RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 YDR391CQ04170 232 aa-1.11□□□□□ -2.59
snR56snR56 GVP36P40531 326 aaKnown RBP-1.12□□□□□ -2.59
snR56snR56 USE1P53146 245 aa-1.12□□□□□ -2.59
snR56snR56 PRM3Q08931 133 aa-1.12□□□□□ -2.59
snR56snR56 TSC3Q3E790 80 aa-1.12□□□□□ -2.59
snR56snR56 YER034WP40022 185 aaKnown RBP-1.13□□□□□ -2.59
snR56snR56 MDY2Q12285 212 aa-1.13□□□□□ -2.59
snR56snR56 TIM9O74700 87 aa-1.14□□□□□ -2.59
snR56snR56 COX2P00410 251 aa-1.14□□□□□ -2.59
snR56snR56 ATG22P25568 528 aa-1.14□□□□□ -2.59
snR56snR56 BFR1P38934 470 aaKnown RBP RIP-Chip data-1.14□□□□□ -2.59not detected
snR56snR56 HPA3P39979 161 aa-1.14□□□□□ -2.59
snR56snR56 YMD8Q03697 442 aa-1.14□□□□□ -2.59
snR56snR56 LPP1Q04396 274 aa-1.14□□□□□ -2.59
snR56snR56 CDC10P25342 322 aaKnown RBP-1.15□□□□□ -2.59
snR56snR56 MRPL28P36527 147 aa-1.15□□□□□ -2.59
snR56snR56 YDR209CQ03480 137 aa-1.15□□□□□ -2.59
snR56snR56 REX3Q12090 404 aa-1.15□□□□□ -2.59
snR56snR56 YKL075CP36083 450 aa-1.16□□□□□ -2.6
snR56snR56 POP4P38336 279 aa-1.16□□□□□ -2.6
snR56snR56 YHL037CP38733 133 aa-1.16□□□□□ -2.6
snR56snR56 MRP1P10662 321 aaKnown RBP-1.17□□□□□ -2.6
snR56snR56 YMR144WP40214 342 aaKnown RBP-1.17□□□□□ -2.6
snR56snR56 YPL073CP40323 161 aa-1.17□□□□□ -2.6
snR56snR56 TPM1P17536 199 aaKnown RBP-1.18□□□□□ -2.6
snR56snR56 UBC8P28263 218 aa-1.18□□□□□ -2.6
snR56snR56 YBR285WP38354 144 aa-1.18□□□□□ -2.6
snR56snR56 YLR413WQ06689 675 aa-1.19□□□□□ -2.6
snR56snR56 SNU23Q12368 194 aaPredicted RBP-1.19□□□□□ -2.6
snR56snR56 ADH6Q04894 360 aaKnown RBP-1.2□□□□□ -2.6
snR56snR56 YPR174CQ06616 221 aaPredicted RBP-1.2□□□□□ -2.6
snR56snR56 DOG2P38773 246 aa-1.21□□□□□ -2.6
snR56snR56 YAR1P46683 200 aa-1.21□□□□□ -2.6
snR56snR56 BNA7Q04066 261 aa-1.21□□□□□ -2.6
snR56snR56 YFL051CP43552 160 aa-1.22□□□□□ -2.6
snR56snR56 BTS1Q12051 335 aa-1.22□□□□□ -2.6
snR56snR56 DAL82P21705 255 aa-1.23□□□□□ -2.61
snR56snR56 YAR064WP39563 99 aa-1.23□□□□□ -2.61
snR56snR56 YLR126CQ12288 251 aa-1.23□□□□□ -2.61
snR56snR56 ODC2Q99297 307 aa-1.23□□□□□ -2.61
snR56snR56 AHT1P29589 182 aa-1.24□□□□□ -2.61
snR56snR56 RPB7P34087 171 aa-1.24□□□□□ -2.61
snR56snR56 YBR242WP38331 238 aa-1.24□□□□□ -2.61
snR56snR56 YML108WQ03759 105 aa-1.24□□□□□ -2.61
snR56snR56 CSM4Q08955 156 aa-1.24□□□□□ -2.61
snR56snR56 MCP1Q12106 302 aa-1.24□□□□□ -2.61
snR56snR56 FAS1P07149 2051 aaKnown RBP-1.24□□□□□ -2.61
snR56snR56 SRB4P32569 687 aa-1.25□□□□□ -2.61
snR56snR56 COX20Q04935 205 aa-1.25□□□□□ -2.61
snR56snR56 LSO2Q3E772 92 aaKnown RBP-1.25□□□□□ -2.61
snR56snR56 HFA1P32874 2273 aa-1.26□□□□□ -2.61
snR56snR56 SEN2P16658 377 aa-1.26□□□□□ -2.61
snR56snR56 DBP3P20447 523 aaKnown RBP-1.28□□□□□ -2.61
snR56snR56 SEC17P32602 292 aa-1.28□□□□□ -2.61
snR56snR56 GCN20P43535 752 aaKnown RBP-1.28□□□□□ -2.61
snR56snR56 YJR111CP47148 283 aaKnown RBP-1.28□□□□□ -2.61
snR56snR56 YJR149WP47177 404 aa-1.28□□□□□ -2.61
snR56snR56 POL30P15873 258 aaKnown RBP-1.29□□□□□ -2.62
snR56snR56 UPS3Q04006 179 aa-1.29□□□□□ -2.62
snR56snR56 YIL002W-AQ3E7Z5 69 aa-1.29□□□□□ -2.62
snR56snR56 MSF1P08425 469 aa-1.3□□□□□ -2.62
snR56snR56 DAL80P26343 269 aa-1.3□□□□□ -2.62
snR56snR56 YHL018WP38744 120 aaPredicted RBP-1.3□□□□□ -2.62
snR56snR56 DAD4P69851 72 aa-1.3□□□□□ -2.62
snR56snR56 MET31Q03081 177 aa-1.3□□□□□ -2.62
snR56snR56 YDR274CP87283 123 aa-1.31□□□□□ -2.62
snR56snR56 YMR226CQ05016 267 aaKnown RBP-1.31□□□□□ -2.62
snR56snR56 RPL27AP0C2H6 136 aaKnown RBP-1.32□□□□□ -2.62
snR56snR56 DCV1P43595 202 aa-1.32□□□□□ -2.62
snR56snR56 MCM22P47167 239 aa-1.32□□□□□ -2.62
snR56snR56 SDO1Q07953 250 aaKnown RBP-1.32□□□□□ -2.62
snR56snR56 FIT2Q08906 153 aa-1.32□□□□□ -2.62
snR56snR56 TDA8Q6B2U8 126 aa-1.32□□□□□ -2.62
snR56snR56 STF1P01098 86 aa-1.33□□□□□ -2.62
snR56snR56 LAP3Q01532 483 aaKnown RBP RIP-Chip data-1.33□□□□□ -2.62not detected
snR56snR56 TAO3P40468 2376 aa-1.33□□□□□ -2.62
snR56snR56 RPL24AP04449 155 aaKnown RBP-1.34□□□□□ -2.62
snR56snR56 SPO13P23624 291 aa-1.34□□□□□ -2.62
snR56snR56 UTP30P36144 274 aaKnown RBP-1.34□□□□□ -2.62
snR56snR56 ECM4P36156 370 aa-1.34□□□□□ -2.62
snR56snR56 NUP84P52891 726 aa-1.34□□□□□ -2.62
snR56snR56 MGA1P53050 456 aa-1.34□□□□□ -2.62
snR56snR56 EGD1Q02642 157 aaKnown RBP-1.34□□□□□ -2.62
snR56snR56 SKG1P36169 355 aa-1.35□□□□□ -2.63
snR56snR56 KRR1P25586 316 aaPredicted RBP-1.36□□□□□ -2.63
snR56snR56 MGM101P32787 269 aaKnown RBP-1.36□□□□□ -2.63
snR56snR56 MPC3P53311 146 aa-1.36□□□□□ -2.63
snR56snR56 FIT1Q04433 528 aa-1.36□□□□□ -2.63
snR56snR56 YPR013CQ12145 317 aa-1.36□□□□□ -2.63
snR56snR56 COX8P04039 78 aa-1.37□□□□□ -2.63
snR56snR56 FYV12Q08559 129 aa-1.37□□□□□ -2.63
snR56snR56 TVP23P38962 199 aa-1.38□□□□□ -2.63
snR56snR56 UBC12P52491 188 aa-1.38□□□□□ -2.63
snR56snR56 DRS2P39524 1355 aa-1.38□□□□□ -2.63
snR56snR56 TCP1P12612 559 aaKnown RBP-1.39□□□□□ -2.63
snR56snR56 HHY1P39982 102 aa-1.39□□□□□ -2.63
snR56snR56 PRM8P53174 237 aa-1.39□□□□□ -2.63
snR56snR56 PRP11Q07350 266 aaPredicted RBP-1.39□□□□□ -2.63
snR56snR56 YHR213W-BQ8TGK1 99 aa-1.39□□□□□ -2.63
snR56snR56 TAR1Q8TGM6 124 aa-1.39□□□□□ -2.63
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms