RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PRDM15P57071 1507 aaPredicted RBP17.87■□□□□ 0.45
GABPB1-201ENST00000220429 SCAPERQ9BY12 1400 aa17.87■□□□□ 0.45
GABPB1-201ENST00000220429 SPHKAPQ2M3C7 1700 aa17.87■□□□□ 0.45
GABPB1-201ENST00000220429 TET3O43151 1660 aa17.85■□□□□ 0.45
GABPB1-201ENST00000220429 TRPM2O94759 1503 aa17.85■□□□□ 0.45
GABPB1-201ENST00000220429 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
GABPB1-201ENST00000220429 CEP152O94986 1710 aa17.84■□□□□ 0.45
GABPB1-201ENST00000220429 VWDEQ8N2E2 1590 aa17.84■□□□□ 0.45
GABPB1-201ENST00000220429 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
GABPB1-201ENST00000220429 PRDM4Q9UKN5 801 aa17.84■□□□□ 0.45
GABPB1-201ENST00000220429 RNF17Q9BXT8 1623 aaKnown RBP17.83■□□□□ 0.44
GABPB1-201ENST00000220429 PTPRTO14522 1441 aa17.83■□□□□ 0.44
GABPB1-201ENST00000220429 ZBED9Q6R2W3 1325 aa17.83■□□□□ 0.44
GABPB1-201ENST00000220429 CLTCL1P53675 1640 aa17.82■□□□□ 0.44
GABPB1-201ENST00000220429 DDRGK1Q96HY6 314 aa17.82■□□□□ 0.44
GABPB1-201ENST00000220429 CALD1Q05682 793 aaKnown RBP17.82■□□□□ 0.44
GABPB1-201ENST00000220429 KIDINS220Q9ULH0 1771 aa17.82■□□□□ 0.44
GABPB1-201ENST00000220429 PDE4AP27815 886 aa17.81■□□□□ 0.44
GABPB1-201ENST00000220429 MROH1Q8NDA8 1641 aa17.81■□□□□ 0.44
GABPB1-201ENST00000220429 MADDQ8WXG6 1647 aa17.81■□□□□ 0.44
GABPB1-201ENST00000220429 COL17A1Q9UMD9 1497 aaPredicted RBP17.8■□□□□ 0.44
GABPB1-201ENST00000220429 KIF3BO15066 747 aa17.8■□□□□ 0.44
GABPB1-201ENST00000220429 TESK2Q96S53 571 aa17.8■□□□□ 0.44
GABPB1-201ENST00000220429 TCERG1O14776 1098 aaKnown RBP17.79■□□□□ 0.44
GABPB1-201ENST00000220429 KANK1Q14678 1352 aa17.78■□□□□ 0.44
GABPB1-201ENST00000220429 BACH2Q9BYV9 841 aa17.78■□□□□ 0.44
GABPB1-201ENST00000220429 DISP3Q9P2K9 1392 aa17.78■□□□□ 0.44
GABPB1-201ENST00000220429 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
GABPB1-201ENST00000220429 CENPJQ9HC77 1338 aaPredicted RBP17.77■□□□□ 0.43
GABPB1-201ENST00000220429 ZNF518AQ6AHZ1 1483 aa17.76■□□□□ 0.43
GABPB1-201ENST00000220429 KTN1Q86UP2 1357 aaKnown RBP17.75■□□□□ 0.43
GABPB1-201ENST00000220429 RGS3P49796 1198 aa17.75■□□□□ 0.43
GABPB1-201ENST00000220429 CLCN1P35523 988 aa17.75■□□□□ 0.43
GABPB1-201ENST00000220429 PNISRQ8TF01 805 aaKnown RBP17.75■□□□□ 0.43
GABPB1-201ENST00000220429 IQGAP1P46940 1657 aa17.74■□□□□ 0.43
GABPB1-201ENST00000220429 RALBP1Q15311 655 aa17.74■□□□□ 0.43
GABPB1-201ENST00000220429 CD109Q6YHK3 1445 aa17.73■□□□□ 0.43
GABPB1-201ENST00000220429 MYBBP1AQ9BQG0 1328 aaKnown RBP17.73■□□□□ 0.43
GABPB1-201ENST00000220429 TMC1Q8TDI8 760 aa17.73■□□□□ 0.43
GABPB1-201ENST00000220429 PDCL3Q9H2J4 239 aa17.73■□□□□ 0.43
GABPB1-201ENST00000220429 CFAP74Q9C0B2 1584 aa17.73■□□□□ 0.43
GABPB1-201ENST00000220429 PER1O15534 1290 aaPredicted RBP17.72■□□□□ 0.43
GABPB1-201ENST00000220429 EFCAB6Q5THR3 1501 aa17.72■□□□□ 0.43
GABPB1-201ENST00000220429 BRD4O60885 1362 aaPredicted RBP17.71■□□□□ 0.43
GABPB1-201ENST00000220429 FRAT2O75474 233 aaPredicted RBP17.71■□□□□ 0.43
GABPB1-201ENST00000220429 PPRC1Q5VV67 1664 aaKnown RBP17.71■□□□□ 0.43
GABPB1-201ENST00000220429 UGGT1Q9NYU2 1555 aa17.71■□□□□ 0.43
GABPB1-201ENST00000220429 NEURL4Q96JN8 1562 aa17.7■□□□□ 0.42
GABPB1-201ENST00000220429 RNF123Q5XPI4 1314 aa17.7■□□□□ 0.42
GABPB1-201ENST00000220429 PARD3Q8TEW0 1356 aa17.7■□□□□ 0.42
GABPB1-201ENST00000220429 POGZQ7Z3K3 1410 aa17.7■□□□□ 0.42
GABPB1-201ENST00000220429 MS4A1P11836 297 aa17.7■□□□□ 0.42
GABPB1-201ENST00000220429 TMF1P82094 1093 aa17.7■□□□□ 0.42
GABPB1-201ENST00000220429 STAC3Q96MF2 364 aa17.7■□□□□ 0.42
GABPB1-201ENST00000220429 KIF1BO60333 1816 aa17.69■□□□□ 0.42
GABPB1-201ENST00000220429 TAF7LQ5H9L4 462 aa17.69■□□□□ 0.42
GABPB1-201ENST00000220429 LRPPRCP42704 1394 aaKnown RBP17.68■□□□□ 0.42
GABPB1-201ENST00000220429 LMTK2Q8IWU2 1503 aa17.68■□□□□ 0.42
GABPB1-201ENST00000220429 KIAA1210Q9ULL0 1709 aa17.68■□□□□ 0.42
GABPB1-201ENST00000220429 FRMPD1Q5SYB0 1578 aa17.67■□□□□ 0.42
GABPB1-201ENST00000220429 L1TD1Q5T7N2 865 aaKnown RBP17.67■□□□□ 0.42
GABPB1-201ENST00000220429 MLH3Q9UHC1 1453 aa17.67■□□□□ 0.42
GABPB1-201ENST00000220429 HECW2Q9P2P5 1572 aa17.66■□□□□ 0.42
GABPB1-201ENST00000220429 SMG6Q86US8 1419 aaKnown RBP17.66■□□□□ 0.42
GABPB1-201ENST00000220429 SCAF11Q99590 1463 aaKnown RBP17.66■□□□□ 0.42
GABPB1-201ENST00000220429 PANK3Q9H999 370 aa17.66■□□□□ 0.42
GABPB1-201ENST00000220429 CFAP65Q6ZU64 1925 aaKnown RBP17.66■□□□□ 0.42
GABPB1-201ENST00000220429 MROH2AA6NES4 1674 aa17.65■□□□□ 0.42
GABPB1-201ENST00000220429 SLC4A3P48751 1232 aa17.65■□□□□ 0.42
GABPB1-201ENST00000220429 IFT172Q9UG01 1749 aa17.65■□□□□ 0.42
GABPB1-201ENST00000220429 MAP3K4Q9Y6R4 1608 aa17.65■□□□□ 0.42
GABPB1-201ENST00000220429 NLRP13Q86W25 1043 aa17.64■□□□□ 0.42
GABPB1-201ENST00000220429 ABCA6Q8N139 1617 aa17.64■□□□□ 0.41
GABPB1-201ENST00000220429 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
GABPB1-201ENST00000220429 SENP3-EIF4A1A0A087X0R7 540 aa17.63■□□□□ 0.41
GABPB1-201ENST00000220429 MYOM2P54296 1465 aa17.63■□□□□ 0.41
GABPB1-201ENST00000220429 BBXQ8WY36 941 aaPredicted RBP17.62■□□□□ 0.41
GABPB1-201ENST00000220429 CC2D1BQ5T0F9 858 aaKnown RBP17.61■□□□□ 0.41
GABPB1-201ENST00000220429 NUDCQ9Y266 331 aa17.61■□□□□ 0.41
GABPB1-201ENST00000220429 NEO1Q92859 1461 aa17.6■□□□□ 0.41
GABPB1-201ENST00000220429 ADGRF5Q8IZF2 1346 aa17.6■□□□□ 0.41
GABPB1-201ENST00000220429 TPM2P07951 284 aa17.59■□□□□ 0.41
GABPB1-201ENST00000220429 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
GABPB1-201ENST00000220429 NPATQ14207 1427 aa17.59■□□□□ 0.41
GABPB1-201ENST00000220429 ADGRB3O60242 1522 aa17.58■□□□□ 0.4
GABPB1-201ENST00000220429 CFAP70Q5T0N1 1121 aa17.58■□□□□ 0.4
GABPB1-201ENST00000220429 GGT6Q6P531 493 aa17.58■□□□□ 0.4
GABPB1-201ENST00000220429 POGKQ9P215 609 aa17.57■□□□□ 0.4
GABPB1-201ENST00000220429 MYOM1P52179 1685 aa17.57■□□□□ 0.4
GABPB1-201ENST00000220429 SYNMO15061 1565 aa17.57■□□□□ 0.4
GABPB1-201ENST00000220429 RAPGEF3O95398 923 aa17.57■□□□□ 0.4
GABPB1-201ENST00000220429 EIF3AQ14152 1382 aaKnown RBP17.57■□□□□ 0.4
GABPB1-201ENST00000220429 NRXN1Q9ULB1 1477 aa17.57■□□□□ 0.4
GABPB1-201ENST00000220429 ABCC3O15438 1527 aa17.56■□□□□ 0.4
GABPB1-201ENST00000220429 RICTORQ6R327 1708 aa17.55■□□□□ 0.4
GABPB1-201ENST00000220429 CDCA8Q53HL2 280 aa17.55■□□□□ 0.4
GABPB1-201ENST00000220429 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
GABPB1-201ENST00000220429 DIP2CQ9Y2E4 1556 aa17.54■□□□□ 0.4
GABPB1-201ENST00000220429 KDM5AP29375 1690 aaKnown RBP17.54■□□□□ 0.4
GABPB1-201ENST00000220429 PPLO60437 1756 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms