RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 KIF13AQ9H1H9 1805 aa9.78□□□□□ -0.84
FCF1-201ENST00000341162 BLMP54132 1417 aaPredicted RBP9.78□□□□□ -0.84
FCF1-201ENST00000341162 SIGLEC1Q9BZZ2 1709 aa9.77□□□□□ -0.84
FCF1-201ENST00000341162 ADGRB1O14514 1584 aa9.77□□□□□ -0.85
FCF1-201ENST00000341162 FOXD1Q16676 465 aa9.77□□□□□ -0.85
FCF1-201ENST00000341162 NEXMIFQ5QGS0 1516 aa9.77□□□□□ -0.85
FCF1-201ENST00000341162 ARHGEF40Q8TER5 1519 aa9.77□□□□□ -0.85
FCF1-201ENST00000341162 PIK3C2GO75747 1445 aa9.77□□□□□ -0.85
FCF1-201ENST00000341162 QRICH2Q9H0J4 1663 aa9.77□□□□□ -0.85
FCF1-201ENST00000341162 ARHGEF28Q8N1W1 1705 aaKnown RBP9.76□□□□□ -0.85
FCF1-201ENST00000341162 ANKRD26Q9UPS8 1709 aa9.76□□□□□ -0.85
FCF1-201ENST00000341162 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
FCF1-201ENST00000341162 MYBBP1AQ9BQG0 1328 aaKnown RBP9.76□□□□□ -0.85
FCF1-201ENST00000341162 KNDC1Q76NI1 1749 aa9.76□□□□□ -0.85
FCF1-201ENST00000341162 SUPT16HQ9Y5B9 1047 aaKnown RBP9.76□□□□□ -0.85
FCF1-201ENST00000341162 ASXL1Q8IXJ9 1541 aa9.75□□□□□ -0.85
FCF1-201ENST00000341162 C11orf95C9JLR9 678 aaPredicted RBP9.75□□□□□ -0.85
FCF1-201ENST00000341162 NPM1P06748 294 aaKnown RBP eCLIP9.75□□□□□ -0.85
FCF1-201ENST00000341162 TMEM131LA2VDJ0 1609 aa9.74□□□□□ -0.85
FCF1-201ENST00000341162 SPATA31D1Q6ZQQ2 1576 aa9.74□□□□□ -0.85
FCF1-201ENST00000341162 DLC1Q96QB1 1528 aa9.74□□□□□ -0.85
FCF1-201ENST00000341162 YTHDC1Q96MU7 727 aaKnown RBP9.74□□□□□ -0.85
FCF1-201ENST00000341162 RNF123Q5XPI4 1314 aa9.74□□□□□ -0.85
FCF1-201ENST00000341162 NINLQ9Y2I6 1382 aa9.73□□□□□ -0.85
FCF1-201ENST00000341162 NPATQ14207 1427 aa9.73□□□□□ -0.85
FCF1-201ENST00000341162 TESK2Q96S53 571 aa9.73□□□□□ -0.85
FCF1-201ENST00000341162 NCBP3Q53F19 620 aaKnown RBP9.72□□□□□ -0.85
FCF1-201ENST00000341162 SETD1AO15047 1707 aaKnown RBP9.71□□□□□ -0.85
FCF1-201ENST00000341162 TMF1P82094 1093 aa9.71□□□□□ -0.85
FCF1-201ENST00000341162 NGEFQ8N5V2 710 aa9.71□□□□□ -0.85
FCF1-201ENST00000341162 DCAF11Q8TEB1 546 aa9.71□□□□□ -0.85
FCF1-201ENST00000341162 PDE3BQ13370 1112 aa9.71□□□□□ -0.85
FCF1-201ENST00000341162 NEFLP07196 543 aa9.7□□□□□ -0.86
FCF1-201ENST00000341162 MED14O60244 1454 aa9.7□□□□□ -0.86
FCF1-201ENST00000341162 ERVK-7P63135 1459 aa9.7□□□□□ -0.86
FCF1-201ENST00000341162 NSD2O96028 1365 aa9.69□□□□□ -0.86
FCF1-201ENST00000341162 NLRP13Q86W25 1043 aa9.68□□□□□ -0.86
FCF1-201ENST00000341162 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
FCF1-201ENST00000341162 KCNH8Q96L42 1107 aa9.68□□□□□ -0.86
FCF1-201ENST00000341162 DISP3Q9P2K9 1392 aa9.67□□□□□ -0.86
FCF1-201ENST00000341162 ST20-MTHFSA0A0A6YYL1 179 aa9.67□□□□□ -0.86
FCF1-201ENST00000341162 MYT1Q01538 1121 aa9.66□□□□□ -0.86
FCF1-201ENST00000341162 PNISRQ8TF01 805 aaKnown RBP9.66□□□□□ -0.86
FCF1-201ENST00000341162 RIMS1Q86UR5 1692 aaKnown RBP9.66□□□□□ -0.86
FCF1-201ENST00000341162 AFAP1Q8N556 730 aa9.66□□□□□ -0.86
FCF1-201ENST00000341162 MRS2Q9HD23 443 aa9.65□□□□□ -0.86
FCF1-201ENST00000341162 SLC52A1Q9NWF4 448 aa9.64□□□□□ -0.87
FCF1-201ENST00000341162 SHPRHQ149N8 1683 aa9.64□□□□□ -0.87
FCF1-201ENST00000341162 ADGRB2O60241 1585 aa9.63□□□□□ -0.87
FCF1-201ENST00000341162 MYO5BQ9ULV0 1848 aa9.63□□□□□ -0.87
FCF1-201ENST00000341162 CDC42BPGQ6DT37 1551 aa9.63□□□□□ -0.87
FCF1-201ENST00000341162 NUDCQ9Y266 331 aa9.63□□□□□ -0.87
FCF1-201ENST00000341162 HIRIP3Q9BW71 556 aaPredicted RBP9.63□□□□□ -0.87
FCF1-201ENST00000341162 KIF20BQ96Q89 1820 aa9.62□□□□□ -0.87
FCF1-201ENST00000341162 HNRNPUQ00839 825 aaKnown RBP eCLIP9.62□□□□□ -0.87
FCF1-201ENST00000341162 C14orf93Q9H972 538 aaKnown RBP9.62□□□□□ -0.87
FCF1-201ENST00000341162 KIF3BO15066 747 aa9.62□□□□□ -0.87
FCF1-201ENST00000341162 DIP2AQ14689 1571 aa9.61□□□□□ -0.87
FCF1-201ENST00000341162 CPS1P31327 1500 aa9.61□□□□□ -0.87
FCF1-201ENST00000341162 POLR3AO14802 1390 aaPredicted RBP9.6□□□□□ -0.87
FCF1-201ENST00000341162 TULP4Q9NRJ4 1543 aa9.6□□□□□ -0.87
FCF1-201ENST00000341162 LRRC7Q96NW7 1537 aa9.6□□□□□ -0.87
FCF1-201ENST00000341162 PPP4R2Q9NY27 417 aa9.59□□□□□ -0.87
FCF1-201ENST00000341162 ALKQ9UM73 1620 aa9.59□□□□□ -0.88
FCF1-201ENST00000341162 NRXN3Q9Y4C0 1643 aa9.59□□□□□ -0.88
FCF1-201ENST00000341162 USP54Q70EL1 1684 aa9.58□□□□□ -0.88
FCF1-201ENST00000341162 PTPRMP28827 1452 aa9.58□□□□□ -0.88
FCF1-201ENST00000341162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.58□□□□□ -0.88
FCF1-201ENST00000341162 TECPR2O15040 1411 aa9.58□□□□□ -0.88
FCF1-201ENST00000341162 NBPF1Q3BBV0 1214 aa9.58□□□□□ -0.88
FCF1-201ENST00000341162 PHF23Q9BUL5 403 aaPredicted RBP9.58□□□□□ -0.88
FCF1-201ENST00000341162 UBR1Q8IWV7 1749 aa9.57□□□□□ -0.88
FCF1-201ENST00000341162 ATP7BP35670 1465 aa9.57□□□□□ -0.88
FCF1-201ENST00000341162 TOPAZ1Q8N9V7 1692 aa9.57□□□□□ -0.88
FCF1-201ENST00000341162 MON2Q7Z3U7 1717 aa9.57□□□□□ -0.88
FCF1-201ENST00000341162 AKAP12Q02952 1782 aa9.57□□□□□ -0.88
FCF1-201ENST00000341162 IQSEC2Q5JU85 1478 aa9.56□□□□□ -0.88
FCF1-201ENST00000341162 VGFO15240 615 aaPredicted RBP9.56□□□□□ -0.88
FCF1-201ENST00000341162 AMER1Q5JTC6 1135 aaPredicted RBP9.56□□□□□ -0.88
FCF1-201ENST00000341162 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
FCF1-201ENST00000341162 SIRT1Q96EB6 747 aa9.56□□□□□ -0.88
FCF1-201ENST00000341162 KDM2AQ9Y2K7 1162 aa9.56□□□□□ -0.88
FCF1-201ENST00000341162 YEATS2Q9ULM3 1422 aa9.55□□□□□ -0.88
FCF1-201ENST00000341162 CENPJQ9HC77 1338 aaPredicted RBP9.55□□□□□ -0.88
FCF1-201ENST00000341162 ANKRD36BQ8N2N9 1353 aa9.55□□□□□ -0.88
FCF1-201ENST00000341162 NLRP1Q9C000 1473 aa9.55□□□□□ -0.88
FCF1-201ENST00000341162 FAM135BQ49AJ0 1406 aa9.55□□□□□ -0.88
FCF1-201ENST00000341162 A2ML1A8K2U0 1454 aa9.54□□□□□ -0.88
FCF1-201ENST00000341162 ZNF326Q5BKZ1 582 aaKnown RBP9.54□□□□□ -0.88
FCF1-201ENST00000341162 ATAD2Q6PL18 1390 aa9.54□□□□□ -0.88
FCF1-201ENST00000341162 FKBP8Q14318 412 aa9.54□□□□□ -0.88
FCF1-201ENST00000341162 CCDC184Q52MB2 194 aa9.53□□□□□ -0.88
FCF1-201ENST00000341162 ZNF521Q96K83 1311 aa9.53□□□□□ -0.88
FCF1-201ENST00000341162 ITSN1Q15811 1721 aa9.52□□□□□ -0.89
FCF1-201ENST00000341162 PANK3Q9H999 370 aa9.52□□□□□ -0.89
FCF1-201ENST00000341162 KNSTRNQ9Y448 316 aa9.52□□□□□ -0.89
FCF1-201ENST00000341162 ADGRF5Q8IZF2 1346 aa9.52□□□□□ -0.89
FCF1-201ENST00000341162 NRKQ7Z2Y5 1582 aa9.52□□□□□ -0.89
FCF1-201ENST00000341162 ZNF142P52746 1687 aaPredicted RBP9.52□□□□□ -0.89
FCF1-201ENST00000341162 SLIT1O75093 1534 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms