RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Rufy1Q8BIJ7 712 aa13.01□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Vps8Q0P5W1 1427 aa13□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Phldb1Q6PDH0 1371 aaKnown RBP12.99□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Trap1aP19473 224 aa12.99□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Nop14Q8R3N1 860 aaKnown RBP12.99□□□□□ -0.33
Nipbl-201ENSMUST00000052965 A0A1L1SQF0 893 aa12.99□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Lemd3Q9WU40 921 aa12.99□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Ppm1eQ80TL0 749 aa12.99□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Dctn1O08788 1281 aa12.98□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Pdia4P08003 638 aaKnown RBP12.98□□□□□ -0.33
Nipbl-201ENSMUST00000052965 PdcQ9QW08 244 aa12.98□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Rsph4aQ8BYM7 716 aa12.98□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Shroom4Q1W617 1475 aa12.98□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Top2bQ64511 1612 aa12.98□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Cetn4Q8K4K1 168 aa12.97□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Efcab5A0JP43 1406 aa12.97□□□□□ -0.33
Nipbl-201ENSMUST00000052965 1700010I14RikQ7TPG0 532 aa12.97□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Srek1Q8BZX4 494 aaKnown RBP12.97□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Dapk1Q80YE7 1442 aa12.97□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Kif3cO35066 796 aa12.97□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Fam184aE9PW83 1143 aa12.96□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Ppp2r3aB2RXC8 1150 aa12.96□□□□□ -0.34
Nipbl-201ENSMUST00000052965 CenpjQ569L8 1344 aa12.96□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Fez2Q6TYB5 348 aa12.96□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Ipo7Q9EPL8 1038 aaKnown RBP12.96□□□□□ -0.34
Nipbl-201ENSMUST00000052965 KarsQ99MN1 595 aaKnown RBP12.95□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Tpm4Q6IRU2 248 aa12.95□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Hook1Q8BIL5 728 aa12.95□□□□□ -0.34
Nipbl-201ENSMUST00000052965 ScaperF8VQ70 1398 aaKnown RBP12.95□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Znf330Q922H9 316 aa12.95□□□□□ -0.34
Nipbl-201ENSMUST00000052965 OptnQ8K3K8 584 aa12.95□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Arglu1Q3UL36 271 aaKnown RBP12.95□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Gabpb2P81069 414 aa12.94□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Ubxn4Q8VCH8 506 aa12.94□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Q3TQI7 289 aaKnown RBP12.94□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Gse1Q3U3C9 1213 aa12.94□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Chmp4cQ9D7F7 232 aa12.94□□□□□ -0.34
Nipbl-201ENSMUST00000052965 PnisrA2AJT4 805 aaKnown RBP12.94□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Sptbn5F6UCX4 1208 aa12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Tnpo1Q8BFY9 898 aaKnown RBP12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Drc7Q6V3W6 876 aa12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Stk26Q99JT2 416 aa12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 LrpprcQ6PB66 1392 aaKnown RBP12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Ncapd3Q6ZQK0 1506 aa12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Zkscan1Q8BGS3 561 aaKnown RBP12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Slc4a1apE9PX68 744 aa12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Gpatch3Q8BIY1 525 aa12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Ccdc83Q9D4V3 305 aa12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Map3k1P53349 1493 aa12.93□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Spag5Q7TME2 1165 aa12.92□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Dnai2A2AC93 623 aa12.92□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Ccdc47Q9D024 483 aaKnown RBP12.92□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Tiam1Q60610 1591 aa12.91□□□□□ -0.34
Nipbl-201ENSMUST00000052965 WrnO09053 1401 aa12.91□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Ccdc146E9Q9F7 977 aa12.91□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Pank3Q8R2W9 370 aa12.91□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Bicd2Q921C5 820 aa12.91□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Otud6bQ8K2H2 294 aa12.91□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Cchcr1Q8K2I2 770 aa12.91□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Nol10Q5RJG1 687 aaKnown RBP12.9□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Ciz1Q8VEH2 845 aa12.9□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Rnf214Q8BFU3 668 aaKnown RBP12.9□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Brpf1B2RRD7 1212 aa12.9□□□□□ -0.34
Nipbl-201ENSMUST00000052965 Birc3O08863 600 aa12.89□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Cep112Q5PR68 954 aa12.89□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Clstn1Q9EPL2 979 aa12.89□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Arhgef5E9Q7D5 1581 aa12.89□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Vgll3P85442 326 aa12.88□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Ssh1Q76I79 1042 aa12.88□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Smc3Q9CW03 1217 aaKnown RBP12.88□□□□□ -0.35
Nipbl-201ENSMUST00000052965 NrkQ9R0G8 1455 aa12.88□□□□□ -0.35
Nipbl-201ENSMUST00000052965 SkilQ60665 675 aa12.88□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Tex2Q6ZPJ0 1128 aaKnown RBP12.88□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Gm45140A0A0N4SUM8 220 aa12.87□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Sycp1Q62209 993 aa12.87□□□□□ -0.35
Nipbl-201ENSMUST00000052965 AnlnQ8K298 1121 aaKnown RBP12.87□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Psme1P97371 249 aa12.87□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Mcm2P97310 904 aa12.86□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Kif3bQ61771 747 aa12.86□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Med4Q9CQA5 270 aa12.86□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Rnf20Q5DTM8 973 aa12.86□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Tsen2Q6P7W5 460 aa12.86□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Tmco3Q8BH01 678 aa12.86□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Cc2d2bA0A286YDU8 1405 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Rab11fip3Q8CHD8 1047 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Evc2Q8K1G2 1220 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Hap1O35668 628 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Plin1Q8CGN5 517 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Dnaaf4Q8R368 420 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Jakmip2D3YXK0 820 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 CastP51125 788 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Map9Q3TRR0 646 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Ccdc30Q8BVF4 654 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Ccdc60Q8C4J0 545 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 MyclP10166 368 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 AcrbpQ3V140 540 aa12.85□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Samd1D3YXK1 519 aa12.84□□□□□ -0.35
Nipbl-201ENSMUST00000052965 GsdmaQ9EST1 446 aa12.84□□□□□ -0.35
Nipbl-201ENSMUST00000052965 AppP12023 770 aa12.84□□□□□ -0.35
Nipbl-201ENSMUST00000052965 Polr3gQ6NXY9 223 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms