RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 HNRNPUQ00839 825 aaKnown RBP eCLIP9.66□□□□□ -0.86
LYSMD3-201ENST00000315948 STK26Q9P289 416 aa9.65□□□□□ -0.86
LYSMD3-201ENST00000315948 SYNMO15061 1565 aa9.65□□□□□ -0.86
LYSMD3-201ENST00000315948 PANK3Q9H999 370 aa9.65□□□□□ -0.86
LYSMD3-201ENST00000315948 CCER2I3L3R5 266 aa9.65□□□□□ -0.87
LYSMD3-201ENST00000315948 CAMSAP1Q5T5Y3 1602 aa9.64□□□□□ -0.87
LYSMD3-201ENST00000315948 LMTK2Q8IWU2 1503 aa9.64□□□□□ -0.87
LYSMD3-201ENST00000315948 PER1O15534 1290 aaPredicted RBP9.62□□□□□ -0.87
LYSMD3-201ENST00000315948 ADGRB3O60242 1522 aa9.61□□□□□ -0.87
LYSMD3-201ENST00000315948 SALL2Q9Y467 1007 aaPredicted RBP9.61□□□□□ -0.87
LYSMD3-201ENST00000315948 BCANQ96GW7 911 aa9.6□□□□□ -0.87
LYSMD3-201ENST00000315948 STAG3Q9UJ98 1225 aa9.6□□□□□ -0.87
LYSMD3-201ENST00000315948 ZMYM4Q5VZL5 1548 aa9.6□□□□□ -0.87
LYSMD3-201ENST00000315948 TMF1P82094 1093 aa9.6□□□□□ -0.87
LYSMD3-201ENST00000315948 KIF1BO60333 1816 aa9.6□□□□□ -0.87
LYSMD3-201ENST00000315948 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
LYSMD3-201ENST00000315948 MYO5BQ9ULV0 1848 aa9.59□□□□□ -0.87
LYSMD3-201ENST00000315948 SCAF11Q99590 1463 aaKnown RBP9.59□□□□□ -0.87
LYSMD3-201ENST00000315948 PIK3C2GO75747 1445 aa9.58□□□□□ -0.88
LYSMD3-201ENST00000315948 CLTCQ00610 1675 aaKnown RBP9.58□□□□□ -0.88
LYSMD3-201ENST00000315948 C14orf93Q9H972 538 aaKnown RBP9.58□□□□□ -0.88
LYSMD3-201ENST00000315948 POLR1AO95602 1720 aaPredicted RBP9.58□□□□□ -0.88
LYSMD3-201ENST00000315948 PIK3C2BO00750 1634 aa9.57□□□□□ -0.88
LYSMD3-201ENST00000315948 SLC12A5Q9H2X9 1139 aa9.57□□□□□ -0.88
LYSMD3-201ENST00000315948 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
LYSMD3-201ENST00000315948 ZMYM3Q14202 1370 aa9.57□□□□□ -0.88
LYSMD3-201ENST00000315948 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 ERVK-7P63135 1459 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 TNNT2P45379 298 aaPredicted RBP9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 CARD14Q9BXL6 1004 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 ESF1Q9H501 851 aaKnown RBP9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 CABP2Q9NPB3 220 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 IQGAP1P46940 1657 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 MYOM2P54296 1465 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 PREX1Q8TCU6 1659 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 NEXMIFQ5QGS0 1516 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 NRXN1Q9ULB1 1477 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 IFT172Q9UG01 1749 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 SLC52A1Q9NWF4 448 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 ARHGAP31Q2M1Z3 1444 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 WAPLQ7Z5K2 1190 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 CENPJQ9HC77 1338 aaPredicted RBP9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 ARHGEF40Q8TER5 1519 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 PPLO60437 1756 aa9.54□□□□□ -0.88
LYSMD3-201ENST00000315948 ADGRB1O14514 1584 aa9.54□□□□□ -0.88
LYSMD3-201ENST00000315948 VGFO15240 615 aaPredicted RBP9.54□□□□□ -0.88
LYSMD3-201ENST00000315948 PNISRQ8TF01 805 aaKnown RBP9.54□□□□□ -0.88
LYSMD3-201ENST00000315948 PRAM1Q96QH2 718 aa9.53□□□□□ -0.88
LYSMD3-201ENST00000315948 SUPT16HQ9Y5B9 1047 aaKnown RBP9.53□□□□□ -0.88
LYSMD3-201ENST00000315948 TMEM131LA2VDJ0 1609 aa9.53□□□□□ -0.88
LYSMD3-201ENST00000315948 AMER1Q5JTC6 1135 aaPredicted RBP9.53□□□□□ -0.88
LYSMD3-201ENST00000315948 ASXL1Q8IXJ9 1541 aa9.53□□□□□ -0.88
LYSMD3-201ENST00000315948 NCKAP5LQ9HCH0 1330 aa9.52□□□□□ -0.89
LYSMD3-201ENST00000315948 FKBP8Q14318 412 aa9.52□□□□□ -0.89
LYSMD3-201ENST00000315948 LAMC1P11047 1609 aa9.52□□□□□ -0.89
LYSMD3-201ENST00000315948 PLEKHH1Q9ULM0 1364 aa9.52□□□□□ -0.89
LYSMD3-201ENST00000315948 KNSTRNQ9Y448 316 aa9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 KTN1Q86UP2 1357 aaKnown RBP9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 MYBBP1AQ9BQG0 1328 aaKnown RBP9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 A2ML1A8K2U0 1454 aa9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 PARD3Q8TEW0 1356 aa9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 LTKP29376 864 aa9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 AGLP35573 1532 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 NUTM2FA1L443 756 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 EIF3AQ14152 1382 aaKnown RBP9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 RPGRIP1LQ68CZ1 1315 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 FBLN1P23142 703 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 TXNDC2Q86VQ3 553 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 SLC26A8Q96RN1 970 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 METP08581 1390 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 ZC3H13Q5T200 1668 aaKnown RBP9.49□□□□□ -0.89
LYSMD3-201ENST00000315948 PTPRMP28827 1452 aa9.49□□□□□ -0.89
LYSMD3-201ENST00000315948 SRPK2P78362 688 aaKnown RBP9.49□□□□□ -0.89
LYSMD3-201ENST00000315948 STAC3Q96MF2 364 aa9.49□□□□□ -0.89
LYSMD3-201ENST00000315948 MYOM1P52179 1685 aa9.49□□□□□ -0.89
LYSMD3-201ENST00000315948 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 RIMS2Q9UQ26 1411 aa9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 POGKQ9P215 609 aa9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 PPP2R1AP30153 589 aa9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 NEURL4Q96JN8 1562 aa9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 RALBP1Q15311 655 aa9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 NLRP13Q86W25 1043 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 TNRQ92752 1358 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 REREQ9P2R6 1566 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 CCDC146Q8IYE0 955 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 ADAMTS8Q9UP79 889 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 TULP4Q9NRJ4 1543 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.89
LYSMD3-201ENST00000315948 CDCA7LQ96GN5 454 aa9.46□□□□□ -0.89
LYSMD3-201ENST00000315948 YTHDC2Q9H6S0 1430 aaKnown RBP9.46□□□□□ -0.89
LYSMD3-201ENST00000315948 QRICH2Q9H0J4 1663 aa9.46□□□□□ -0.9
LYSMD3-201ENST00000315948 KIAA1210Q9ULL0 1709 aa9.46□□□□□ -0.9
LYSMD3-201ENST00000315948 NSD3Q9BZ95 1437 aa9.45□□□□□ -0.9
LYSMD3-201ENST00000315948 ALKQ9UM73 1620 aa9.45□□□□□ -0.9
LYSMD3-201ENST00000315948 CDK19Q9BWU1 502 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 ZFYVE9O95405 1425 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 GGNBP2Q9H3C7 697 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 CABP1Q9NZU7 370 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms