RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
MCM3-201ENST00000229854 A2MP01023 1474 aa13.4□□□□□ -0.26
MCM3-201ENST00000229854 L1TD1Q5T7N2 865 aaKnown RBP13.4□□□□□ -0.26
MCM3-201ENST00000229854 KTN1Q86UP2 1357 aaKnown RBP13.4□□□□□ -0.26
MCM3-201ENST00000229854 HSP90AA1P07900 732 aaKnown RBP13.4□□□□□ -0.26
MCM3-201ENST00000229854 CENPQQ7L2Z9 268 aaPredicted RBP13.4□□□□□ -0.26
MCM3-201ENST00000229854 SLKQ9H2G2 1235 aaPredicted RBP13.4□□□□□ -0.26
MCM3-201ENST00000229854 PLCH2O75038 1416 aa13.39□□□□□ -0.27
MCM3-201ENST00000229854 CEP152O94986 1710 aa13.39□□□□□ -0.27
MCM3-201ENST00000229854 CARD11Q9BXL7 1154 aa13.38□□□□□ -0.27
MCM3-201ENST00000229854 ABCA9Q8IUA7 1624 aa13.37□□□□□ -0.27
MCM3-201ENST00000229854 SPHKAPQ2M3C7 1700 aa13.37□□□□□ -0.27
MCM3-201ENST00000229854 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
MCM3-201ENST00000229854 ZFYVE16Q7Z3T8 1539 aa13.37□□□□□ -0.27
MCM3-201ENST00000229854 IQGAP1P46940 1657 aa13.36□□□□□ -0.27
MCM3-201ENST00000229854 KDM2BQ8NHM5 1336 aa13.36□□□□□ -0.27
MCM3-201ENST00000229854 INO80Q9ULG1 1556 aaPredicted RBP13.36□□□□□ -0.27
MCM3-201ENST00000229854 CCDC144AA2RUR9 1427 aa13.36□□□□□ -0.27
MCM3-201ENST00000229854 MADDQ8WXG6 1647 aa13.35□□□□□ -0.27
MCM3-201ENST00000229854 VWDEQ8N2E2 1590 aa13.35□□□□□ -0.27
MCM3-201ENST00000229854 COL17A1Q9UMD9 1497 aaPredicted RBP13.35□□□□□ -0.27
MCM3-201ENST00000229854 NEURL4Q96JN8 1562 aa13.35□□□□□ -0.27
MCM3-201ENST00000229854 ST20-MTHFSA0A0A6YYL1 179 aa13.34□□□□□ -0.27
MCM3-201ENST00000229854 KDM2AQ9Y2K7 1162 aa13.34□□□□□ -0.27
MCM3-201ENST00000229854 GZF1Q9H116 711 aaPredicted RBP13.33□□□□□ -0.27
MCM3-201ENST00000229854 TRPM2O94759 1503 aa13.33□□□□□ -0.28
MCM3-201ENST00000229854 RRP9O43818 475 aaKnown RBP13.33□□□□□ -0.28
MCM3-201ENST00000229854 RTEL1-TNFRSF6BF6WH68 1400 aa13.32□□□□□ -0.28
MCM3-201ENST00000229854 TET3O43151 1660 aa13.32□□□□□ -0.28
MCM3-201ENST00000229854 BECN1Q14457 450 aa13.32□□□□□ -0.28
MCM3-201ENST00000229854 CC2D1BQ5T0F9 858 aaKnown RBP13.32□□□□□ -0.28
MCM3-201ENST00000229854 GOLGA6L3A6NEY3 463 aa13.31□□□□□ -0.28
MCM3-201ENST00000229854 ZMYM4Q5VZL5 1548 aa13.31□□□□□ -0.28
MCM3-201ENST00000229854 KIAA1210Q9ULL0 1709 aa13.31□□□□□ -0.28
MCM3-201ENST00000229854 XRCC6P12956 609 aaKnown RBP eCLIP13.3□□□□□ -0.28
MCM3-201ENST00000229854 PANK2Q9BZ23 570 aa13.3□□□□□ -0.28
MCM3-201ENST00000229854 TRAPPC8Q9Y2L5 1435 aa13.3□□□□□ -0.28
MCM3-201ENST00000229854 PARD3Q8TEW0 1356 aa13.3□□□□□ -0.28
MCM3-201ENST00000229854 MROH1Q8NDA8 1641 aa13.29□□□□□ -0.28
MCM3-201ENST00000229854 CLTCL1P53675 1640 aa13.29□□□□□ -0.28
MCM3-201ENST00000229854 IFT172Q9UG01 1749 aa13.29□□□□□ -0.28
MCM3-201ENST00000229854 PTPRTO14522 1441 aa13.29□□□□□ -0.28
MCM3-201ENST00000229854 CLCN1P35523 988 aa13.28□□□□□ -0.28
MCM3-201ENST00000229854 SPRYD3Q8NCJ5 442 aa13.28□□□□□ -0.28
MCM3-201ENST00000229854 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.28□□□□□ -0.28
MCM3-201ENST00000229854 MYOM1P52179 1685 aa13.27□□□□□ -0.29
MCM3-201ENST00000229854 WDR7Q9Y4E6 1490 aa13.26□□□□□ -0.29
MCM3-201ENST00000229854 INSRP06213 1382 aa13.26□□□□□ -0.29
MCM3-201ENST00000229854 SEC24BO95487 1268 aa13.26□□□□□ -0.29
MCM3-201ENST00000229854 ATP7AQ04656 1500 aa13.25□□□□□ -0.29
MCM3-201ENST00000229854 TESK2Q96S53 571 aa13.25□□□□□ -0.29
MCM3-201ENST00000229854 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
MCM3-201ENST00000229854 USP19O94966 1318 aa13.23□□□□□ -0.29
MCM3-201ENST00000229854 DISP3Q9P2K9 1392 aa13.23□□□□□ -0.29
MCM3-201ENST00000229854 SCAPERQ9BY12 1400 aa13.23□□□□□ -0.29
MCM3-201ENST00000229854 SYNMO15061 1565 aa13.22□□□□□ -0.29
MCM3-201ENST00000229854 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
MCM3-201ENST00000229854 NBPF1Q3BBV0 1214 aa13.21□□□□□ -0.29
MCM3-201ENST00000229854 EFCAB2Q5VUJ9 269 aa13.21□□□□□ -0.29
MCM3-201ENST00000229854 PODXL2Q9NZ53 605 aa13.21□□□□□ -0.29
MCM3-201ENST00000229854 UPF2Q9HAU5 1272 aaKnown RBP13.21□□□□□ -0.29
MCM3-201ENST00000229854 KIDINS220Q9ULH0 1771 aa13.21□□□□□ -0.29
MCM3-201ENST00000229854 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.3
MCM3-201ENST00000229854 BLMP54132 1417 aaPredicted RBP13.2□□□□□ -0.3
MCM3-201ENST00000229854 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
MCM3-201ENST00000229854 MYO3AQ8NEV4 1616 aa13.2□□□□□ -0.3
MCM3-201ENST00000229854 IGHDP01880 384 aa13.2□□□□□ -0.3
MCM3-201ENST00000229854 FSD2A1L4K1 749 aa13.19□□□□□ -0.3
MCM3-201ENST00000229854 GOLGA2Q08379 1002 aa13.19□□□□□ -0.3
MCM3-201ENST00000229854 ANTXR1Q9H6X2 564 aa13.19□□□□□ -0.3
MCM3-201ENST00000229854 ESPNB1AK53 854 aa13.19□□□□□ -0.3
MCM3-201ENST00000229854 MCM4P33991 863 aa13.19□□□□□ -0.3
MCM3-201ENST00000229854 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■□□ 16.7
MCM3-201ENST00000229854 TRIM44Q96DX7 344 aaPredicted RBP13.19□□□□□ -0.3
MCM3-201ENST00000229854 LMTK2Q8IWU2 1503 aa13.19□□□□□ -0.3
MCM3-201ENST00000229854 EFCAB6Q5THR3 1501 aa13.18□□□□□ -0.3
MCM3-201ENST00000229854 MROH2AA6NES4 1674 aa13.18□□□□□ -0.3
MCM3-201ENST00000229854 MAP3K4Q9Y6R4 1608 aa13.18□□□□□ -0.3
MCM3-201ENST00000229854 KIF1BO60333 1816 aa13.18□□□□□ -0.3
MCM3-201ENST00000229854 FANCAO15360 1455 aa13.18□□□□□ -0.3
MCM3-201ENST00000229854 TRAK2O60296 914 aa13.18□□□□□ -0.3
MCM3-201ENST00000229854 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
MCM3-201ENST00000229854 PPRC1Q5VV67 1664 aaKnown RBP13.17□□□□□ -0.3
MCM3-201ENST00000229854 MRE11P49959 708 aa13.17□□□□□ -0.3
MCM3-201ENST00000229854 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
MCM3-201ENST00000229854 MYOM2P54296 1465 aa13.17□□□□□ -0.3
MCM3-201ENST00000229854 PANK3Q9H999 370 aa13.17□□□□□ -0.3
MCM3-201ENST00000229854 BCAR3O75815 825 aa13.16□□□□□ -0.3
MCM3-201ENST00000229854 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
MCM3-201ENST00000229854 PLEKHG5O94827 1062 aa13.16□□□□□ -0.3
MCM3-201ENST00000229854 CANXP27824 592 aaKnown RBP13.16□□□□□ -0.3
MCM3-201ENST00000229854 PLEKHH1Q9ULM0 1364 aa13.15□□□□□ -0.3
MCM3-201ENST00000229854 KDM5AP29375 1690 aaKnown RBP13.15□□□□□ -0.3
MCM3-201ENST00000229854 ZC3H13Q5T200 1668 aaKnown RBP13.15□□□□□ -0.3
MCM3-201ENST00000229854 GRPEL1Q9HAV7 217 aa13.15□□□□□ -0.3
MCM3-201ENST00000229854 MAPK8IP3Q9UPT6 1336 aa13.15□□□□□ -0.3
MCM3-201ENST00000229854 SCAF11Q99590 1463 aaKnown RBP13.15□□□□□ -0.3
MCM3-201ENST00000229854 CFAP74Q9C0B2 1584 aa13.14□□□□□ -0.31
MCM3-201ENST00000229854 STAC3Q96MF2 364 aa13.14□□□□□ -0.31
MCM3-201ENST00000229854 ERBB4Q15303 1308 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms