RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 ABCB7O75027 752 aa12.76□□□□□ -0.37
TMEM258-201ENST00000257262 SLC52A1Q9NWF4 448 aa12.76□□□□□ -0.37
TMEM258-201ENST00000257262 KDM5AP29375 1690 aaKnown RBP12.75□□□□□ -0.37
TMEM258-201ENST00000257262 ANKLE2Q86XL3 938 aa12.75□□□□□ -0.37
TMEM258-201ENST00000257262 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
TMEM258-201ENST00000257262 SETD5Q9C0A6 1442 aa12.74□□□□□ -0.37
TMEM258-201ENST00000257262 DISP3Q9P2K9 1392 aa12.74□□□□□ -0.37
TMEM258-201ENST00000257262 SPHKAPQ2M3C7 1700 aa12.74□□□□□ -0.37
TMEM258-201ENST00000257262 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
TMEM258-201ENST00000257262 ILDR2Q71H61 639 aa12.73□□□□□ -0.37
TMEM258-201ENST00000257262 MYO5BQ9ULV0 1848 aa12.72□□□□□ -0.37
TMEM258-201ENST00000257262 SLIT1O75093 1534 aa12.72□□□□□ -0.37
TMEM258-201ENST00000257262 TMEM131LA2VDJ0 1609 aa12.71□□□□□ -0.37
TMEM258-201ENST00000257262 LTKP29376 864 aa12.71□□□□□ -0.37
TMEM258-201ENST00000257262 ADGRB3O60242 1522 aa12.71□□□□□ -0.38
TMEM258-201ENST00000257262 MED14O60244 1454 aa12.71□□□□□ -0.38
TMEM258-201ENST00000257262 ARHGAP23Q9P227 1491 aa12.71□□□□□ -0.38
TMEM258-201ENST00000257262 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
TMEM258-201ENST00000257262 TXNDC2Q86VQ3 553 aa12.7□□□□□ -0.38
TMEM258-201ENST00000257262 RAB3GAP2Q9H2M9 1393 aa12.69□□□□□ -0.38
TMEM258-201ENST00000257262 TMEM2Q9UHN6 1383 aa12.69□□□□□ -0.38
TMEM258-201ENST00000257262 SOCS7O14512 581 aa12.69□□□□□ -0.38
TMEM258-201ENST00000257262 MPHOSPH9Q99550 1183 aa12.69□□□□□ -0.38
TMEM258-201ENST00000257262 EID1Q9Y6B2 187 aa12.69□□□□□ -0.38
TMEM258-201ENST00000257262 IQGAP1P46940 1657 aa12.69□□□□□ -0.38
TMEM258-201ENST00000257262 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
TMEM258-201ENST00000257262 ACIN1Q9UKV3 1341 aaKnown RBP12.67□□□□□ -0.38
TMEM258-201ENST00000257262 SCAF11Q99590 1463 aaKnown RBP12.67□□□□□ -0.38
TMEM258-201ENST00000257262 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
TMEM258-201ENST00000257262 TRPM2O94759 1503 aa12.67□□□□□ -0.38
TMEM258-201ENST00000257262 CLTCL1P53675 1640 aa12.66□□□□□ -0.38
TMEM258-201ENST00000257262 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
TMEM258-201ENST00000257262 ZNF335Q9H4Z2 1342 aaPredicted RBP12.66□□□□□ -0.38
TMEM258-201ENST00000257262 CERKQ8TCT0 537 aa12.66□□□□□ -0.38
TMEM258-201ENST00000257262 KIF1BO60333 1816 aa12.65□□□□□ -0.38
TMEM258-201ENST00000257262 RIMS2Q9UQ26 1411 aa12.64□□□□□ -0.39
TMEM258-201ENST00000257262 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
TMEM258-201ENST00000257262 ZFYVE9O95405 1425 aa12.63□□□□□ -0.39
TMEM258-201ENST00000257262 HRCP23327 699 aa12.63□□□□□ -0.39
TMEM258-201ENST00000257262 NUTM2DQ5VT03 806 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-201ENST00000257262 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-201ENST00000257262 POLA2Q14181 598 aa12.62□□□□□ -0.39
TMEM258-201ENST00000257262 ZNF326Q5BKZ1 582 aaKnown RBP12.62□□□□□ -0.39
TMEM258-201ENST00000257262 PPP1R15AO75807 674 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-201ENST00000257262 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.61□□□□□ -0.39
TMEM258-201ENST00000257262 BCANQ96GW7 911 aa12.61□□□□□ -0.39
TMEM258-201ENST00000257262 SLC26A8Q96RN1 970 aa12.61□□□□□ -0.39
TMEM258-201ENST00000257262 STRCP1A6NGW2 1772 aa12.61□□□□□ -0.39
TMEM258-201ENST00000257262 PLEKHG1Q9ULL1 1385 aa12.58□□□□□ -0.4
TMEM258-201ENST00000257262 CCDC144AA2RUR9 1427 aa12.57□□□□□ -0.4
TMEM258-201ENST00000257262 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
TMEM258-201ENST00000257262 CPS1P31327 1500 aa12.57□□□□□ -0.4
TMEM258-201ENST00000257262 NEXMIFQ5QGS0 1516 aa12.57□□□□□ -0.4
TMEM258-201ENST00000257262 IQSEC2Q5JU85 1478 aa12.55□□□□□ -0.4
TMEM258-201ENST00000257262 TBX22Q9Y458 520 aa12.55□□□□□ -0.4
TMEM258-201ENST00000257262 PPLO60437 1756 aa12.54□□□□□ -0.4
TMEM258-201ENST00000257262 CHD2O14647 1828 aaKnown RBP12.54□□□□□ -0.4
TMEM258-201ENST00000257262 RGL3Q3MIN7 710 aa12.54□□□□□ -0.4
TMEM258-201ENST00000257262 RPGRIP1LQ68CZ1 1315 aa12.54□□□□□ -0.4
TMEM258-201ENST00000257262 ADAMTS13Q76LX8 1427 aa12.54□□□□□ -0.4
TMEM258-201ENST00000257262 NRXN3Q9Y4C0 1643 aa12.53□□□□□ -0.4
TMEM258-201ENST00000257262 KCNA6P17658 529 aa12.53□□□□□ -0.4
TMEM258-201ENST00000257262 ANKRD30BQ9BXX2 1392 aa12.53□□□□□ -0.4
TMEM258-201ENST00000257262 LRRC7Q96NW7 1537 aa12.52□□□□□ -0.4
TMEM258-201ENST00000257262 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
TMEM258-201ENST00000257262 XIRP1Q702N8 1843 aaKnown RBP12.52□□□□□ -0.41
TMEM258-201ENST00000257262 SPATA31E1Q6ZUB1 1445 aa12.52□□□□□ -0.41
TMEM258-201ENST00000257262 DIP2AQ14689 1571 aa12.52□□□□□ -0.41
TMEM258-201ENST00000257262 IFT172Q9UG01 1749 aa12.51□□□□□ -0.41
TMEM258-201ENST00000257262 SETBP1Q9Y6X0 1596 aa12.51□□□□□ -0.41
TMEM258-201ENST00000257262 NWD1Q149M9 1564 aa12.5□□□□□ -0.41
TMEM258-201ENST00000257262 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
TMEM258-201ENST00000257262 PROSER2Q86WR7 435 aaPredicted RBP12.49□□□□□ -0.41
TMEM258-201ENST00000257262 RBM33Q96EV2 1170 aaKnown RBP12.49□□□□□ -0.41
TMEM258-201ENST00000257262 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
TMEM258-201ENST00000257262 PIK3R4Q99570 1358 aa12.48□□□□□ -0.41
TMEM258-201ENST00000257262 PTPRUQ92729 1446 aa12.47□□□□□ -0.41
TMEM258-201ENST00000257262 METP08581 1390 aa12.47□□□□□ -0.41
TMEM258-201ENST00000257262 ADGRF5Q8IZF2 1346 aa12.47□□□□□ -0.41
TMEM258-201ENST00000257262 AMOTL2Q9Y2J4 779 aa12.47□□□□□ -0.41
TMEM258-201ENST00000257262 TMEM94Q12767 1356 aa12.46□□□□□ -0.41
TMEM258-201ENST00000257262 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.41
TMEM258-201ENST00000257262 TOM1O60784 492 aa12.46□□□□□ -0.41
TMEM258-201ENST00000257262 ALKQ9UM73 1620 aa12.46□□□□□ -0.41
TMEM258-201ENST00000257262 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.42
TMEM258-201ENST00000257262 XRN1Q8IZH2 1706 aaKnown RBP12.43□□□□□ -0.42
TMEM258-201ENST00000257262 PIP4K2BP78356 416 aa12.43□□□□□ -0.42
TMEM258-201ENST00000257262 DCAF11Q8TEB1 546 aa12.43□□□□□ -0.42
TMEM258-201ENST00000257262 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
TMEM258-201ENST00000257262 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
TMEM258-201ENST00000257262 MYOM2P54296 1465 aa12.41□□□□□ -0.42
TMEM258-201ENST00000257262 PIK3C2GO75747 1445 aa12.41□□□□□ -0.42
TMEM258-201ENST00000257262 DHX57Q6P158 1386 aaKnown RBP12.41□□□□□ -0.42
TMEM258-201ENST00000257262 NCOA3Q9Y6Q9 1424 aa12.4□□□□□ -0.42
TMEM258-201ENST00000257262 SIN3AQ96ST3 1273 aa12.4□□□□□ -0.42
TMEM258-201ENST00000257262 NRXN1Q9ULB1 1477 aa12.4□□□□□ -0.43
TMEM258-201ENST00000257262 CFAP70Q5T0N1 1121 aa12.39□□□□□ -0.43
TMEM258-201ENST00000257262 TMEM132EQ6IEE7 984 aa12.39□□□□□ -0.43
TMEM258-201ENST00000257262 C14orf37Q86TY3 774 aa12.39□□□□□ -0.43
TMEM258-201ENST00000257262 C14orf93Q9H972 538 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms