RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABF1	YKL112W	YNR040W	P53736	256 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YNL092W	P53934	400 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	HHT1	P61830	136 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YMR087W	Q04299	284 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	ECI1	Q05871	280 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	SNT309	Q06091	175 aa	Predicted RBP	4.12	□□□□□ -1.75
ABF1	YKL112W	FDH1	Q08911	376 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YER190C-B	P0CX94	160 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YEL077W-A	P0CX95	160 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YGR296C-B	P0CX96	160 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YPL283W-B	P0CX97	160 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YPR204C-A	P0CX98	160 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	LSB5	P25369	354 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	POP5	P28005	173 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	COQ2	P32378	372 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	NUP2	P32499	720 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	MRPL6	P32904	214 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YKL187C	P34231	750 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YBR053C	P38235	358 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	TRS20	P38334	175 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YHR035W	P38769	630 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YHR130C	P38834	111 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	PHM8	P40025	321 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	GWT1	P47026	490 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	YJR012C	P47087	207 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	OST3	P48439	350 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	USE1	P53146	245 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	GAL83	Q04739	417 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	PEX11	Q12462	236 aa		4.12	□□□□□ -1.75
ABF1	YKL112W	COX5B	P00425	151 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	CDC6	P09119	513 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	FUN14	P18411	198 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	CUE1	P38428	203 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	TIR3	P40552	269 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	LCB3	P47013	409 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	SNN1	P48232	102 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	BUL1	P48524	976 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	KTR5	P53966	522 aa	Predicted RBP	4.11	□□□□□ -1.75
ABF1	YKL112W	YNL010W	P53981	241 aa	Known RBP	4.11	□□□□□ -1.75
ABF1	YKL112W	ASI3	P53983	676 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	NUP53	Q03790	475 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	LIP2	Q06005	328 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	SLD7	Q08457	257 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	YLR118C	Q12354	227 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	TFC7	Q12415	435 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	ISD11	Q6Q560	94 aa		4.11	□□□□□ -1.75
ABF1	YKL112W	DET1	Q99288	334 aa	Known RBP	4.11	□□□□□ -1.75
ABF1	YKL112W	TRX3	P25372	127 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	HIS7	P33734	552 aa	Known RBP	4.1	□□□□□ -1.75
ABF1	YKL112W	SSS1	P35179	80 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	PEX7	P39108	375 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	XPT1	P47165	209 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	MDM34	P53083	459 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	YPL067C	Q02754	198 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	YDR209C	Q03480	137 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	ICT1	Q12385	394 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	SEC16	P48415	2195 aa	Known RBP	4.1	□□□□□ -1.75
ABF1	YKL112W	RPS31	P05759	152 aa	Known RBP	4.1	□□□□□ -1.75
ABF1	YKL112W	TPK3	P05986	398 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	BGL2	P15703	313 aa	Known RBP	4.1	□□□□□ -1.75
ABF1	YKL112W	PRE2	P30656	287 aa	Known RBP	4.1	□□□□□ -1.75
ABF1	YKL112W	OAC1	P32332	324 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	TOA2	P32774	122 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	PTM1	P32857	523 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	YBR096W	P38256	230 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	RPS10B	P46784	105 aa	Known RBP	4.1	□□□□□ -1.75
ABF1	YKL112W	DAN1	P47178	298 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	YGR151C	P53287	111 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	TIM13	P53299	105 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	CPR8	P53728	308 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	YNL095C	P53932	642 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	GPI15	P53961	229 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	YLR152C	P54072	576 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	YMR178W	Q03219	274 aa	Known RBP	4.1	□□□□□ -1.75
ABF1	YKL112W	HPT1	Q04178	221 aa	Known RBP	4.1	□□□□□ -1.75
ABF1	YKL112W	VBA1	Q04301	562 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	SEN15	Q04675	128 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	THP1	Q08231	455 aa		4.1	□□□□□ -1.75
ABF1	YKL112W	RDL2	Q08742	149 aa	Known RBP	4.1	□□□□□ -1.75
ABF1	YKL112W	AAC1	P04710	309 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	TIR1	P10863	254 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	BAR1	P12630	587 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	PHO85	P17157	305 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	MUD1	P32605	298 aa	Known RBP	4.09	□□□□□ -1.75
ABF1	YKL112W	YBR144C	P34215	104 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	MRPL28	P36527	147 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	TRR2	P38816	342 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	SNM1	P40993	198 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	TIS11	P47977	285 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	PRM8	P53174	237 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	SLM2	P53955	656 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	COF1	Q03048	143 aa	Known RBP	4.09	□□□□□ -1.75
ABF1	YKL112W	UPS3	Q04006	179 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	YDR415C	Q04033	374 aa	Predicted RBP	4.09	□□□□□ -1.75
ABF1	YKL112W	YPR114W	Q06107	315 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	PBP4	Q07362	185 aa	Known RBP	4.09	□□□□□ -1.75
ABF1	YKL112W	YOL024W	Q08172	172 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	PST1	Q12355	444 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	TY1A-DR3	Q12441	440 aa		4.09	□□□□□ -1.75
ABF1	YKL112W	LRE1	P25579	583 aa	Known RBP	4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms