RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Pcf11G3X9Z4 1553 aa12.33□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Aebp1Q640N1 1128 aa12.32□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Ap3b1Q9Z1T1 1105 aa12.32□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 BlmO88700 1416 aa12.31□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Fkbp15Q6P9Q6 1216 aaKnown RBP12.31□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Emp3O35912 163 aa12.3□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Setbp1Q9Z180 1582 aa12.29□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Arhgap31A6X8Z5 1425 aa12.28□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Eea1Q8BL66 1411 aa12.28□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 AI481877A2ALV5 1481 aa12.28□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Znf608Q56A10 1511 aa12.27□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Kdm5bQ80Y84 1544 aa12.27□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Rrbp1Q99PL5 1605 aaKnown RBP12.27□□□□□ -0.44
Ssbp1-201ENSMUST00000031971 Mroh2aD3Z750 1679 aa12.27□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Vars2Q3U2A8 1060 aa12.27□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Arhgef5E9Q7D5 1581 aa12.26□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Sirt1Q923E4 737 aa12.25□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Pde8bE9Q4S1 865 aa12.24□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Suz12Q80U70 741 aaKnown RBP12.24□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Lrrc9Q8CDN9 1456 aa12.24□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Cul7Q8VE73 1689 aa12.24□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Rapgef6Q5NCJ1 1609 aa12.23□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Ccdc141E9Q8Q6 1531 aa12.23□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Kif27Q7M6Z4 1394 aa12.23□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Art1Q60935 325 aa12.22□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 NhsB1AV60 1647 aa12.22□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Gm1043A0A140LJC2 1431 aa12.21□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Ncoa3O09000 1398 aa12.21□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 Foxd4Q60688 444 aa12.21□□□□□ -0.45
Ssbp1-201ENSMUST00000031971 LtbrP50284 415 aa12.2□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Arhgef11Q68FM7 1552 aa12.2□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Naip1Q9QWK5 1403 aa12.2□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Gm36176A0A1W2P8D5 158 aa12.19□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Psen1P49769 467 aa12.19□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Fam160a1Q505K2 1081 aa12.19□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Tsr1Q5SWD9 803 aa12.19□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Scaf8Q6DID3 1268 aa12.19□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Ak9G3UYQ4 1894 aa12.18□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Ttbk1Q6PCN3 1308 aa12.17□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Gcc2Q8CHG3 1679 aa12.17□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Suv39h2Q9EQQ0 477 aa12.17□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 CntlnA2AM05 1397 aa12.17□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Arid3cA6PWV5 409 aa12.16□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Mug1P28665 1476 aa12.15□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Magi1Q6RHR9 1471 aa12.15□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Wdr7Q920I9 1489 aa12.15□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Tiam1Q60610 1591 aa12.15□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Atp10dQ8K2X1 1416 aa12.15□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Fam193bQ3U2K0 892 aa12.15□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Pcdhgb4Q91XX6 912 aa12.15□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Igf1rQ60751 1373 aa12.15□□□□□ -0.46
Ssbp1-201ENSMUST00000031971 Ncoa2Q61026 1462 aa12.14□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Fancd2Q80V62 1450 aa12.14□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Prex2Q3LAC4 1598 aa12.14□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Lmod2Q3UHZ5 550 aa12.14□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Kcnc4Q8R1C0 628 aa12.14□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Peg3Q3URU2 1571 aa12.13□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Kiaa1551Q5DTW7 1521 aa12.13□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Slc27a5Q4LDG0 689 aa12.13□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 NntQ61941 1086 aaKnown RBP12.13□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Clasp1Q80TV8 1535 aaKnown RBP12.12□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 GnpatP98192 678 aa12.12□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 ChgaP26339 463 aaKnown RBP12.11□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Erbb4Q61527 1308 aa12.11□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Depdc5P61460 1591 aa12.1□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Wfs1P56695 890 aa12.1□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Mkrn3Q60764 544 aa12.1□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Clcn1Q64347 994 aa12.1□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Wbp1lQ8BGW2 348 aa12.1□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Kiaa1210E9Q0C6 1637 aa12.1□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Cdc42bpaQ3UU96 1719 aa12.09□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Abca8bQ8K440 1620 aa12.09□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Ppp1r18Q8BQ30 594 aa12.09□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Lce1mQ9CR91 182 aa12.09□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 NexmifQ5DTT1 1515 aa12.09□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Mapkbp1Q6NS57 1503 aa12.09□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Ttc37F8VPK0 1563 aa12.09□□□□□ -0.47
Ssbp1-201ENSMUST00000031971 Fam208aQ69ZR9 1610 aaKnown RBP12.08□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 Zfyve16Q80U44 1528 aa12.07□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 Col9a1Q05722 921 aa12.07□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 Prpmp5E9PXN1 296 aa12.05□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 Gm20503G3UZK1 150 aa12.05□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 Hmx2P43687 273 aa12.05□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 Rccd1Q8BTU7 377 aa12.05□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 Prr7Q3V0I2 269 aa12.04□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 Lmtk2Q3TYD6 1471 aa12.03□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 Map2k7Q8CE90 535 aa12.03□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 Gpc1Q9QZF2 557 aa12.03□□□□□ -0.48
Ssbp1-201ENSMUST00000031971 XpcP51612 930 aa12.02□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Klra1P20937 262 aa12.01□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Pax4P32115 349 aa12.01□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Tpcn2Q8BWC0 731 aa12.01□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 A2mQ6GQT1 1474 aa12.01□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Dhx57Q6P5D3 1388 aaKnown RBP12□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Arhgef40Q3UPH7 1517 aa12□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Abca9Q8K449 1623 aa12□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Cnksr2Q80YA9 1032 aa11.99□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Ric3Q8BPM6 367 aa11.99□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Scube2Q9JJS0 997 aa11.99□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Ccnb3Q810T2 1396 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 77.2 ms