RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 ERBINQ96RT1 1412 aa21.42■■□□□ 1.02
RAB35-201ENST00000229340 NKTRP30414 1462 aaKnown RBP21.42■■□□□ 1.02
RAB35-201ENST00000229340 CGNL1Q0VF96 1302 aa21.41■■□□□ 1.02
RAB35-201ENST00000229340 TRMT2AQ8IZ69 625 aaKnown RBP21.41■■□□□ 1.02
RAB35-201ENST00000229340 PDZRN3Q9UPQ7 1066 aa21.41■■□□□ 1.02
RAB35-201ENST00000229340 NUP153P49790 1475 aaKnown RBP21.41■■□□□ 1.02
RAB35-201ENST00000229340 PCDHB15Q9Y5E8 787 aa21.4■■□□□ 1.02
RAB35-201ENST00000229340 MFAP1P55081 439 aaKnown RBP21.39■■□□□ 1.02
RAB35-201ENST00000229340 CHMP5Q9NZZ3 219 aa21.39■■□□□ 1.02
RAB35-201ENST00000229340 TRPM1Q7Z4N2 1603 aa21.39■■□□□ 1.01
RAB35-201ENST00000229340 FBLN2P98095 1184 aa21.39■■□□□ 1.01
RAB35-201ENST00000229340 BCL2L13Q9BXK5 485 aa21.38■■□□□ 1.01
RAB35-201ENST00000229340 KDM5DQ9BY66 1539 aa21.38■■□□□ 1.01
RAB35-201ENST00000229340 GPATCH8Q9UKJ3 1502 aaKnown RBP21.38■■□□□ 1.01
RAB35-201ENST00000229340 GAS2L3Q86XJ1 694 aa21.38■■□□□ 1.01
RAB35-201ENST00000229340 ADGRL2O95490 1459 aa21.38■■□□□ 1.01
RAB35-201ENST00000229340 CEP170Q5SW79 1584 aa21.37■■□□□ 1.01
RAB35-201ENST00000229340 CENPJQ9HC77 1338 aaPredicted RBP21.37■■□□□ 1.01
RAB35-201ENST00000229340 NEUROD2Q15784 382 aa21.36■■□□□ 1.01
RAB35-201ENST00000229340 MAGI2Q86UL8 1455 aa21.36■■□□□ 1.01
RAB35-201ENST00000229340 E9PSI1 815 aa21.35■■□□□ 1.01
RAB35-201ENST00000229340 PDE3AQ14432 1141 aa21.35■■□□□ 1.01
RAB35-201ENST00000229340 AMER1Q5JTC6 1135 aaPredicted RBP21.35■■□□□ 1.01
RAB35-201ENST00000229340 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■■□□□ 12.2
RAB35-201ENST00000229340 RBM10P98175 930 aaKnown RBP21.34■■□□□ 1.01
RAB35-201ENST00000229340 RLBP1P12271 317 aa21.34■■□□□ 1.01
RAB35-201ENST00000229340 KIAA1211Q6ZU35 1233 aa21.34■■□□□ 1.01
RAB35-201ENST00000229340 C22orf23Q9BZE7 217 aa21.33■■□□□ 1.01
RAB35-201ENST00000229340 CCDC144AA2RUR9 1427 aa21.33■■□□□ 1.01
RAB35-201ENST00000229340 TSPY4P0CV99 314 aa21.32■■□□□ 1
RAB35-201ENST00000229340 TSPY10P0CW01 314 aa21.32■■□□□ 1
RAB35-201ENST00000229340 C9orf84Q5VXU9 1444 aa21.31■■□□□ 1
RAB35-201ENST00000229340 HNRNPMP52272 730 aaKnown RBP eCLIP21.31■■□□□ 11e-7■■■■□ 25.8
RAB35-201ENST00000229340 TROQ12816 1431 aaPredicted RBP21.31■■□□□ 1
RAB35-201ENST00000229340 PODXL2Q9NZ53 605 aa21.31■■□□□ 1
RAB35-201ENST00000229340 CROCC2H7BZ55 1655 aa21.31■■□□□ 1
RAB35-201ENST00000229340 ARID3AQ99856 593 aa21.29■■□□□ 1
RAB35-201ENST00000229340 PDCL3Q9H2J4 239 aa21.29■■□□□ 1
RAB35-201ENST00000229340 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
RAB35-201ENST00000229340 PMFBP1Q8TBY8 1022 aa21.29■■□□□ 1
RAB35-201ENST00000229340 TPM2P07951 284 aa21.28■■□□□ 1
RAB35-201ENST00000229340 DDX11L8A8MPP1 907 aa21.28■■□□□ 1
RAB35-201ENST00000229340 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
RAB35-201ENST00000229340 A2MP01023 1474 aa21.27■■□□□ 1
RAB35-201ENST00000229340 GPRASP1Q5JY77 1395 aa21.27■■□□□ 1
RAB35-201ENST00000229340 HSCBQ8IWL3 235 aa21.27■■□□□ 1
RAB35-201ENST00000229340 WDR7Q9Y4E6 1490 aa21.25■□□□□ 0.99
RAB35-201ENST00000229340 ZNF692Q9BU19 519 aaPredicted RBP21.25■□□□□ 0.99
RAB35-201ENST00000229340 PRDM15P57071 1507 aaPredicted RBP21.25■□□□□ 0.99
RAB35-201ENST00000229340 TNPO1Q92973 898 aaKnown RBP21.25■□□□□ 0.99
RAB35-201ENST00000229340 RAPGEF6Q8TEU7 1601 aa21.25■□□□□ 0.99
RAB35-201ENST00000229340 ITSN2Q9NZM3 1697 aa21.25■□□□□ 0.99
RAB35-201ENST00000229340 WWC1Q8IX03 1113 aa21.23■□□□□ 0.99
RAB35-201ENST00000229340 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
RAB35-201ENST00000229340 RARSP54136 660 aaKnown RBP21.22■□□□□ 0.99
RAB35-201ENST00000229340 FAM13BQ9NYF5 915 aa21.22■□□□□ 0.99
RAB35-201ENST00000229340 RTEL1-TNFRSF6BF6WH68 1400 aa21.22■□□□□ 0.99
RAB35-201ENST00000229340 RWDD1Q9H446 243 aaPredicted RBP21.22■□□□□ 0.99
RAB35-201ENST00000229340 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
RAB35-201ENST00000229340 DISP1Q96F81 1524 aa21.21■□□□□ 0.99
RAB35-201ENST00000229340 PLB1Q6P1J6 1458 aa21.2■□□□□ 0.98
RAB35-201ENST00000229340 FAM135AQ9P2D6 1515 aa21.2■□□□□ 0.98
RAB35-201ENST00000229340 RIPK4P57078 832 aa21.19■□□□□ 0.98
RAB35-201ENST00000229340 PTPRGP23470 1445 aa21.19■□□□□ 0.98
RAB35-201ENST00000229340 KIAA0556O60303 1618 aa21.18■□□□□ 0.98
RAB35-201ENST00000229340 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
RAB35-201ENST00000229340 PLA2R1Q13018 1463 aa21.18■□□□□ 0.98
RAB35-201ENST00000229340 ADCY10Q96PN6 1610 aa21.17■□□□□ 0.98
RAB35-201ENST00000229340 CDC42BPAQ5VT25 1732 aa21.17■□□□□ 0.98
RAB35-201ENST00000229340 A0A0U1RQG5 324 aaPredicted RBP21.16■□□□□ 0.98
RAB35-201ENST00000229340 HSP90AB1P08238 724 aaKnown RBP21.16■□□□□ 0.98
RAB35-201ENST00000229340 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
RAB35-201ENST00000229340 R3HCC1Q9Y3T6 440 aaKnown RBP21.16■□□□□ 0.98
RAB35-201ENST00000229340 PIK3C2GO75747 1445 aa21.16■□□□□ 0.98
RAB35-201ENST00000229340 NASPP49321 788 aaPredicted RBP21.16■□□□□ 0.98
RAB35-201ENST00000229340 PRDM4Q9UKN5 801 aa21.16■□□□□ 0.98
RAB35-201ENST00000229340 ISY1Q9ULR0 285 aaKnown RBP21.16■□□□□ 0.98
RAB35-201ENST00000229340 PBRM1Q86U86 1689 aa21.16■□□□□ 0.98
RAB35-201ENST00000229340 NINLQ9Y2I6 1382 aa21.15■□□□□ 0.98
RAB35-201ENST00000229340 ZSCAN30Q86W11 494 aa21.15■□□□□ 0.98
RAB35-201ENST00000229340 ASXL1Q8IXJ9 1541 aa21.14■□□□□ 0.98
RAB35-201ENST00000229340 MSNP26038 577 aaKnown RBP21.14■□□□□ 0.97
RAB35-201ENST00000229340 CALD1Q05682 793 aaKnown RBP21.14■□□□□ 0.97
RAB35-201ENST00000229340 GBP4Q96PP9 640 aa21.14■□□□□ 0.97
RAB35-201ENST00000229340 OFD1O75665 1012 aa21.13■□□□□ 0.97
RAB35-201ENST00000229340 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
RAB35-201ENST00000229340 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
RAB35-201ENST00000229340 DDIT3P35638 169 aa21.12■□□□□ 0.97
RAB35-201ENST00000229340 MYO5CQ9NQX4 1742 aa21.12■□□□□ 0.97
RAB35-201ENST00000229340 CCDC173Q0VFZ6 552 aa21.11■□□□□ 0.97
RAB35-201ENST00000229340 IFT140Q96RY7 1462 aa21.11■□□□□ 0.97
RAB35-201ENST00000229340 PLEKHD1A6NEE1 506 aa21.11■□□□□ 0.97
RAB35-201ENST00000229340 CHMP7Q8WUX9 453 aaPredicted RBP21.11■□□□□ 0.97
RAB35-201ENST00000229340 CD2BP2O95400 341 aaKnown RBP21.1■□□□□ 0.97
RAB35-201ENST00000229340 FTSJ3Q8IY81 847 aaKnown RBP21.1■□□□□ 0.97
RAB35-201ENST00000229340 ABCC10Q5T3U5 1492 aa21.1■□□□□ 0.97
RAB35-201ENST00000229340 SSFA2P28290 1259 aa21.09■□□□□ 0.97
RAB35-201ENST00000229340 ANP32BQ92688 251 aaKnown RBP21.09■□□□□ 0.97
RAB35-201ENST00000229340 XPCQ01831 940 aaPredicted RBP21.08■□□□□ 0.97
RAB35-201ENST00000229340 RAB3GAP1Q15042 981 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms