RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 CHGAP10645 457 aaKnown RBP26.59■■□□□ 1.85
HOXC13-201ENST00000243056 ZMYND15Q9H091 742 aa26.58■■□□□ 1.85
HOXC13-201ENST00000243056 PODXL2Q9NZ53 605 aa26.58■■□□□ 1.85
HOXC13-201ENST00000243056 PTPRTO14522 1441 aa26.57■■□□□ 1.84
HOXC13-201ENST00000243056 ARHGEF40Q8TER5 1519 aa26.56■■□□□ 1.84
HOXC13-201ENST00000243056 SENP3Q9H4L4 574 aaPredicted RBP26.56■■□□□ 1.84
HOXC13-201ENST00000243056 PLPPR3Q6T4P5 718 aa26.55■■□□□ 1.84
HOXC13-201ENST00000243056 CLTCL1P53675 1640 aa26.53■■□□□ 1.84
HOXC13-201ENST00000243056 SPHKAPQ2M3C7 1700 aa26.53■■□□□ 1.84
HOXC13-201ENST00000243056 BCORL1Q5H9F3 1711 aa26.53■■□□□ 1.84
HOXC13-201ENST00000243056 GSE1Q14687 1217 aa26.53■■□□□ 1.84
HOXC13-201ENST00000243056 LMTK2Q8IWU2 1503 aa26.52■■□□□ 1.84
HOXC13-201ENST00000243056 TRPM2O94759 1503 aa26.51■■□□□ 1.83
HOXC13-201ENST00000243056 VSIG10Q8N0Z9 540 aa26.5■■□□□ 1.83
HOXC13-201ENST00000243056 NPM2Q86SE8 214 aaKnown RBP26.49■■□□□ 1.83
HOXC13-201ENST00000243056 NUTM2DQ5VT03 806 aaPredicted RBP26.49■■□□□ 1.83
HOXC13-201ENST00000243056 CAMSAP1Q5T5Y3 1602 aa26.48■■□□□ 1.83
HOXC13-201ENST00000243056 HSPA5P11021 654 aaKnown RBP26.48■■□□□ 1.83
HOXC13-201ENST00000243056 GLIPR1L2Q4G1C9 344 aa26.48■■□□□ 1.83
HOXC13-201ENST00000243056 SPATA31E1Q6ZUB1 1445 aa26.48■■□□□ 1.83
HOXC13-201ENST00000243056 NBPF1Q3BBV0 1214 aa26.47■■□□□ 1.83
HOXC13-201ENST00000243056 PPM1GO15355 546 aaPredicted RBP26.46■■□□□ 1.83
HOXC13-201ENST00000243056 IDI1Q13907 227 aa26.45■■□□□ 1.83
HOXC13-201ENST00000243056 AGLP35573 1532 aa26.45■■□□□ 1.82
HOXC13-201ENST00000243056 CEBPAP49715 358 aaPredicted RBP26.44■■□□□ 1.82
HOXC13-201ENST00000243056 ESF1Q9H501 851 aaKnown RBP26.44■■□□□ 1.82
HOXC13-201ENST00000243056 REREQ9P2R6 1566 aa26.44■■□□□ 1.82
HOXC13-201ENST00000243056 FAM43AQ8N2R8 423 aa26.43■■□□□ 1.82
HOXC13-201ENST00000243056 CCDC184Q52MB2 194 aa26.43■■□□□ 1.82
HOXC13-201ENST00000243056 FRAT1Q92837 279 aaPredicted RBP26.41■■□□□ 1.82
HOXC13-201ENST00000243056 CLTCQ00610 1675 aaKnown RBP26.41■■□□□ 1.82
HOXC13-201ENST00000243056 SLC24A1O60721 1099 aa26.4■■□□□ 1.82
HOXC13-201ENST00000243056 EIF4G2P78344 907 aaKnown RBP eCLIP26.39■■□□□ 1.81
HOXC13-201ENST00000243056 NOS1P29475 1434 aa26.39■■□□□ 1.81
HOXC13-201ENST00000243056 SYNMO15061 1565 aa26.38■■□□□ 1.81
HOXC13-201ENST00000243056 CARD11Q9BXL7 1154 aa26.38■■□□□ 1.81
HOXC13-201ENST00000243056 ZBED9Q6R2W3 1325 aa26.37■■□□□ 1.81
HOXC13-201ENST00000243056 PRAG1Q86YV5 1406 aa26.37■■□□□ 1.81
HOXC13-201ENST00000243056 ADGRF5Q8IZF2 1346 aa26.36■■□□□ 1.81
HOXC13-201ENST00000243056 ZMYM3Q14202 1370 aa26.36■■□□□ 1.81
HOXC13-201ENST00000243056 ARHGAP31Q2M1Z3 1444 aa26.35■■□□□ 1.81
HOXC13-201ENST00000243056 UHRF1BP1Q6BDS2 1440 aa26.35■■□□□ 1.81
HOXC13-201ENST00000243056 CNTLNQ9NXG0 1405 aa26.35■■□□□ 1.81
HOXC13-201ENST00000243056 MROH2AA6NES4 1674 aa26.34■■□□□ 1.81
HOXC13-201ENST00000243056 ROCK2O75116 1388 aaKnown RBP26.33■■□□□ 1.81
HOXC13-201ENST00000243056 ZC3H13Q5T200 1668 aaKnown RBP26.32■■□□□ 1.8
HOXC13-201ENST00000243056 PPP6R1Q9UPN7 881 aa26.3■■□□□ 1.8
HOXC13-201ENST00000243056 PREX1Q8TCU6 1659 aa26.29■■□□□ 1.8
HOXC13-201ENST00000243056 USP47Q96K76 1375 aa26.29■■□□□ 1.8
HOXC13-201ENST00000243056 ERVK-7P63135 1459 aa26.29■■□□□ 1.8
HOXC13-201ENST00000243056 CFAP70Q5T0N1 1121 aa26.28■■□□□ 1.8
HOXC13-201ENST00000243056 NFKBIBQ15653 356 aa26.28■■□□□ 1.8
HOXC13-201ENST00000243056 FAM9BQ8IZU0 186 aa26.28■■□□□ 1.8
HOXC13-201ENST00000243056 KIF1BO60333 1816 aa26.27■■□□□ 1.8
HOXC13-201ENST00000243056 RALGAPBQ86X10 1494 aa26.26■■□□□ 1.8
HOXC13-201ENST00000243056 ST20-MTHFSA0A0A6YYL1 179 aa26.26■■□□□ 1.79
HOXC13-201ENST00000243056 STAG3Q9UJ98 1225 aa26.26■■□□□ 1.79
HOXC13-201ENST00000243056 POLR3GLQ9BT43 218 aa26.25■■□□□ 1.79
HOXC13-201ENST00000243056 SLC52A1Q9NWF4 448 aa26.25■■□□□ 1.79
HOXC13-201ENST00000243056 DAXXQ9UER7 740 aaPredicted RBP26.25■■□□□ 1.79
HOXC13-201ENST00000243056 ADGRB3O60242 1522 aa26.23■■□□□ 1.79
HOXC13-201ENST00000243056 RNF123Q5XPI4 1314 aa26.22■■□□□ 1.79
HOXC13-201ENST00000243056 PDE4AP27815 886 aa26.21■■□□□ 1.79
HOXC13-201ENST00000243056 PIK3C2BO00750 1634 aa26.21■■□□□ 1.79
HOXC13-201ENST00000243056 TRPM1Q7Z4N2 1603 aa26.2■■□□□ 1.79
HOXC13-201ENST00000243056 TMEM132EQ6IEE7 984 aa26.19■■□□□ 1.78
HOXC13-201ENST00000243056 SMG6Q86US8 1419 aaKnown RBP26.19■■□□□ 1.78
HOXC13-201ENST00000243056 MYO5BQ9ULV0 1848 aa26.19■■□□□ 1.78
HOXC13-201ENST00000243056 MADDQ8WXG6 1647 aa26.18■■□□□ 1.78
HOXC13-201ENST00000243056 BACH2Q9BYV9 841 aa26.16■■□□□ 1.78
HOXC13-201ENST00000243056 RRAGDQ9NQL2 400 aaPredicted RBP26.15■■□□□ 1.78
HOXC13-201ENST00000243056 SPATA31D1Q6ZQQ2 1576 aa26.14■■□□□ 1.77
HOXC13-201ENST00000243056 MRS2Q9HD23 443 aa26.13■■□□□ 1.77
HOXC13-201ENST00000243056 TCERG1O14776 1098 aaKnown RBP26.13■■□□□ 1.77
HOXC13-201ENST00000243056 TNRQ92752 1358 aa26.12■■□□□ 1.77
HOXC13-201ENST00000243056 KIF7Q2M1P5 1343 aa26.12■■□□□ 1.77
HOXC13-201ENST00000243056 TMEM131LA2VDJ0 1609 aa26.12■■□□□ 1.77
HOXC13-201ENST00000243056 GPRASP1Q5JY77 1395 aa26.09■■□□□ 1.77
HOXC13-201ENST00000243056 NEXMIFQ5QGS0 1516 aa26.09■■□□□ 1.77
HOXC13-201ENST00000243056 HSP90AA2PQ14568 343 aaPredicted RBP26.09■■□□□ 1.77
HOXC13-201ENST00000243056 IFT172Q9UG01 1749 aa26.09■■□□□ 1.77
HOXC13-201ENST00000243056 VGFO15240 615 aaPredicted RBP26.08■■□□□ 1.77
HOXC13-201ENST00000243056 CNGB1Q14028 1251 aaPredicted RBP26.08■■□□□ 1.77
HOXC13-201ENST00000243056 NUDCQ9Y266 331 aa26.08■■□□□ 1.77
HOXC13-201ENST00000243056 PPLO60437 1756 aa26.08■■□□□ 1.77
HOXC13-201ENST00000243056 FER1L4A9Z1Z3 1794 aa26.07■■□□□ 1.76
HOXC13-201ENST00000243056 MYOM2P54296 1465 aa26.07■■□□□ 1.76
HOXC13-201ENST00000243056 CCDC7Q96M83 1385 aa26.07■■□□□ 1.76
HOXC13-201ENST00000243056 RPGRIP1LQ68CZ1 1315 aa26.07■■□□□ 1.76
HOXC13-201ENST00000243056 PRKRIP1Q9H875 184 aaPredicted RBP26.07■■□□□ 1.76
HOXC13-201ENST00000243056 A2ML1A8K2U0 1454 aa26.06■■□□□ 1.76
HOXC13-201ENST00000243056 TRAK1Q9UPV9 953 aa26.06■■□□□ 1.76
HOXC13-201ENST00000243056 NEURL4Q96JN8 1562 aa26.06■■□□□ 1.76
HOXC13-201ENST00000243056 PIK3C2GO75747 1445 aa26.05■■□□□ 1.76
HOXC13-201ENST00000243056 STAC3Q96MF2 364 aa26.05■■□□□ 1.76
HOXC13-201ENST00000243056 C3P01024 1663 aa26.04■■□□□ 1.76
HOXC13-201ENST00000243056 RRP9O43818 475 aaKnown RBP26.04■■□□□ 1.76
HOXC13-201ENST00000243056 C14orf93Q9H972 538 aaKnown RBP26.04■■□□□ 1.76
HOXC13-201ENST00000243056 SLC4A3P48751 1232 aa26.03■■□□□ 1.76
HOXC13-201ENST00000243056 DDRGK1Q96HY6 314 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms