RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 GPRASP1Q5JY77 1395 aa14.49□□□□□ -0.09
NPC1L1-201ENST00000289547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.49□□□□□ -0.09
NPC1L1-201ENST00000289547 A2MP01023 1474 aa14.48□□□□□ -0.09
NPC1L1-201ENST00000289547 TNRQ92752 1358 aa14.48□□□□□ -0.09
NPC1L1-201ENST00000289547 NEO1Q92859 1461 aa14.47□□□□□ -0.09
NPC1L1-201ENST00000289547 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
NPC1L1-201ENST00000289547 ERBINQ96RT1 1412 aa14.47□□□□□ -0.09
NPC1L1-201ENST00000289547 SLKQ9H2G2 1235 aaPredicted RBP14.46□□□□□ -0.09
NPC1L1-201ENST00000289547 CNTLNQ9NXG0 1405 aa14.45□□□□□ -0.1
NPC1L1-201ENST00000289547 GSE1Q14687 1217 aa14.45□□□□□ -0.1
NPC1L1-201ENST00000289547 SLC26A8Q96RN1 970 aa14.45□□□□□ -0.1
NPC1L1-201ENST00000289547 ST20-MTHFSA0A0A6YYL1 179 aa14.44□□□□□ -0.1
NPC1L1-201ENST00000289547 ESCO1Q5FWF5 840 aa14.44□□□□□ -0.1
NPC1L1-201ENST00000289547 MYH16Q9H6N6 1097 aa14.44□□□□□ -0.1
NPC1L1-201ENST00000289547 SYCP2Q9BX26 1530 aa14.44□□□□□ -0.1
NPC1L1-201ENST00000289547 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
NPC1L1-201ENST00000289547 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
NPC1L1-201ENST00000289547 CGNL1Q0VF96 1302 aa14.44□□□□□ -0.1
NPC1L1-201ENST00000289547 PLCB2Q00722 1185 aa14.43□□□□□ -0.1
NPC1L1-201ENST00000289547 TPRNQ4KMQ1 711 aa14.43□□□□□ -0.1
NPC1L1-201ENST00000289547 CFAP74Q9C0B2 1584 aa14.43□□□□□ -0.1
NPC1L1-201ENST00000289547 RALBP1Q15311 655 aa14.43□□□□□ -0.1
NPC1L1-201ENST00000289547 CHMP4AQ9BY43 222 aa14.43□□□□□ -0.1
NPC1L1-201ENST00000289547 KDM5BQ9UGL1 1544 aa14.43□□□□□ -0.1
NPC1L1-201ENST00000289547 HSP90AB1P08238 724 aaKnown RBP14.43□□□□□ -0.1
NPC1L1-201ENST00000289547 DUOX2Q9NRD8 1548 aa14.43□□□□□ -0.1
NPC1L1-201ENST00000289547 TMEM132EQ6IEE7 984 aa14.42□□□□□ -0.1
NPC1L1-201ENST00000289547 NCOA1Q15788 1441 aa14.42□□□□□ -0.1
NPC1L1-201ENST00000289547 FAM135AQ9P2D6 1515 aa14.42□□□□□ -0.1
NPC1L1-201ENST00000289547 CALD1Q05682 793 aaKnown RBP14.42□□□□□ -0.1
NPC1L1-201ENST00000289547 ATP10AO60312 1499 aa14.42□□□□□ -0.1
NPC1L1-201ENST00000289547 FBXO31Q5XUX0 539 aaPredicted RBP14.41□□□□□ -0.1
NPC1L1-201ENST00000289547 RTEL1-TNFRSF6BF6WH68 1400 aa14.41□□□□□ -0.1
NPC1L1-201ENST00000289547 GOLGA6L3A6NEY3 463 aa14.41□□□□□ -0.1
NPC1L1-201ENST00000289547 USP47Q96K76 1375 aa14.41□□□□□ -0.1
NPC1L1-201ENST00000289547 PIP4K2BP78356 416 aa14.41□□□□□ -0.1
NPC1L1-201ENST00000289547 CFAP70Q5T0N1 1121 aa14.41□□□□□ -0.1
NPC1L1-201ENST00000289547 SAMD9Q5K651 1589 aa14.4□□□□□ -0.1
NPC1L1-201ENST00000289547 TRAPPC8Q9Y2L5 1435 aa14.4□□□□□ -0.1
NPC1L1-201ENST00000289547 LTV1Q96GA3 475 aaPredicted RBP14.39□□□□□ -0.11
NPC1L1-201ENST00000289547 HSCBQ8IWL3 235 aa14.39□□□□□ -0.11
NPC1L1-201ENST00000289547 U2AF1L5P0DN76 240 aaPredicted RBP14.39□□□□□ -0.11
NPC1L1-201ENST00000289547 U2AF1Q01081 240 aaKnown RBP eCLIP14.39□□□□□ -0.11
NPC1L1-201ENST00000289547 FRAT1Q92837 279 aaPredicted RBP14.38□□□□□ -0.11
NPC1L1-201ENST00000289547 PRAM1Q96QH2 718 aa14.38□□□□□ -0.11
NPC1L1-201ENST00000289547 NAIPQ13075 1403 aa14.37□□□□□ -0.11
NPC1L1-201ENST00000289547 IDI1Q13907 227 aa14.36□□□□□ -0.11
NPC1L1-201ENST00000289547 IL27Q8NEV9 243 aa14.36□□□□□ -0.11
NPC1L1-201ENST00000289547 RCAN3Q9UKA8 241 aa14.36□□□□□ -0.11
NPC1L1-201ENST00000289547 FTSJ3Q8IY81 847 aaKnown RBP14.35□□□□□ -0.11
NPC1L1-201ENST00000289547 CHAF1AQ13111 956 aaPredicted RBP14.35□□□□□ -0.11
NPC1L1-201ENST00000289547 PKNOX2Q96KN3 472 aa14.35□□□□□ -0.11
NPC1L1-201ENST00000289547 SLC4A3P48751 1232 aa14.35□□□□□ -0.11
NPC1L1-201ENST00000289547 ABCA8O94911 1581 aa14.35□□□□□ -0.11
NPC1L1-201ENST00000289547 UHRF1BP1Q6BDS2 1440 aa14.34□□□□□ -0.11
NPC1L1-201ENST00000289547 LMOD3Q0VAK6 560 aa14.34□□□□□ -0.11
NPC1L1-201ENST00000289547 ZFYVE16Q7Z3T8 1539 aa14.34□□□□□ -0.11
NPC1L1-201ENST00000289547 CHMP4BQ9H444 224 aaKnown RBP14.33□□□□□ -0.11
NPC1L1-201ENST00000289547 PDE4AP27815 886 aa14.33□□□□□ -0.12
NPC1L1-201ENST00000289547 ZNF692Q9BU19 519 aaPredicted RBP14.33□□□□□ -0.12
NPC1L1-201ENST00000289547 PANK3Q9H999 370 aa14.33□□□□□ -0.12
NPC1L1-201ENST00000289547 C1orf141Q5JVX7 400 aa14.32□□□□□ -0.12
NPC1L1-201ENST00000289547 TOM1O60784 492 aa14.32□□□□□ -0.12
NPC1L1-201ENST00000289547 NLRP6P59044 892 aa14.32□□□□□ -0.12
NPC1L1-201ENST00000289547 CABP2Q9NPB3 220 aa14.32□□□□□ -0.12
NPC1L1-201ENST00000289547 ZMYM3Q14202 1370 aa14.32□□□□□ -0.12
NPC1L1-201ENST00000289547 ABTB2Q8N961 1025 aa14.31□□□□□ -0.12
NPC1L1-201ENST00000289547 SHANK2Q9UPX8 1470 aa14.31□□□□□ -0.12
NPC1L1-201ENST00000289547 MS4A1P11836 297 aa14.31□□□□□ -0.12
NPC1L1-201ENST00000289547 AMOTL2Q9Y2J4 779 aa14.3□□□□□ -0.12
NPC1L1-201ENST00000289547 CFAP43Q8NDM7 1665 aa14.29□□□□□ -0.12
NPC1L1-201ENST00000289547 NLRP13Q86W25 1043 aa14.29□□□□□ -0.12
NPC1L1-201ENST00000289547 GBP4Q96PP9 640 aa14.29□□□□□ -0.12
NPC1L1-201ENST00000289547 NUTM2BA6NNL0 878 aaPredicted RBP14.29□□□□□ -0.12
NPC1L1-201ENST00000289547 NUTM2EB1AL46 878 aaPredicted RBP14.29□□□□□ -0.12
NPC1L1-201ENST00000289547 NUTM2AQ8IVF1 878 aaPredicted RBP14.29□□□□□ -0.12
NPC1L1-201ENST00000289547 CDK19Q9BWU1 502 aa14.29□□□□□ -0.12
NPC1L1-201ENST00000289547 TMX4Q9H1E5 349 aaPredicted RBP14.29□□□□□ -0.12
NPC1L1-201ENST00000289547 ATP7AQ04656 1500 aa14.28□□□□□ -0.12
NPC1L1-201ENST00000289547 LRPPRCP42704 1394 aaKnown RBP14.28□□□□□ -0.12
NPC1L1-201ENST00000289547 MAPKBP1O60336 1514 aa14.28□□□□□ -0.12
NPC1L1-201ENST00000289547 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
NPC1L1-201ENST00000289547 PMFBP1Q8TBY8 1022 aa14.28□□□□□ -0.12
NPC1L1-201ENST00000289547 RAPGEF4Q8WZA2 1011 aa14.27□□□□□ -0.12
NPC1L1-201ENST00000289547 MSH6P52701 1360 aa14.27□□□□□ -0.12
NPC1L1-201ENST00000289547 MAGI2Q86UL8 1455 aa14.27□□□□□ -0.12
NPC1L1-201ENST00000289547 CLASP1Q7Z460 1538 aa14.27□□□□□ -0.13
NPC1L1-201ENST00000289547 ZCCHC11Q5TAX3 1644 aaKnown RBP14.27□□□□□ -0.13
NPC1L1-201ENST00000289547 TCOF1Q13428 1488 aaKnown RBP14.27□□□□□ -0.13
NPC1L1-201ENST00000289547 CASC1Q6TDU7 716 aa14.26□□□□□ -0.13
NPC1L1-201ENST00000289547 ATAD2Q6PL18 1390 aa14.26□□□□□ -0.13
NPC1L1-201ENST00000289547 BRPF3Q9ULD4 1205 aa14.25□□□□□ -0.13
NPC1L1-201ENST00000289547 SF3B2Q13435 895 aaKnown RBP14.25□□□□□ -0.13
NPC1L1-201ENST00000289547 ZNF330Q9Y3S2 320 aaPredicted RBP14.25□□□□□ -0.13
NPC1L1-201ENST00000289547 UBAP1LF5GYI3 381 aa14.25□□□□□ -0.13
NPC1L1-201ENST00000289547 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
NPC1L1-201ENST00000289547 KIAA2012Q0VF49 1180 aa14.24□□□□□ -0.13
NPC1L1-201ENST00000289547 HSPA2P54652 639 aa14.24□□□□□ -0.13
NPC1L1-201ENST00000289547 NUTM2GQ5VZR2 741 aa14.24□□□□□ -0.13
NPC1L1-201ENST00000289547 RIMBP3CA6NJZ7 1639 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms