RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 BCL2L13Q9BXK5 485 aa28.62■■■□□ 2.17
TARBP1-201ENST00000040877 FAM161AQ3B820 660 aa28.62■■■□□ 2.17
TARBP1-201ENST00000040877 HFM1A2PYH4 1435 aa28.61■■■□□ 2.17
TARBP1-201ENST00000040877 KIF7Q2M1P5 1343 aa28.6■■■□□ 2.17
TARBP1-201ENST00000040877 GNAI1P63096 354 aa28.6■■■□□ 2.17
TARBP1-201ENST00000040877 TOMM22Q9NS69 142 aa28.58■■■□□ 2.17
TARBP1-201ENST00000040877 C9orf78Q9NZ63 289 aaPredicted RBP28.58■■■□□ 2.17
TARBP1-201ENST00000040877 AAMPQ13685 434 aa28.58■■■□□ 2.17
TARBP1-201ENST00000040877 PHF14O94880 888 aa28.57■■■□□ 2.16
TARBP1-201ENST00000040877 RUFY2Q8WXA3 655 aa28.57■■■□□ 2.16
TARBP1-201ENST00000040877 DZIP1LQ8IYY4 767 aaKnown RBP28.56■■■□□ 2.16
TARBP1-201ENST00000040877 CNTLNQ9NXG0 1405 aa28.56■■■□□ 2.16
TARBP1-201ENST00000040877 COG6Q9Y2V7 657 aa28.56■■■□□ 2.16
TARBP1-201ENST00000040877 EHBP1L1Q8N3D4 1523 aa28.56■■■□□ 2.16
TARBP1-201ENST00000040877 RILPL2Q969X0 211 aa28.55■■■□□ 2.16
TARBP1-201ENST00000040877 AFAP1Q8N556 730 aa28.55■■■□□ 2.16
TARBP1-201ENST00000040877 ATF3P18847 181 aa28.54■■■□□ 2.16
TARBP1-201ENST00000040877 CRBNQ96SW2 442 aa28.54■■■□□ 2.16
TARBP1-201ENST00000040877 GZF1Q9H116 711 aaPredicted RBP28.54■■■□□ 2.16
TARBP1-201ENST00000040877 GOLGA6L3A6NEY3 463 aa28.53■■■□□ 2.16
TARBP1-201ENST00000040877 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
TARBP1-201ENST00000040877 EXOC6Q8TAG9 804 aa28.53■■■□□ 2.16
TARBP1-201ENST00000040877 ATP6V1DQ9Y5K8 247 aa28.53■■■□□ 2.16
TARBP1-201ENST00000040877 SYNJ1O43426 1573 aa28.53■■■□□ 2.16
TARBP1-201ENST00000040877 EIF2S2P20042 333 aaKnown RBP28.52■■■□□ 2.16
TARBP1-201ENST00000040877 TOPBP1Q92547 1522 aa28.52■■■□□ 2.16
TARBP1-201ENST00000040877 DIAPH3Q9NSV4 1193 aa28.52■■■□□ 2.16
TARBP1-201ENST00000040877 REC8O95072 547 aa28.52■■■□□ 2.16
TARBP1-201ENST00000040877 RASSF8Q8NHQ8 419 aa28.52■■■□□ 2.16
TARBP1-201ENST00000040877 PLIN1O60240 522 aa28.51■■■□□ 2.15
TARBP1-201ENST00000040877 RAPGEF4Q8WZA2 1011 aa28.51■■■□□ 2.15
TARBP1-201ENST00000040877 DDX11L8A8MPP1 907 aa28.5■■■□□ 2.15
TARBP1-201ENST00000040877 BRD4O60885 1362 aaPredicted RBP28.49■■■□□ 2.15
TARBP1-201ENST00000040877 PRXQ9BXM0 1461 aa28.49■■■□□ 2.15
TARBP1-201ENST00000040877 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
TARBP1-201ENST00000040877 NOL8Q76FK4 1167 aaKnown RBP28.49■■■□□ 2.15
TARBP1-201ENST00000040877 TROQ12816 1431 aaPredicted RBP28.49■■■□□ 2.15
TARBP1-201ENST00000040877 PDE4AP27815 886 aa28.49■■■□□ 2.15
TARBP1-201ENST00000040877 HSP90AB4PQ58FF6 505 aa28.48■■■□□ 2.15
TARBP1-201ENST00000040877 SF3A1Q15459 793 aaKnown RBP28.48■■■□□ 2.15
TARBP1-201ENST00000040877 FKBP5Q13451 457 aaPredicted RBP28.47■■■□□ 2.15
TARBP1-201ENST00000040877 WASHC2AQ641Q2 1341 aa28.47■■■□□ 2.15
TARBP1-201ENST00000040877 CPLX2Q6PUV4 134 aaKnown RBP28.46■■■□□ 2.15
TARBP1-201ENST00000040877 C9orf84Q5VXU9 1444 aa28.45■■■□□ 2.15
TARBP1-201ENST00000040877 TSPYL4Q9UJ04 414 aa28.45■■■□□ 2.14
TARBP1-201ENST00000040877 SCAPERQ9BY12 1400 aa28.45■■■□□ 2.14
TARBP1-201ENST00000040877 ZKSCAN1P17029 563 aaPredicted RBP28.45■■■□□ 2.14
TARBP1-201ENST00000040877 IFIT2P09913 472 aaKnown RBP28.44■■■□□ 2.14
TARBP1-201ENST00000040877 POLA1P09884 1462 aaPredicted RBP28.44■■■□□ 2.14
TARBP1-201ENST00000040877 FAM184AQ8NB25 1140 aa28.43■■■□□ 2.14
TARBP1-201ENST00000040877 GGNBP2Q9H3C7 697 aa28.43■■■□□ 2.14
TARBP1-201ENST00000040877 NESP48681 1621 aa28.43■■■□□ 2.14
TARBP1-201ENST00000040877 H3BQV1 296 aa28.43■■■□□ 2.14
TARBP1-201ENST00000040877 IFFO2Q5TF58 517 aa28.43■■■□□ 2.14
TARBP1-201ENST00000040877 SYNE3Q6ZMZ3 975 aa28.43■■■□□ 2.14
TARBP1-201ENST00000040877 CABP2Q9NPB3 220 aa28.43■■■□□ 2.14
TARBP1-201ENST00000040877 HECW1Q76N89 1606 aa28.43■■■□□ 2.14
TARBP1-201ENST00000040877 AMOTL1Q8IY63 956 aa28.42■■■□□ 2.14
TARBP1-201ENST00000040877 NOL10Q9BSC4 688 aaKnown RBP28.42■■■□□ 2.14
TARBP1-201ENST00000040877 AKAP17AQ02040 695 aaKnown RBP28.42■■■□□ 2.14
TARBP1-201ENST00000040877 USP35Q9P2H5 1018 aa28.42■■■□□ 2.14
TARBP1-201ENST00000040877 GPRASP1Q5JY77 1395 aa28.42■■■□□ 2.14
TARBP1-201ENST00000040877 G3BP1Q13283 466 aaKnown RBP eCLIP28.41■■■□□ 2.14
TARBP1-201ENST00000040877 CC2D2AQ9P2K1 1620 aa28.41■■■□□ 2.14
TARBP1-201ENST00000040877 TMEM132EQ6IEE7 984 aa28.41■■■□□ 2.14
TARBP1-201ENST00000040877 KIAA1107Q9UPP5 1409 aa28.41■■■□□ 2.14
TARBP1-201ENST00000040877 FOXD4L1Q9NU39 408 aa28.4■■■□□ 2.14
TARBP1-201ENST00000040877 SLC52A1Q9NWF4 448 aa28.4■■■□□ 2.14
TARBP1-201ENST00000040877 CFAP70Q5T0N1 1121 aa28.4■■■□□ 2.14
TARBP1-201ENST00000040877 MARCH6O60337 910 aa28.39■■■□□ 2.14
TARBP1-201ENST00000040877 NLRP6P59044 892 aa28.39■■■□□ 2.14
TARBP1-201ENST00000040877 SKOR2Q2VWA4 1001 aaPredicted RBP28.38■■■□□ 2.13
TARBP1-201ENST00000040877 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
TARBP1-201ENST00000040877 RNF20Q5VTR2 975 aa28.37■■■□□ 2.13
TARBP1-201ENST00000040877 TXNDC2Q86VQ3 553 aa28.36■■■□□ 2.13
TARBP1-201ENST00000040877 SNAPC4Q5SXM2 1469 aa28.36■■■□□ 2.13
TARBP1-201ENST00000040877 HMOX1P09601 288 aa28.35■■■□□ 2.13
TARBP1-201ENST00000040877 GAS2L2Q8NHY3 880 aa28.35■■■□□ 2.13
TARBP1-201ENST00000040877 NLRP2Q9NX02 1062 aa28.34■■■□□ 2.13
TARBP1-201ENST00000040877 THEMISQ8N1K5 641 aaPredicted RBP28.34■■■□□ 2.13
TARBP1-201ENST00000040877 ERC2O15083 957 aa28.33■■■□□ 2.13
TARBP1-201ENST00000040877 MTHFSP49914 203 aa28.33■■■□□ 2.13
TARBP1-201ENST00000040877 SYTL4Q96C24 671 aaPredicted RBP28.33■■■□□ 2.13
TARBP1-201ENST00000040877 NECTIN2Q92692 538 aa28.31■■■□□ 2.12
TARBP1-201ENST00000040877 RPGRIP1LQ68CZ1 1315 aa28.31■■■□□ 2.12
TARBP1-201ENST00000040877 MSH5O43196 834 aa28.29■■■□□ 2.12
TARBP1-201ENST00000040877 MEX3CQ5U5Q3 659 aaKnown RBP28.29■■■□□ 2.12
TARBP1-201ENST00000040877 INTS3Q68E01 1043 aaKnown RBP28.29■■■□□ 2.12
TARBP1-201ENST00000040877 ZNF692Q9BU19 519 aaPredicted RBP28.29■■■□□ 2.12
TARBP1-201ENST00000040877 TRDNQ13061 729 aa28.28■■■□□ 2.12
TARBP1-201ENST00000040877 KIAA0586Q9BVV6 1533 aa28.28■■■□□ 2.12
TARBP1-201ENST00000040877 VPS37DQ86XT2 251 aa28.28■■■□□ 2.12
TARBP1-201ENST00000040877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.28■■■□□ 2.124e-6■■■■■ 30.2
TARBP1-201ENST00000040877 TRIM29Q14134 588 aa28.27■■■□□ 2.12
TARBP1-201ENST00000040877 RIC3Q7Z5B4 369 aa28.27■■■□□ 2.12
TARBP1-201ENST00000040877 TIAM1Q13009 1591 aa28.27■■■□□ 2.12
TARBP1-201ENST00000040877 DDX49Q9Y6V7 483 aaKnown RBP28.27■■■□□ 2.12
TARBP1-201ENST00000040877 PPP2R1AP30153 589 aa28.26■■■□□ 2.11
TARBP1-201ENST00000040877 PRAM1Q96QH2 718 aa28.26■■■□□ 2.11
TARBP1-201ENST00000040877 ADAMTS8Q9UP79 889 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms