RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Adgrl3Q80TS3 1537 aa17.23■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Nsd2Q8BVE8 1365 aa17.23■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Rad21Q61550 635 aaKnown RBP17.22■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Cdc42bpbQ7TT50 1713 aa17.22■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Spag9Q58A65 1321 aaKnown RBP17.22■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Esx1O88933 382 aa17.21■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Pde4cQ3UEI1 686 aa17.21■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Rwdd1Q9CQK7 243 aa17.21■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Uggt2E9Q4X2 1504 aa17.2■□□□□ 0.34
Ssr1-203ENSMUST00000225246 NhsB1AV60 1647 aa17.2■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Fgd6Q69ZL1 1399 aa17.19■□□□□ 0.34
Ssr1-203ENSMUST00000225246 ChgaP26339 463 aaKnown RBP17.19■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Fam184bQ0KK56 942 aa17.19■□□□□ 0.34
Ssr1-203ENSMUST00000225246 EspnQ9ET47 871 aa17.19■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Abca17E9PX95 1733 aa17.18■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Itsn2Q9Z0R6 1659 aa17.18■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Mroh3A0A1D5RM54 893 aa17.17■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Srcin1Q9QWI6 1250 aa17.17■□□□□ 0.34
Ssr1-203ENSMUST00000225246 ShprhQ7TPQ3 1674 aa17.17■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Kif1bQ60575 1816 aaKnown RBP17.16■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Abcc6Q9R1S7 1498 aa17.15■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Usp54Q8BL06 1588 aaKnown RBP17.15■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Fkbp15Q6P9Q6 1216 aaKnown RBP17.14■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Smc5Q8CG46 1101 aaKnown RBP17.14■□□□□ 0.34
Ssr1-203ENSMUST00000225246 Slc4a1apE9PX68 744 aa17.14■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Abca8bQ8K440 1620 aa17.14■□□□□ 0.33
Ssr1-203ENSMUST00000225246 CrbnQ8C7D2 445 aa17.13■□□□□ 0.33
Ssr1-203ENSMUST00000225246 AknaQ80VW7 1404 aa17.13■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Abcc1O35379 1528 aa17.13■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Mapk8ip3Q9ESN9 1337 aa17.12■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Gm156Q58A37 223 aa17.12■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Tmc1Q8R4P5 757 aa17.12■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Usp19Q3UJD6 1360 aa17.12■□□□□ 0.33
Ssr1-203ENSMUST00000225246 NudcO35685 332 aaKnown RBP17.11■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Zbtb4Q5F293 982 aa17.11■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Stard8Q8K031 1019 aa17.11■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Ylpm1Q9R0I7 1386 aaKnown RBP17.11■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Cep152A2AUM9 1736 aaKnown RBP17.1■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Irx3P81067 507 aa17.1■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Mre11Q61216 706 aa17.1■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Zbtb7cQ8VCZ7 619 aa17.1■□□□□ 0.33
Ssr1-203ENSMUST00000225246 PtprtQ99M80 1454 aa17.09■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Gprasp1Q5U4C1 1347 aa17.09■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Ppm1gQ61074 542 aa17.09■□□□□ 0.33
Ssr1-203ENSMUST00000225246 CanxP35564 591 aaKnown RBP17.08■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Gtf3c3Q3TMP1 882 aa17.08■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Chmp5Q9D7S9 219 aa17.08■□□□□ 0.33
Ssr1-203ENSMUST00000225246 Kdm5aQ3UXZ9 1690 aa17.08■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Kidins220E9Q9B7 1793 aa17.07■□□□□ 0.32
Ssr1-203ENSMUST00000225246 AampJ3QN89 436 aa17.07■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Dnai1Q8C0M8 701 aa17.07■□□□□ 0.32
Ssr1-203ENSMUST00000225246 B4galnt3Q6L8S8 986 aa17.06■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Ccdc30Q8BVF4 654 aa17.06■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Tmem131lQ3U3D7 1597 aa17.05■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Pdlim2Q8R1G6 349 aa17.05■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Xrn1P97789 1719 aaKnown RBP17.05■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Nphp4P59240 1425 aa17.04■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Speer4f1Q9D5Q6 258 aa17.04■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Map3k5O35099 1380 aa17.04■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Kif7B7ZNG0 1348 aa17.04■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Znf521Q6KAS7 1311 aa17.04■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Ralbp1Q62172 648 aa17.03■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Sart3Q9JLI8 962 aaKnown RBP17.03■□□□□ 0.32
Ssr1-203ENSMUST00000225246 KdrP35918 1367 aa17.03■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Myo5cE9Q1F5 1742 aa17.03■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Atp10dQ8K2X1 1416 aa17.03■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Myom2Q14BI5 1463 aa17.02■□□□□ 0.32
Ssr1-203ENSMUST00000225246 Uspl1Q3ULM6 1089 aa17.02■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Rims1Q99NE5 1463 aa17.02■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Talpid3E9PV87 1520 aa17.01■□□□□ 0.31
Ssr1-203ENSMUST00000225246 DnmbpQ6TXD4 1580 aa17.01■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Myom1Q62234 1667 aaKnown RBP17■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Gtf2e1Q9D0D5 440 aa17■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Zfyve16Q80U44 1528 aa17■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Fndc1E9Q043 1732 aa16.99■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Kiaa1107Q80TK0 1369 aa16.99■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Nos1Q9Z0J4 1429 aa16.99■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Abca8aQ8K442 1620 aa16.99■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Map4k4P97820 1233 aaKnown RBP16.98■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Dcaf11Q91VU6 549 aa16.98■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Iqgap3F8VQ29 1632 aa16.98■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Trpm1Q2TV84 1622 aa16.98■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Kdm2aP59997 1161 aa16.98■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Gm20521D3Z5F7 333 aa16.97■□□□□ 0.31
Ssr1-203ENSMUST00000225246 DaxxO35613 739 aa16.97■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Ipo8Q7TMY7 1010 aa16.97■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Golga2Q921M4 999 aa16.97■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Dbr1Q923B1 550 aa16.97■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Sall3Q62255 1320 aa16.96■□□□□ 0.31
Ssr1-203ENSMUST00000225246 Nlrp6Q91WS2 869 aa16.96■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Ttc21bQ0HA38 1315 aa16.95■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Myo3aQ8K3H5 1613 aa16.95■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Chd1P40201 1711 aa16.95■□□□□ 0.3
Ssr1-203ENSMUST00000225246 ErbinQ80TH2 1402 aa16.95■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Cdk5rap2Q8K389 1822 aa16.95■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Ncbp3Q8BZR9 615 aaKnown RBP16.95■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Igf1rQ60751 1373 aa16.94■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Ppp1r9bQ6R891 817 aaKnown RBP16.93■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Usp40Q8BWR4 1235 aa16.93■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Ythdc2B2RR83 1445 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 118.6 ms