RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 PPP1R9BQ96SB3 815 aa30.14■■■□□ 2.41
CCM2L-201ENST00000262659 R3HCC1Q9Y3T6 440 aaKnown RBP30.14■■■□□ 2.41
CCM2L-201ENST00000262659 CAMSAP2Q08AD1 1489 aa30.13■■■□□ 2.41
CCM2L-201ENST00000262659 ARID3AQ99856 593 aa30.13■■■□□ 2.41
CCM2L-201ENST00000262659 C22orf23Q9BZE7 217 aa30.13■■■□□ 2.41
CCM2L-201ENST00000262659 MSNP26038 577 aaKnown RBP30.12■■■□□ 2.41
CCM2L-201ENST00000262659 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
CCM2L-201ENST00000262659 RTEL1-TNFRSF6BF6WH68 1400 aa30.12■■■□□ 2.41
CCM2L-201ENST00000262659 PDZRN3Q9UPQ7 1066 aa30.12■■■□□ 2.41
CCM2L-201ENST00000262659 CCDC146Q8IYE0 955 aa30.11■■■□□ 2.41
CCM2L-201ENST00000262659 ZHX1Q9UKY1 873 aaPredicted RBP30.11■■■□□ 2.41
CCM2L-201ENST00000262659 TNPO1Q92973 898 aaKnown RBP30.1■■■□□ 2.41
CCM2L-201ENST00000262659 COL17A1Q9UMD9 1497 aaPredicted RBP30.1■■■□□ 2.41
CCM2L-201ENST00000262659 PPP2R1AP30153 589 aa30.1■■■□□ 2.41
CCM2L-201ENST00000262659 CANXP27824 592 aaKnown RBP30.09■■■□□ 2.41
CCM2L-201ENST00000262659 NBPF1Q3BBV0 1214 aa30.08■■■□□ 2.41
CCM2L-201ENST00000262659 NASPP49321 788 aaPredicted RBP30.07■■■□□ 2.41
CCM2L-201ENST00000262659 MFAP1P55081 439 aaKnown RBP30.07■■■□□ 2.41
CCM2L-201ENST00000262659 DDIT3P35638 169 aa30.07■■■□□ 2.4
CCM2L-201ENST00000262659 PRDM10Q9NQV6 1147 aa30.07■■■□□ 2.4
CCM2L-201ENST00000262659 ZMYM3Q14202 1370 aa30.06■■■□□ 2.4
CCM2L-201ENST00000262659 HSCBQ8IWL3 235 aa30.06■■■□□ 2.4
CCM2L-201ENST00000262659 PCDHB15Q9Y5E8 787 aa30.06■■■□□ 2.4
CCM2L-201ENST00000262659 CLASP1Q7Z460 1538 aa30.06■■■□□ 2.4
CCM2L-201ENST00000262659 SLC24A1O60721 1099 aa30.05■■■□□ 2.4
CCM2L-201ENST00000262659 TESK2Q96S53 571 aa30.05■■■□□ 2.4
CCM2L-201ENST00000262659 PMFBP1Q8TBY8 1022 aa30.04■■■□□ 2.4
CCM2L-201ENST00000262659 DMRT2Q9Y5R5 561 aa30.04■■■□□ 2.4
CCM2L-201ENST00000262659 UQCRHLA0A096LP55 91 aa30.03■■■□□ 2.4
CCM2L-201ENST00000262659 UQCRHP07919 91 aa30.03■■■□□ 2.4
CCM2L-201ENST00000262659 APAF1O14727 1248 aa30.03■■■□□ 2.4
CCM2L-201ENST00000262659 SKOR2Q2VWA4 1001 aaPredicted RBP30.02■■■□□ 2.4
CCM2L-201ENST00000262659 E9PSI1 815 aa30.01■■■□□ 2.4
CCM2L-201ENST00000262659 NUP155O75694 1391 aa30.01■■■□□ 2.39
CCM2L-201ENST00000262659 NCOA3Q9Y6Q9 1424 aa30.01■■■□□ 2.39
CCM2L-201ENST00000262659 GBP4Q96PP9 640 aa30■■■□□ 2.39
CCM2L-201ENST00000262659 ANP32BQ92688 251 aaKnown RBP30■■■□□ 2.39
CCM2L-201ENST00000262659 CEP170Q5SW79 1584 aa29.98■■■□□ 2.39
CCM2L-201ENST00000262659 TRPM1Q7Z4N2 1603 aa29.98■■■□□ 2.39
CCM2L-201ENST00000262659 NINLQ9Y2I6 1382 aa29.98■■■□□ 2.39
CCM2L-201ENST00000262659 ADGBQ8N7X0 1667 aa29.97■■■□□ 2.39
CCM2L-201ENST00000262659 XPCQ01831 940 aaPredicted RBP29.96■■■□□ 2.39
CCM2L-201ENST00000262659 PRAG1Q86YV5 1406 aa29.96■■■□□ 2.39
CCM2L-201ENST00000262659 WDR62O43379 1518 aa29.95■■■□□ 2.39
CCM2L-201ENST00000262659 ERBINQ96RT1 1412 aa29.95■■■□□ 2.38
CCM2L-201ENST00000262659 ANKRD50Q9ULJ7 1429 aa29.95■■■□□ 2.38
CCM2L-201ENST00000262659 RAB3GAP1Q15042 981 aa29.94■■■□□ 2.38
CCM2L-201ENST00000262659 MTERF4Q7Z6M4 381 aaKnown RBP29.94■■■□□ 2.38
CCM2L-201ENST00000262659 ANKRD30AQ9BXX3 1397 aa29.93■■■□□ 2.38
CCM2L-201ENST00000262659 KDM5DQ9BY66 1539 aa29.93■■■□□ 2.38
CCM2L-201ENST00000262659 PDE4CQ08493 712 aa29.92■■■□□ 2.38
CCM2L-201ENST00000262659 TNNQ9UQP3 1299 aa29.92■■■□□ 2.38
CCM2L-201ENST00000262659 ZNF500O60304 480 aaPredicted RBP29.91■■■□□ 2.38
CCM2L-201ENST00000262659 RLBP1P12271 317 aa29.91■■■□□ 2.38
CCM2L-201ENST00000262659 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.91■■■□□ 2.38
CCM2L-201ENST00000262659 IQGAP2Q13576 1575 aa29.91■■■□□ 2.38
CCM2L-201ENST00000262659 CCDC144AA2RUR9 1427 aa29.91■■■□□ 2.38
CCM2L-201ENST00000262659 TMF1P82094 1093 aa29.91■■■□□ 2.38
CCM2L-201ENST00000262659 DMTNQ08495 405 aa29.91■■■□□ 2.38
CCM2L-201ENST00000262659 SMC5Q8IY18 1101 aa29.91■■■□□ 2.38
CCM2L-201ENST00000262659 KNSTRNQ9Y448 316 aa29.91■■■□□ 2.38
CCM2L-201ENST00000262659 ADGRL2O95490 1459 aa29.9■■■□□ 2.38
CCM2L-201ENST00000262659 DYNC1I1O14576 645 aa29.9■■■□□ 2.38
CCM2L-201ENST00000262659 NOL7Q9UMY1 257 aaKnown RBP29.9■■■□□ 2.38
CCM2L-201ENST00000262659 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
CCM2L-201ENST00000262659 RWDD1Q9H446 243 aaPredicted RBP29.89■■■□□ 2.38
CCM2L-201ENST00000262659 CIZ1Q9ULV3 898 aaPredicted RBP29.89■■■□□ 2.38
CCM2L-201ENST00000262659 UTP14CQ5TAP6 766 aaKnown RBP29.89■■■□□ 2.38
CCM2L-201ENST00000262659 MAGI2Q86UL8 1455 aa29.88■■■□□ 2.37
CCM2L-201ENST00000262659 PTMSP20962 102 aa29.87■■■□□ 2.37
CCM2L-201ENST00000262659 ZNF777Q9ULD5 760 aaPredicted RBP29.87■■■□□ 2.37
CCM2L-201ENST00000262659 GPRASP1Q5JY77 1395 aa29.87■■■□□ 2.37
CCM2L-201ENST00000262659 AMER1Q5JTC6 1135 aaPredicted RBP29.87■■■□□ 2.37
CCM2L-201ENST00000262659 CFDP1Q9UEE9 299 aaPredicted RBP29.87■■■□□ 2.37
CCM2L-201ENST00000262659 PDS5BQ9NTI5 1447 aa29.86■■■□□ 2.37
CCM2L-201ENST00000262659 HS1BP3Q53T59 392 aa29.86■■■□□ 2.37
CCM2L-201ENST00000262659 ZSCAN20P17040 1043 aaPredicted RBP29.85■■■□□ 2.37
CCM2L-201ENST00000262659 RGL3Q3MIN7 710 aa29.85■■■□□ 2.37
CCM2L-201ENST00000262659 HSP90AB1P08238 724 aaKnown RBP29.85■■■□□ 2.37
CCM2L-201ENST00000262659 SNX21Q969T3 373 aa29.84■■■□□ 2.37
CCM2L-201ENST00000262659 FOXD4L1Q9NU39 408 aa29.84■■■□□ 2.37
CCM2L-201ENST00000262659 SCAPERQ9BY12 1400 aa29.83■■■□□ 2.37
CCM2L-201ENST00000262659 CCDC94Q9BW85 323 aaPredicted RBP29.83■■■□□ 2.37
CCM2L-201ENST00000262659 PRDM15P57071 1507 aaPredicted RBP29.82■■■□□ 2.36
CCM2L-201ENST00000262659 ABCC2Q92887 1545 aa29.81■■■□□ 2.36
CCM2L-201ENST00000262659 PBRM1Q86U86 1689 aa29.81■■■□□ 2.36
CCM2L-201ENST00000262659 IBTKQ9P2D0 1353 aaPredicted RBP29.81■■■□□ 2.36
CCM2L-201ENST00000262659 DDX49Q9Y6V7 483 aaKnown RBP29.81■■■□□ 2.36
CCM2L-201ENST00000262659 BBXQ8WY36 941 aaPredicted RBP29.8■■■□□ 2.36
CCM2L-201ENST00000262659 PLXNC1O60486 1568 aa29.8■■■□□ 2.36
CCM2L-201ENST00000262659 RARSP54136 660 aaKnown RBP29.79■■■□□ 2.36
CCM2L-201ENST00000262659 KLHL40Q2TBA0 621 aa29.79■■■□□ 2.36
CCM2L-201ENST00000262659 DNAJC5BQ9UF47 199 aa29.79■■■□□ 2.36
CCM2L-201ENST00000262659 WDR7Q9Y4E6 1490 aa29.79■■■□□ 2.36
CCM2L-201ENST00000262659 EIF4G3O43432 1585 aaKnown RBP29.79■■■□□ 2.36
CCM2L-201ENST00000262659 PIK3C2GO75747 1445 aa29.79■■■□□ 2.36
CCM2L-201ENST00000262659 SSFA2P28290 1259 aa29.78■■■□□ 2.36
CCM2L-201ENST00000262659 CROCC2H7BZ55 1655 aa29.77■■■□□ 2.36
CCM2L-201ENST00000262659 RBM25P49756 843 aaKnown RBP29.77■■■□□ 2.36
CCM2L-201ENST00000262659 BCL2L13Q9BXK5 485 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms