RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W FIS1P40515 155 aa0.31□□□□□ -2.36
SEC8YPR055W AGE2P40529 298 aa0.31□□□□□ -2.36
SEC8YPR055W YGR026WP53217 278 aa0.31□□□□□ -2.36
SEC8YPR055W YGR219WP53307 113 aa0.31□□□□□ -2.36
SEC8YPR055W YNR062CP53748 327 aa0.31□□□□□ -2.36
SEC8YPR055W YNL046WP53956 172 aa0.31□□□□□ -2.36
SEC8YPR055W YPR172WQ06608 200 aa0.31□□□□□ -2.36
SEC8YPR055W NIP7Q08962 181 aaKnown RBP0.31□□□□□ -2.36
SEC8YPR055W MSW1P04803 379 aa0.3□□□□□ -2.36
SEC8YPR055W DDI2P0CH63 225 aa0.3□□□□□ -2.36
SEC8YPR055W DDI3P0CH64 225 aa0.3□□□□□ -2.36
SEC8YPR055W YPT52P36018 234 aaKnown RBP0.3□□□□□ -2.36
SEC8YPR055W CAT5P41735 233 aa0.3□□□□□ -2.36
SEC8YPR055W YNL134CP53912 376 aaKnown RBP0.3□□□□□ -2.36
SEC8YPR055W SDO1Q07953 250 aaKnown RBP0.3□□□□□ -2.36
SEC8YPR055W YPL257WQ08974 193 aa0.3□□□□□ -2.36
SEC8YPR055W GRX2P17695 143 aaKnown RBP0.3□□□□□ -2.36
SEC8YPR055W YHR127WP38833 243 aaKnown RBP0.3□□□□□ -2.36
SEC8YPR055W BFR1P38934 470 aaKnown RBP RIP-Chip data0.3□□□□□ -2.36not detected
SEC8YPR055W TVP23P38962 199 aa0.3□□□□□ -2.36
SEC8YPR055W YAR068WP39564 161 aa0.3□□□□□ -2.36
SEC8YPR055W YAR1P46683 200 aa0.3□□□□□ -2.36
SEC8YPR055W FAR8Q05040 523 aa0.3□□□□□ -2.36
SEC8YPR055W MSH5Q12175 901 aa0.3□□□□□ -2.36
SEC8YPR055W RPL9AP05738 191 aaKnown RBP0.29□□□□□ -2.36
SEC8YPR055W MSF1P08425 469 aa0.29□□□□□ -2.36
SEC8YPR055W YPR170W-BP0C5R9 85 aa0.29□□□□□ -2.36
SEC8YPR055W FZO1P38297 855 aa0.29□□□□□ -2.36
SEC8YPR055W DSE2P38844 325 aa0.29□□□□□ -2.36
SEC8YPR055W BNA6P43619 295 aa0.29□□□□□ -2.36
SEC8YPR055W GPI8P49018 411 aa0.29□□□□□ -2.36
SEC8YPR055W RPL9BP51401 191 aaKnown RBP0.29□□□□□ -2.36
SEC8YPR055W SML1Q04964 104 aa0.29□□□□□ -2.36
SEC8YPR055W NEJ1Q06148 342 aa0.29□□□□□ -2.36
SEC8YPR055W ARR2Q06597 130 aa0.29□□□□□ -2.36
SEC8YPR055W HEM25Q07534 307 aa0.29□□□□□ -2.36
SEC8YPR055W MEU1Q07938 337 aaKnown RBP RIP-Chip data0.29□□□□□ -2.36not detected
SEC8YPR055W RRT8Q08219 342 aa0.29□□□□□ -2.36
SEC8YPR055W YCT1Q12235 531 aa0.29□□□□□ -2.36
SEC8YPR055W DCN1Q12395 269 aa0.29□□□□□ -2.36
SEC8YPR055W SNF8Q12483 233 aa0.29□□□□□ -2.36
SEC8YPR055W RSF2P46974 1380 aa0.29□□□□□ -2.36
SEC8YPR055W PET9P18239 318 aaKnown RBP0.29□□□□□ -2.36
SEC8YPR055W RNA15P25299 296 aaPredicted RBP0.29□□□□□ -2.36
SEC8YPR055W RPA43P46669 326 aa0.29□□□□□ -2.36
SEC8YPR055W YJR079WP47126 109 aa0.29□□□□□ -2.36
SEC8YPR055W ERG25P53045 309 aa0.29□□□□□ -2.36
SEC8YPR055W SEI1Q06058 285 aa0.29□□□□□ -2.36
SEC8YPR055W HTL1Q9URQ5 78 aa0.29□□□□□ -2.36
SEC8YPR055W RPL2AP0CX45 254 aaKnown RBP0.29□□□□□ -2.36
SEC8YPR055W RPL2BP0CX46 254 aaKnown RBP0.29□□□□□ -2.36
SEC8YPR055W SNA3P14359 133 aa0.29□□□□□ -2.36
SEC8YPR055W MDH2P22133 377 aa0.29□□□□□ -2.36
SEC8YPR055W DOG1P38774 246 aa0.29□□□□□ -2.36
SEC8YPR055W THO1P40040 218 aaKnown RBP0.29□□□□□ -2.36
SEC8YPR055W RTR1P40084 226 aaPredicted RBP0.29□□□□□ -2.36
SEC8YPR055W YKE4P40544 346 aa0.29□□□□□ -2.36
SEC8YPR055W YNR077CP53758 84 aa0.29□□□□□ -2.36
SEC8YPR055W DAD3P69850 94 aa0.29□□□□□ -2.36
SEC8YPR055W YMR279CQ03263 540 aa0.29□□□□□ -2.36
SEC8YPR055W KAP95Q06142 861 aaKnown RBP0.29□□□□□ -2.36
SEC8YPR055W YLR162WQ06235 118 aa0.29□□□□□ -2.36
SEC8YPR055W RRP36Q12481 300 aaPredicted RBP0.29□□□□□ -2.36
SEC8YPR055W SRB8P25648 1427 aa0.28□□□□□ -2.36
SEC8YPR055W QCR8P08525 94 aa0.28□□□□□ -2.36
SEC8YPR055W RSR1P13856 272 aa0.28□□□□□ -2.36
SEC8YPR055W FPR1P20081 114 aaKnown RBP0.28□□□□□ -2.36
SEC8YPR055W ECM33P38248 429 aaKnown RBP0.28□□□□□ -2.36
SEC8YPR055W YAP3P38749 330 aa0.28□□□□□ -2.36
SEC8YPR055W YMR144WP40214 342 aaKnown RBP0.28□□□□□ -2.36
SEC8YPR055W TRM9P49957 279 aa0.28□□□□□ -2.36
SEC8YPR055W YDR476CQ03362 224 aa0.28□□□□□ -2.36
SEC8YPR055W TRM12Q04235 462 aa0.28□□□□□ -2.36
SEC8YPR055W SRB4P32569 687 aa0.28□□□□□ -2.37
SEC8YPR055W SKG1P36169 355 aa0.28□□□□□ -2.37
SEC8YPR055W OPY1P38271 328 aa0.28□□□□□ -2.37
SEC8YPR055W AST2P39945 430 aaKnown RBP0.28□□□□□ -2.37
SEC8YPR055W LAP3Q01532 483 aaKnown RBP RIP-Chip data0.28□□□□□ -2.37not detected
SEC8YPR055W SNU23Q12368 194 aaPredicted RBP0.28□□□□□ -2.37
SEC8YPR055W ADE6P38972 1358 aaKnown RBP0.28□□□□□ -2.37
SEC8YPR055W YUH1P35127 236 aa0.27□□□□□ -2.37
SEC8YPR055W RIB1P38066 345 aa0.27□□□□□ -2.37
SEC8YPR055W YBR063CP38083 404 aa0.27□□□□□ -2.37
SEC8YPR055W YBR220CP38318 560 aa0.27□□□□□ -2.37
SEC8YPR055W RPF1P38805 295 aaKnown RBP0.27□□□□□ -2.37
SEC8YPR055W YER135CP40082 130 aa0.27□□□□□ -2.37
SEC8YPR055W RPL33BP41056 107 aaKnown RBP0.27□□□□□ -2.37
SEC8YPR055W MRPL50P53724 139 aa0.27□□□□□ -2.37
SEC8YPR055W CDC8P00572 216 aa0.27□□□□□ -2.37
SEC8YPR055W RPL28P02406 149 aaKnown RBP0.27□□□□□ -2.37
SEC8YPR055W ERD2P18414 219 aa0.27□□□□□ -2.37
SEC8YPR055W LDB7P38210 180 aa0.27□□□□□ -2.37
SEC8YPR055W HOC1P47124 396 aa0.27□□□□□ -2.37
SEC8YPR055W YML096WQ04489 525 aa0.27□□□□□ -2.37
SEC8YPR055W YGL010WP25338 174 aa0.27□□□□□ -2.37
SEC8YPR055W ECM4P36156 370 aa0.27□□□□□ -2.37
SEC8YPR055W AVT2P39981 480 aa0.27□□□□□ -2.37
SEC8YPR055W YRB2P40517 327 aa0.27□□□□□ -2.37
SEC8YPR055W EAF6P47128 113 aa0.27□□□□□ -2.37
SEC8YPR055W AIF1P52923 378 aa0.27□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 86.7 ms