RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 PNISRQ8TF01 805 aaKnown RBP23.09■■□□□ 1.29
SMARCC2-202ENST00000347471 CENPJQ9HC77 1338 aaPredicted RBP23.08■■□□□ 1.29
SMARCC2-202ENST00000347471 STAC3Q96MF2 364 aa23.08■■□□□ 1.29
SMARCC2-202ENST00000347471 PER1O15534 1290 aaPredicted RBP23.08■■□□□ 1.28
SMARCC2-202ENST00000347471 ABCA6Q8N139 1617 aa23.07■■□□□ 1.28
SMARCC2-202ENST00000347471 EFCAB6Q5THR3 1501 aa23.07■■□□□ 1.28
SMARCC2-202ENST00000347471 CEP152O94986 1710 aa23.07■■□□□ 1.28
SMARCC2-202ENST00000347471 CFAP74Q9C0B2 1584 aa23.07■■□□□ 1.28
SMARCC2-202ENST00000347471 SPHKAPQ2M3C7 1700 aa23.07■■□□□ 1.28
SMARCC2-202ENST00000347471 SCAF11Q99590 1463 aaKnown RBP23.07■■□□□ 1.28
SMARCC2-202ENST00000347471 FRMPD1Q5SYB0 1578 aa23.06■■□□□ 1.28
SMARCC2-202ENST00000347471 POGKQ9P215 609 aa23.06■■□□□ 1.28
SMARCC2-202ENST00000347471 MROH1Q8NDA8 1641 aa23.05■■□□□ 1.28
SMARCC2-202ENST00000347471 PPRC1Q5VV67 1664 aaKnown RBP23.05■■□□□ 1.28
SMARCC2-202ENST00000347471 SLC12A5Q9H2X9 1139 aa23.04■■□□□ 1.28
SMARCC2-202ENST00000347471 COL17A1Q9UMD9 1497 aaPredicted RBP23.03■■□□□ 1.28
SMARCC2-202ENST00000347471 SRPK2P78362 688 aaKnown RBP23.03■■□□□ 1.28
SMARCC2-202ENST00000347471 ZBED9Q6R2W3 1325 aa23.03■■□□□ 1.28
SMARCC2-202ENST00000347471 MINK1Q8N4C8 1332 aaPredicted RBP23.02■■□□□ 1.28
SMARCC2-202ENST00000347471 SLC52A1Q9NWF4 448 aa23.02■■□□□ 1.28
SMARCC2-202ENST00000347471 EIF2AK4Q9P2K8 1649 aaKnown RBP23.02■■□□□ 1.27
SMARCC2-202ENST00000347471 CABP2Q9NPB3 220 aa23.01■■□□□ 1.27
SMARCC2-202ENST00000347471 WDR43Q15061 677 aaKnown RBP eCLIP23.01■■□□□ 1.279e-6■■■□□ 15.6
SMARCC2-202ENST00000347471 ABCC3O15438 1527 aa23.01■■□□□ 1.27
SMARCC2-202ENST00000347471 DEPDC5O75140 1603 aa23.01■■□□□ 1.27
SMARCC2-202ENST00000347471 C14orf93Q9H972 538 aaKnown RBP23.01■■□□□ 1.27
SMARCC2-202ENST00000347471 RNF17Q9BXT8 1623 aaKnown RBP22.99■■□□□ 1.27
SMARCC2-202ENST00000347471 DIP2CQ9Y2E4 1556 aa22.99■■□□□ 1.27
SMARCC2-202ENST00000347471 VWDEQ8N2E2 1590 aa22.99■■□□□ 1.27
SMARCC2-202ENST00000347471 CEBPAP49715 358 aaPredicted RBP22.98■■□□□ 1.27
SMARCC2-202ENST00000347471 MADDQ8WXG6 1647 aa22.96■■□□□ 1.27
SMARCC2-202ENST00000347471 CCDC146Q8IYE0 955 aa22.95■■□□□ 1.26
SMARCC2-202ENST00000347471 BRD4O60885 1362 aaPredicted RBP22.95■■□□□ 1.26
SMARCC2-202ENST00000347471 PRAM1Q96QH2 718 aa22.93■■□□□ 1.26
SMARCC2-202ENST00000347471 DIP2BQ9P265 1576 aa22.93■■□□□ 1.26
SMARCC2-202ENST00000347471 RPGRIP1LQ68CZ1 1315 aa22.93■■□□□ 1.26
SMARCC2-202ENST00000347471 PPP2R1AP30153 589 aa22.93■■□□□ 1.26
SMARCC2-202ENST00000347471 ADAMTS8Q9UP79 889 aa22.91■■□□□ 1.26
SMARCC2-202ENST00000347471 MORC1Q86VD1 984 aa22.91■■□□□ 1.26
SMARCC2-202ENST00000347471 AMER1Q5JTC6 1135 aaPredicted RBP22.9■■□□□ 1.26
SMARCC2-202ENST00000347471 CARD14Q9BXL6 1004 aa22.9■■□□□ 1.26
SMARCC2-202ENST00000347471 PARD3Q8TEW0 1356 aa22.89■■□□□ 1.26
SMARCC2-202ENST00000347471 MAP3K4Q9Y6R4 1608 aa22.89■■□□□ 1.26
SMARCC2-202ENST00000347471 CDCA7LQ96GN5 454 aa22.89■■□□□ 1.25
SMARCC2-202ENST00000347471 NEUROD2Q15784 382 aa22.89■■□□□ 1.25
SMARCC2-202ENST00000347471 KIF1BO60333 1816 aa22.88■■□□□ 1.25
SMARCC2-202ENST00000347471 B4GALNT3Q6L9W6 998 aa22.88■■□□□ 1.25
SMARCC2-202ENST00000347471 NUTM2FA1L443 756 aa22.88■■□□□ 1.25
SMARCC2-202ENST00000347471 WAPLQ7Z5K2 1190 aa22.88■■□□□ 1.25
SMARCC2-202ENST00000347471 NUDCQ9Y266 331 aa22.87■■□□□ 1.25
SMARCC2-202ENST00000347471 LMTK2Q8IWU2 1503 aa22.87■■□□□ 1.25
SMARCC2-202ENST00000347471 EVC2Q86UK5 1308 aa22.86■■□□□ 1.25
SMARCC2-202ENST00000347471 MROH2AA6NES4 1674 aa22.85■■□□□ 1.25
SMARCC2-202ENST00000347471 SLC24A1O60721 1099 aa22.85■■□□□ 1.25
SMARCC2-202ENST00000347471 POLR1AO95602 1720 aaPredicted RBP22.84■■□□□ 1.25
SMARCC2-202ENST00000347471 RICTORQ6R327 1708 aa22.84■■□□□ 1.25
SMARCC2-202ENST00000347471 MYOM2P54296 1465 aa22.83■■□□□ 1.25
SMARCC2-202ENST00000347471 PIK3C2GO75747 1445 aa22.82■■□□□ 1.24
SMARCC2-202ENST00000347471 ADGRB3O60242 1522 aa22.81■■□□□ 1.24
SMARCC2-202ENST00000347471 PPM1GO15355 546 aaPredicted RBP22.81■■□□□ 1.24
SMARCC2-202ENST00000347471 TXNDC2Q86VQ3 553 aa22.81■■□□□ 1.24
SMARCC2-202ENST00000347471 GLI2P10070 1586 aa22.81■■□□□ 1.24
SMARCC2-202ENST00000347471 CAMSAP1Q5T5Y3 1602 aa22.81■■□□□ 1.24
SMARCC2-202ENST00000347471 ERVK-7P63135 1459 aa22.8■■□□□ 1.24
SMARCC2-202ENST00000347471 GGNBP2Q9H3C7 697 aa22.8■■□□□ 1.24
SMARCC2-202ENST00000347471 ZMYM3Q14202 1370 aa22.8■■□□□ 1.24
SMARCC2-202ENST00000347471 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.79■■□□□ 1.24
SMARCC2-202ENST00000347471 NSD3Q9BZ95 1437 aa22.79■■□□□ 1.24
SMARCC2-202ENST00000347471 SYNMO15061 1565 aa22.77■■□□□ 1.24
SMARCC2-202ENST00000347471 SLC26A8Q96RN1 970 aa22.76■■□□□ 1.23
SMARCC2-202ENST00000347471 RRP7AQ9Y3A4 280 aaKnown RBP22.76■■□□□ 1.23
SMARCC2-202ENST00000347471 APAF1O14727 1248 aa22.75■■□□□ 1.23
SMARCC2-202ENST00000347471 SIGLEC1Q9BZZ2 1709 aa22.74■■□□□ 1.23
SMARCC2-202ENST00000347471 CDK19Q9BWU1 502 aa22.74■■□□□ 1.23
SMARCC2-202ENST00000347471 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
SMARCC2-202ENST00000347471 CABP1Q9NZU7 370 aa22.73■■□□□ 1.23
SMARCC2-202ENST00000347471 PLIN1O60240 522 aa22.73■■□□□ 1.23
SMARCC2-202ENST00000347471 CGNL1Q0VF96 1302 aa22.72■■□□□ 1.23
SMARCC2-202ENST00000347471 U2SURPO15042 1029 aaKnown RBP22.72■■□□□ 1.23
SMARCC2-202ENST00000347471 MTHFSP49914 203 aa22.72■■□□□ 1.23
SMARCC2-202ENST00000347471 LRPPRCP42704 1394 aaKnown RBP22.71■■□□□ 1.23
SMARCC2-202ENST00000347471 RCAN3Q9UKA8 241 aa22.71■■□□□ 1.23
SMARCC2-202ENST00000347471 LAMC1P11047 1609 aa22.71■■□□□ 1.23
SMARCC2-202ENST00000347471 FBLN1P23142 703 aa22.7■■□□□ 1.22
SMARCC2-202ENST00000347471 IQGAP1P46940 1657 aa22.7■■□□□ 1.22
SMARCC2-202ENST00000347471 RIMS2Q9UQ26 1411 aa22.69■■□□□ 1.22
SMARCC2-202ENST00000347471 CCDC136Q96JN2 1154 aa22.69■■□□□ 1.22
SMARCC2-202ENST00000347471 PPP6R1Q9UPN7 881 aa22.69■■□□□ 1.22
SMARCC2-202ENST00000347471 ASXL1Q8IXJ9 1541 aa22.69■■□□□ 1.22
SMARCC2-202ENST00000347471 PPP4R2Q9NY27 417 aa22.69■■□□□ 1.22
SMARCC2-202ENST00000347471 NCKAP5LQ9HCH0 1330 aa22.68■■□□□ 1.22
SMARCC2-202ENST00000347471 SOX12O15370 315 aa22.68■■□□□ 1.22
SMARCC2-202ENST00000347471 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
SMARCC2-202ENST00000347471 U2AF1L5P0DN76 240 aaPredicted RBP22.67■■□□□ 1.22
SMARCC2-202ENST00000347471 U2AF1Q01081 240 aaKnown RBP eCLIP22.67■■□□□ 1.22
SMARCC2-202ENST00000347471 TSHZ2Q9NRE2 1034 aa22.67■■□□□ 1.22
SMARCC2-202ENST00000347471 TERF2IPQ9NYB0 399 aa22.67■■□□□ 1.22
SMARCC2-202ENST00000347471 HDGFL2Q7Z4V5 671 aaPredicted RBP22.66■■□□□ 1.22
SMARCC2-202ENST00000347471 TNRQ92752 1358 aa22.66■■□□□ 1.22
SMARCC2-202ENST00000347471 YTHDC2Q9H6S0 1430 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms