RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 HNRNPUQ00839 825 aaKnown RBP eCLIP9.66□□□□□ -0.86
LYSMD3-201ENST00000315948 STK26Q9P289 416 aa9.65□□□□□ -0.86
LYSMD3-201ENST00000315948 SYNMO15061 1565 aa9.65□□□□□ -0.86
LYSMD3-201ENST00000315948 PANK3Q9H999 370 aa9.65□□□□□ -0.86
LYSMD3-201ENST00000315948 CCER2I3L3R5 266 aa9.65□□□□□ -0.87
LYSMD3-201ENST00000315948 CAMSAP1Q5T5Y3 1602 aa9.64□□□□□ -0.87
LYSMD3-201ENST00000315948 LMTK2Q8IWU2 1503 aa9.64□□□□□ -0.87
LYSMD3-201ENST00000315948 PER1O15534 1290 aaPredicted RBP9.62□□□□□ -0.87
LYSMD3-201ENST00000315948 ADGRB3O60242 1522 aa9.61□□□□□ -0.87
LYSMD3-201ENST00000315948 SALL2Q9Y467 1007 aaPredicted RBP9.61□□□□□ -0.87
LYSMD3-201ENST00000315948 BCANQ96GW7 911 aa9.6□□□□□ -0.87
LYSMD3-201ENST00000315948 STAG3Q9UJ98 1225 aa9.6□□□□□ -0.87
LYSMD3-201ENST00000315948 ZMYM4Q5VZL5 1548 aa9.6□□□□□ -0.87
LYSMD3-201ENST00000315948 TMF1P82094 1093 aa9.6□□□□□ -0.87
LYSMD3-201ENST00000315948 KIF1BO60333 1816 aa9.6□□□□□ -0.87
LYSMD3-201ENST00000315948 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
LYSMD3-201ENST00000315948 MYO5BQ9ULV0 1848 aa9.59□□□□□ -0.87
LYSMD3-201ENST00000315948 SCAF11Q99590 1463 aaKnown RBP9.59□□□□□ -0.87
LYSMD3-201ENST00000315948 PIK3C2GO75747 1445 aa9.58□□□□□ -0.88
LYSMD3-201ENST00000315948 CLTCQ00610 1675 aaKnown RBP9.58□□□□□ -0.88
LYSMD3-201ENST00000315948 C14orf93Q9H972 538 aaKnown RBP9.58□□□□□ -0.88
LYSMD3-201ENST00000315948 POLR1AO95602 1720 aaPredicted RBP9.58□□□□□ -0.88
LYSMD3-201ENST00000315948 PIK3C2BO00750 1634 aa9.57□□□□□ -0.88
LYSMD3-201ENST00000315948 SLC12A5Q9H2X9 1139 aa9.57□□□□□ -0.88
LYSMD3-201ENST00000315948 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
LYSMD3-201ENST00000315948 ZMYM3Q14202 1370 aa9.57□□□□□ -0.88
LYSMD3-201ENST00000315948 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 ERVK-7P63135 1459 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 TNNT2P45379 298 aaPredicted RBP9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 CARD14Q9BXL6 1004 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 ESF1Q9H501 851 aaKnown RBP9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 CABP2Q9NPB3 220 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 IQGAP1P46940 1657 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 MYOM2P54296 1465 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 PREX1Q8TCU6 1659 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 NEXMIFQ5QGS0 1516 aa9.56□□□□□ -0.88
LYSMD3-201ENST00000315948 NRXN1Q9ULB1 1477 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 IFT172Q9UG01 1749 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 SLC52A1Q9NWF4 448 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 ARHGAP31Q2M1Z3 1444 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 WAPLQ7Z5K2 1190 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 CENPJQ9HC77 1338 aaPredicted RBP9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 ARHGEF40Q8TER5 1519 aa9.55□□□□□ -0.88
LYSMD3-201ENST00000315948 PPLO60437 1756 aa9.54□□□□□ -0.88
LYSMD3-201ENST00000315948 ADGRB1O14514 1584 aa9.54□□□□□ -0.88
LYSMD3-201ENST00000315948 VGFO15240 615 aaPredicted RBP9.54□□□□□ -0.88
LYSMD3-201ENST00000315948 PNISRQ8TF01 805 aaKnown RBP9.54□□□□□ -0.88
LYSMD3-201ENST00000315948 PRAM1Q96QH2 718 aa9.53□□□□□ -0.88
LYSMD3-201ENST00000315948 SUPT16HQ9Y5B9 1047 aaKnown RBP9.53□□□□□ -0.88
LYSMD3-201ENST00000315948 TMEM131LA2VDJ0 1609 aa9.53□□□□□ -0.88
LYSMD3-201ENST00000315948 AMER1Q5JTC6 1135 aaPredicted RBP9.53□□□□□ -0.88
LYSMD3-201ENST00000315948 ASXL1Q8IXJ9 1541 aa9.53□□□□□ -0.88
LYSMD3-201ENST00000315948 NCKAP5LQ9HCH0 1330 aa9.52□□□□□ -0.89
LYSMD3-201ENST00000315948 FKBP8Q14318 412 aa9.52□□□□□ -0.89
LYSMD3-201ENST00000315948 LAMC1P11047 1609 aa9.52□□□□□ -0.89
LYSMD3-201ENST00000315948 PLEKHH1Q9ULM0 1364 aa9.52□□□□□ -0.89
LYSMD3-201ENST00000315948 KNSTRNQ9Y448 316 aa9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 KTN1Q86UP2 1357 aaKnown RBP9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 MYBBP1AQ9BQG0 1328 aaKnown RBP9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 A2ML1A8K2U0 1454 aa9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 PARD3Q8TEW0 1356 aa9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 LTKP29376 864 aa9.51□□□□□ -0.89
LYSMD3-201ENST00000315948 AGLP35573 1532 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 NUTM2FA1L443 756 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 EIF3AQ14152 1382 aaKnown RBP9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 RPGRIP1LQ68CZ1 1315 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 FBLN1P23142 703 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 TXNDC2Q86VQ3 553 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 SLC26A8Q96RN1 970 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 METP08581 1390 aa9.5□□□□□ -0.89
LYSMD3-201ENST00000315948 ZC3H13Q5T200 1668 aaKnown RBP9.49□□□□□ -0.89
LYSMD3-201ENST00000315948 PTPRMP28827 1452 aa9.49□□□□□ -0.89
LYSMD3-201ENST00000315948 SRPK2P78362 688 aaKnown RBP9.49□□□□□ -0.89
LYSMD3-201ENST00000315948 STAC3Q96MF2 364 aa9.49□□□□□ -0.89
LYSMD3-201ENST00000315948 MYOM1P52179 1685 aa9.49□□□□□ -0.89
LYSMD3-201ENST00000315948 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 RIMS2Q9UQ26 1411 aa9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 POGKQ9P215 609 aa9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 PPP2R1AP30153 589 aa9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 NEURL4Q96JN8 1562 aa9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 RALBP1Q15311 655 aa9.48□□□□□ -0.89
LYSMD3-201ENST00000315948 NLRP13Q86W25 1043 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 TNRQ92752 1358 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 REREQ9P2R6 1566 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 CCDC146Q8IYE0 955 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 ADAMTS8Q9UP79 889 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 TULP4Q9NRJ4 1543 aa9.47□□□□□ -0.89
LYSMD3-201ENST00000315948 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.89
LYSMD3-201ENST00000315948 CDCA7LQ96GN5 454 aa9.46□□□□□ -0.89
LYSMD3-201ENST00000315948 YTHDC2Q9H6S0 1430 aaKnown RBP9.46□□□□□ -0.89
LYSMD3-201ENST00000315948 QRICH2Q9H0J4 1663 aa9.46□□□□□ -0.9
LYSMD3-201ENST00000315948 KIAA1210Q9ULL0 1709 aa9.46□□□□□ -0.9
LYSMD3-201ENST00000315948 NSD3Q9BZ95 1437 aa9.45□□□□□ -0.9
LYSMD3-201ENST00000315948 ALKQ9UM73 1620 aa9.45□□□□□ -0.9
LYSMD3-201ENST00000315948 CDK19Q9BWU1 502 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 ZFYVE9O95405 1425 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 GGNBP2Q9H3C7 697 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 CABP1Q9NZU7 370 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms