RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Mapk8ip2Q9ERE9 830 aa30.27■■■□□ 2.44
Ssbp1-201ENSMUST00000031971 Chic1Q8CBW7 227 aa29.77■■■□□ 2.36
Ssbp1-201ENSMUST00000031971 Phf23Q8BSN5 401 aa26.61■■□□□ 1.85
Ssbp1-201ENSMUST00000031971 Gab3Q8BSM5 595 aa25.17■■□□□ 1.62
Ssbp1-201ENSMUST00000031971 Plppr3Q7TPB0 716 aa24.87■■□□□ 1.57
Ssbp1-201ENSMUST00000031971 Senp3Q9EP97 568 aaKnown RBP24.02■■□□□ 1.44
Ssbp1-201ENSMUST00000031971 Fam163aQ8CAA5 168 aa22.98■■□□□ 1.27
Ssbp1-201ENSMUST00000031971 Kcna4Q61423 654 aa22.04■■□□□ 1.12
Ssbp1-201ENSMUST00000031971 Hoxd11P23813 323 aa21.49■■□□□ 1.03
Ssbp1-201ENSMUST00000031971 Trap1aP19473 224 aa21.23■□□□□ 0.99
Ssbp1-201ENSMUST00000031971 ArsiQ32KI9 573 aa21■□□□□ 0.95
Ssbp1-201ENSMUST00000031971 Znf219Q6IQX8 726 aa20.92■□□□□ 0.94
Ssbp1-201ENSMUST00000031971 Chrna2Q91X60 512 aa20.25■□□□□ 0.83
Ssbp1-201ENSMUST00000031971 Slc34a2Q9DBP0 697 aa20.19■□□□□ 0.82
Ssbp1-201ENSMUST00000031971 Rsph4aQ8BYM7 716 aa20.17■□□□□ 0.82
Ssbp1-201ENSMUST00000031971 GapdhsQ64467 440 aa20.11■□□□□ 0.81
Ssbp1-201ENSMUST00000031971 Dnajc5bQ9CQ94 199 aa19.95■□□□□ 0.78
Ssbp1-201ENSMUST00000031971 Rimbp2Q80U40 1072 aa19.92■□□□□ 0.78
Ssbp1-201ENSMUST00000031971 Akt1s1Q9D1F4 257 aa19.85■□□□□ 0.77
Ssbp1-201ENSMUST00000031971 Dmrt2Q8BG36 561 aa19.62■□□□□ 0.73
Ssbp1-201ENSMUST00000031971 Atf5O70191 283 aa19.03■□□□□ 0.64
Ssbp1-201ENSMUST00000031971 Hs6st3Q9QYK4 470 aa18.77■□□□□ 0.6
Ssbp1-201ENSMUST00000031971 Ppp4r2Q0VGB7 417 aa18.76■□□□□ 0.59
Ssbp1-201ENSMUST00000031971 Znf704Q9ERQ3 566 aa18.75■□□□□ 0.59
Ssbp1-201ENSMUST00000031971 Slc4a5E9Q3M5 1116 aa18.68■□□□□ 0.58
Ssbp1-201ENSMUST00000031971 Ppargc1bQ8VHJ7 1014 aa18.55■□□□□ 0.56
Ssbp1-201ENSMUST00000031971 Bach1P97302 739 aa18.5■□□□□ 0.55
Ssbp1-201ENSMUST00000031971 Sox12Q04890 314 aa18.45■□□□□ 0.54
Ssbp1-201ENSMUST00000031971 Slc4a1apE9PX68 744 aa18.31■□□□□ 0.52
Ssbp1-201ENSMUST00000031971 1700123L14RikQ3V2K7 440 aa17.93■□□□□ 0.46
Ssbp1-201ENSMUST00000031971 Cacnb1Q8R3Z5 597 aa17.92■□□□□ 0.46
Ssbp1-201ENSMUST00000031971 Grwd1Q810D6 446 aaKnown RBP17.88■□□□□ 0.45
Ssbp1-201ENSMUST00000031971 WdpcpQ8C456 722 aa17.87■□□□□ 0.45
Ssbp1-201ENSMUST00000031971 Egfem1Q8C088 590 aa17.86■□□□□ 0.45
Ssbp1-201ENSMUST00000031971 Zbtb7aO88939 569 aaKnown RBP17.72■□□□□ 0.43
Ssbp1-201ENSMUST00000031971 Ifnlr1Q8CGK5 535 aa17.59■□□□□ 0.41
Ssbp1-201ENSMUST00000031971 Znf703P0CL69 594 aa17.58■□□□□ 0.4
Ssbp1-201ENSMUST00000031971 Abcb7Q61102 752 aaKnown RBP17.45■□□□□ 0.38
Ssbp1-201ENSMUST00000031971 Ildr2B5TVM2 661 aa17.44■□□□□ 0.38
Ssbp1-201ENSMUST00000031971 G430095P16RikE9Q913 147 aa17.42■□□□□ 0.38
Ssbp1-201ENSMUST00000031971 Prr29B1ARI9 187 aa17.38■□□□□ 0.37
Ssbp1-201ENSMUST00000031971 Kcnn1Q9EQR3 537 aa17.33■□□□□ 0.36
Ssbp1-201ENSMUST00000031971 Rnf216P58283 853 aa17.26■□□□□ 0.35
Ssbp1-201ENSMUST00000031971 Gm35339A0A140LHH9 1649 aa17.25■□□□□ 0.35
Ssbp1-201ENSMUST00000031971 C1qtnf12Q8R2Z0 308 aa17.09■□□□□ 0.33
Ssbp1-201ENSMUST00000031971 NischQ80TM9 1593 aa17.09■□□□□ 0.33
Ssbp1-201ENSMUST00000031971 Nkx1-1G3UXB3 402 aa17.08■□□□□ 0.32
Ssbp1-201ENSMUST00000031971 Zbtb12Q9Z150 459 aa17.06■□□□□ 0.32
Ssbp1-201ENSMUST00000031971 Gtpbp6Q3U6U5 514 aa16.98■□□□□ 0.31
Ssbp1-201ENSMUST00000031971 Cdca7Q9D0M2 382 aa16.93■□□□□ 0.3
Ssbp1-201ENSMUST00000031971 Ms4a5Q810P8 197 aa16.78■□□□□ 0.28
Ssbp1-201ENSMUST00000031971 Pip4p2Q9CZX7 257 aa16.76■□□□□ 0.27
Ssbp1-201ENSMUST00000031971 Clcn6O35454 870 aa16.63■□□□□ 0.25
Ssbp1-201ENSMUST00000031971 Kank3Q9Z1P7 791 aa16.62■□□□□ 0.25
Ssbp1-201ENSMUST00000031971 Abcc9P70170 1546 aa16.59■□□□□ 0.25
Ssbp1-201ENSMUST00000031971 Abcc8B2RUS7 1588 aa16.53■□□□□ 0.24
Ssbp1-201ENSMUST00000031971 Pitpnm1O35954 1243 aa16.48■□□□□ 0.23
Ssbp1-201ENSMUST00000031971 Trim41Q5NCC3 630 aa16.43■□□□□ 0.22
Ssbp1-201ENSMUST00000031971 Riok3Q9DBU3 519 aaKnown RBP16.42■□□□□ 0.22
Ssbp1-201ENSMUST00000031971 Trim35Q8C006 501 aa16.38■□□□□ 0.21
Ssbp1-201ENSMUST00000031971 Nlrp6Q91WS2 869 aa16.34■□□□□ 0.21
Ssbp1-201ENSMUST00000031971 Fbln2P37889 1221 aa16.25■□□□□ 0.19
Ssbp1-201ENSMUST00000031971 Npm2Q80W85 207 aa16.16■□□□□ 0.18
Ssbp1-201ENSMUST00000031971 MyclP10166 368 aa16.14■□□□□ 0.17
Ssbp1-201ENSMUST00000031971 Npm3Q9CPP0 175 aaKnown RBP16.04■□□□□ 0.16
Ssbp1-201ENSMUST00000031971 Foxp4Q9DBY0 795 aaKnown RBP16.04■□□□□ 0.16
Ssbp1-201ENSMUST00000031971 Fam71e1A1L3C1 212 aa16■□□□□ 0.15
Ssbp1-201ENSMUST00000031971 ArntlQ9WTL8 632 aa15.91■□□□□ 0.14
Ssbp1-201ENSMUST00000031971 ScribQ80U72 1612 aa15.9■□□□□ 0.14
Ssbp1-201ENSMUST00000031971 MpndQ3TV65 487 aa15.86■□□□□ 0.13
Ssbp1-201ENSMUST00000031971 Skida1Q80YR3 822 aa15.86■□□□□ 0.13
Ssbp1-201ENSMUST00000031971 Pde4cQ3UEI1 686 aa15.72■□□□□ 0.11
Ssbp1-201ENSMUST00000031971 AcrbpQ3V140 540 aa15.7■□□□□ 0.1
Ssbp1-201ENSMUST00000031971 Evx2P49749 475 aa15.68■□□□□ 0.1
Ssbp1-201ENSMUST00000031971 Cadps2Q8BYR5 1297 aa15.67■□□□□ 0.1
Ssbp1-201ENSMUST00000031971 Dok7Q18PE0 504 aa15.65■□□□□ 0.1
Ssbp1-201ENSMUST00000031971 Nyap1Q6PFX7 833 aa15.64■□□□□ 0.09
Ssbp1-201ENSMUST00000031971 Prm3Q62100 101 aa15.6■□□□□ 0.09
Ssbp1-201ENSMUST00000031971 Styxl1Q9DAR2 321 aa15.57■□□□□ 0.08
Ssbp1-201ENSMUST00000031971 SnphQ80U23 495 aa15.46■□□□□ 0.07
Ssbp1-201ENSMUST00000031971 Jarid2Q62315 1234 aa15.36■□□□□ 0.05
Ssbp1-201ENSMUST00000031971 Kdm5dQ62240 1548 aa15.36■□□□□ 0.05
Ssbp1-201ENSMUST00000031971 Lrrc43Q3V0L5 667 aa15.32■□□□□ 0.04
Ssbp1-201ENSMUST00000031971 NacadQ5SWP3 1504 aa15.29■□□□□ 0.04
Ssbp1-201ENSMUST00000031971 Gjc2Q8BQU6 440 aa15.27■□□□□ 0.04
Ssbp1-201ENSMUST00000031971 Fxr2Q9WVR4 673 aaKnown RBP15.26■□□□□ 0.03
Ssbp1-201ENSMUST00000031971 Map3k10Q66L42 940 aa15.21■□□□□ 0.03
Ssbp1-201ENSMUST00000031971 Ppp1r37Q8BKR5 712 aa15.21■□□□□ 0.03
Ssbp1-201ENSMUST00000031971 Ehmt2Q9Z148 1263 aaKnown RBP15.18■□□□□ 0.02
Ssbp1-201ENSMUST00000031971 Dcaf1Q80TR8 1506 aa15.17■□□□□ 0.02
Ssbp1-201ENSMUST00000031971 Tshz2Q68FE9 1030 aa15.16■□□□□ 0.02
Ssbp1-201ENSMUST00000031971 Zranb1Q7M760 708 aa15.14■□□□□ 0.01
Ssbp1-201ENSMUST00000031971 Rtn4Q99P72 1162 aaKnown RBP15.11■□□□□ 0.01
Ssbp1-201ENSMUST00000031971 Sycp2Q9CUU3 1500 aa15.03■□□□□ -0
Ssbp1-201ENSMUST00000031971 Kiaa1522A2A7S8 1013 aa15□□□□□ -0.01
Ssbp1-201ENSMUST00000031971 Hnrnpul2Q00PI9 745 aaKnown RBP14.99□□□□□ -0.01
Ssbp1-201ENSMUST00000031971 Sra1Q80VJ2 232 aa14.99□□□□□ -0.01
Ssbp1-201ENSMUST00000031971 Znf710Q3U288 666 aa14.97□□□□□ -0.01
Ssbp1-201ENSMUST00000031971 Tcf3P15806 651 aa14.96□□□□□ -0.01
Ssbp1-201ENSMUST00000031971 Lhx8O35652 367 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 193.4 ms