□□□ 0.68
PTBP1-201ENST00000349038 RNF17Q9BXT8 1623 aaKnown RBP19.27■□□□□ 0.67
PTBP1-201ENST00000349038 PLEKHH1Q9ULM0 1364 aa19.27■□□□□ 0.67
PTBP1-201ENST00000349038 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
PTBP1-201ENST00000349038 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
PTBP1-201ENST00000349038 RRP7AQ9Y3A4 280 aaKnown RBP19.26■□□□□ 0.67
PTBP1-201ENST00000349038 USP19O94966 1318 aa19.26■□□□□ 0.67
PTBP1-201ENST00000349038 TPRNQ4KMQ1 711 aa19.26■□□□□ 0.67
PTBP1-201ENST00000349038 ZNF521Q96K83 1311 aa19.26■□□□□ 0.67
PTBP1-201ENST00000349038 IQGAP3Q86VI3 1631 aa19.26■□□□□ 0.67
PTBP1-201ENST00000349038 R3HCC1Q9Y3T6 440 aaKnown RBP19.26■□□□□ 0.67
PTBP1-201ENST00000349038 ATP10AO60312 1499 aa19.25■□□□□ 0.67
PTBP1-201ENST00000349038 TNNQ9UQP3 1299 aa19.24■□□□□ 0.67
PTBP1-201ENST00000349038 MAGI2Q86UL8 1455 aa19.24■□□□□ 0.67
PTBP1-201ENST00000349038 WDR7Q9Y4E6 1490 aa19.24■□□□□ 0.67
PTBP1-201ENST00000349038 MRE11P49959 708 aa19.23■□□□□ 0.67
PTBP1-201ENST00000349038 MPNDQ8N594 471 aa19.22■□□□□ 0.67
PTBP1-201ENST00000349038 PPP2R1AP30153 589 aa19.21■□□□□ 0.67
PTBP1-201ENST00000349038 SYCP2Q9BX26 1530 aa19.21■□□□□ 0.67
PTBP1-201ENST00000349038 PLXNC1O60486 1568 aa19.2■□□□□ 0.66
PTBP1-201ENST00000349038 MSNP26038 577 aaKnown RBP19.2■□□□□ 0.66
PTBP1-201ENST00000349038 GAS2L3Q86XJ1 694 aa19.2■□□□□ 0.66
PTBP1-201ENST00000349038 ANP32BQ92688 251 aaKnown RBP19.2■□□□□ 0.66
PTBP1-201ENST00000349038 KNSTRNQ9Y448 316 aa19.19■□□□□ 0.66
PTBP1-201ENST00000349038 DMRT2Q9Y5R5 561 aa19.18■□□□□ 0.66
PTBP1-201ENST00000349038 HSCBQ8IWL3 235 aa19.17■□□□□ 0.66
PTBP1-201ENST00000349038 ANTXR1Q9H6X2 564 aa19.17■□□□□ 0.66
PTBP1-201ENST00000349038 PDZRN3Q9UPQ7 1066 aa19.17■□□□□ 0.66
PTBP1-201ENST00000349038 IQGAP1P46940 1657 aa19.16■□□□□ 0.66
PTBP1-201ENST00000349038 HSP90AB1P08238 724 aaKnown RBP19.16■□□□□ 0.66
PTBP1-201ENST00000349038 SLFN5Q08AF3 891 aa19.16■□□□□ 0.66
PTBP1-201ENST00000349038 TRMT2AQ8IZ69 625 aaKnown RBP19.16■□□□□ 0.66
PTBP1-201ENST00000349038 PIK3C2GO75747 1445 aa19.16■□□□□ 0.66
PTBP1-201ENST00000349038 CHMP5Q9NZZ3 219 aa19.16■□□□□ 0.66
PTBP1-201ENST00000349038 SYNMO15061 1565 aa19.15■□□□□ 0.66
PTBP1-201ENST00000349038 C22orf23Q9BZE7 217 aa19.14■□□□□ 0.65
PTBP1-201ENST00000349038 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms