RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W PRM10P42946 383 aa1.36□□□□□ -2.19
PEP8YJL053W GCN20P43535 752 aaKnown RBP1.36□□□□□ -2.19
PEP8YJL053W CYT2Q00873 224 aa1.36□□□□□ -2.19
PEP8YJL053W UFD4P33202 1483 aa1.36□□□□□ -2.19
PEP8YJL053W SSK2P53599 1579 aa1.35□□□□□ -2.19
PEP8YJL053W ATG2P53855 1592 aa1.35□□□□□ -2.19
PEP8YJL053W YBR121C-AP0C5L4 52 aa1.35□□□□□ -2.19
PEP8YJL053W MEI4P29467 408 aa1.35□□□□□ -2.19
PEP8YJL053W SKG1P36169 355 aa1.35□□□□□ -2.19
PEP8YJL053W POP4P38336 279 aa1.35□□□□□ -2.19
PEP8YJL053W SVP26P38869 228 aa1.35□□□□□ -2.19
PEP8YJL053W LSM4P40070 187 aaKnown RBP1.35□□□□□ -2.19
PEP8YJL053W PGD1P40356 397 aa1.35□□□□□ -2.19
PEP8YJL053W FAR7P43592 221 aa1.35□□□□□ -2.19
PEP8YJL053W BXI1P48558 297 aa1.35□□□□□ -2.19
PEP8YJL053W AIF1P52923 378 aa1.35□□□□□ -2.19
PEP8YJL053W YNL010WP53981 241 aaKnown RBP1.35□□□□□ -2.19
PEP8YJL053W SNZ1Q03148 297 aa1.35□□□□□ -2.19
PEP8YJL053W YDR248CQ03786 193 aa1.35□□□□□ -2.19
PEP8YJL053W LPP1Q04396 274 aa1.35□□□□□ -2.19
PEP8YJL053W JLP1Q12358 412 aa1.35□□□□□ -2.19
PEP8YJL053W PSF1Q12488 208 aa1.35□□□□□ -2.19
PEP8YJL053W NCB2Q92317 146 aa1.35□□□□□ -2.19
PEP8YJL053W CHD1P32657 1468 aa1.35□□□□□ -2.19
PEP8YJL053W ESC1Q03661 1658 aaKnown RBP1.35□□□□□ -2.19
PEP8YJL053W TOP2P06786 1428 aaKnown RBP1.34□□□□□ -2.19
PEP8YJL053W CDC28P00546 298 aaKnown RBP1.34□□□□□ -2.19
PEP8YJL053W RAS2P01120 322 aaKnown RBP1.34□□□□□ -2.19
PEP8YJL053W PET9P18239 318 aaKnown RBP1.34□□□□□ -2.19
PEP8YJL053W STE18P18852 110 aa1.34□□□□□ -2.19
PEP8YJL053W MRPS28P21771 286 aa1.34□□□□□ -2.19
PEP8YJL053W PBN1P25580 416 aa1.34□□□□□ -2.19
PEP8YJL053W APS1P35181 156 aa1.34□□□□□ -2.19
PEP8YJL053W IRC22P40006 225 aa1.34□□□□□ -2.19
PEP8YJL053W ICE2P40499 491 aa1.34□□□□□ -2.19
PEP8YJL053W MSS2P40990 351 aa1.34□□□□□ -2.19
PEP8YJL053W NUP57P48837 541 aa1.34□□□□□ -2.19
PEP8YJL053W YNR062CP53748 327 aa1.34□□□□□ -2.19
PEP8YJL053W SCC2Q04002 1493 aa1.34□□□□□ -2.19
PEP8YJL053W TRM732Q03496 1420 aa1.33□□□□□ -2.2
PEP8YJL053W SMC4Q12267 1418 aa1.33□□□□□ -2.2
PEP8YJL053W YHR139C-AO13536 103 aa1.33□□□□□ -2.2
PEP8YJL053W DDI2P0CH63 225 aa1.33□□□□□ -2.2
PEP8YJL053W DDI3P0CH64 225 aa1.33□□□□□ -2.2
PEP8YJL053W COQ1P18900 473 aa1.33□□□□□ -2.2
PEP8YJL053W MRPL28P36527 147 aa1.33□□□□□ -2.2
PEP8YJL053W URA8P38627 578 aaPredicted RBP1.33□□□□□ -2.2
PEP8YJL053W ERG28P40030 148 aa1.33□□□□□ -2.2
PEP8YJL053W AGE2P40529 298 aa1.33□□□□□ -2.2
PEP8YJL053W ALG13P53178 202 aa1.33□□□□□ -2.2
PEP8YJL053W BUD25P85052 153 aa1.33□□□□□ -2.2
PEP8YJL053W YKL183C-AQ3E765 70 aa1.33□□□□□ -2.2
PEP8YJL053W IRA1P18963 3092 aa1.32□□□□□ -2.2
PEP8YJL053W MMS22Q06164 1454 aa1.32□□□□□ -2.2
PEP8YJL053W REP2P03872 296 aa1.32□□□□□ -2.2
PEP8YJL053W DBF2P22204 572 aa1.32□□□□□ -2.2
PEP8YJL053W MGM101P32787 269 aaKnown RBP1.32□□□□□ -2.2
PEP8YJL053W SRY1P36007 326 aa1.32□□□□□ -2.2
PEP8YJL053W RTC3P38804 111 aaPredicted RBP1.32□□□□□ -2.2
PEP8YJL053W RMD6P39975 231 aa1.32□□□□□ -2.2
PEP8YJL053W AVT2P39981 480 aa1.32□□□□□ -2.2
PEP8YJL053W TIR3P40552 269 aa1.32□□□□□ -2.2
PEP8YJL053W ADO1P47143 340 aaKnown RBP1.32□□□□□ -2.2
PEP8YJL053W PGA2P53903 129 aa1.32□□□□□ -2.2
PEP8YJL053W BNA7Q04066 261 aa1.32□□□□□ -2.2
PEP8YJL053W TRM12Q04235 462 aa1.32□□□□□ -2.2
PEP8YJL053W TSC3Q3E790 80 aa1.32□□□□□ -2.2
PEP8YJL053W FMP27Q06179 2628 aa1.32□□□□□ -2.2
PEP8YJL053W SPP41P38904 1435 aa1.32□□□□□ -2.2
PEP8YJL053W POL1P13382 1468 aa1.31□□□□□ -2.2
PEP8YJL053W CDC7P06243 507 aa1.31□□□□□ -2.2
PEP8YJL053W YLR156WP0CE96 114 aa1.31□□□□□ -2.2
PEP8YJL053W YLR159WP0CE97 114 aa1.31□□□□□ -2.2
PEP8YJL053W YLR161WP0CE98 114 aa1.31□□□□□ -2.2
PEP8YJL053W YOL162WP0CF19 215 aa1.31□□□□□ -2.2
PEP8YJL053W NTG1P31378 399 aa1.31□□□□□ -2.2
PEP8YJL053W PRP18P33411 251 aaPredicted RBP1.31□□□□□ -2.2
PEP8YJL053W CBT1P36038 271 aaPredicted RBP1.31□□□□□ -2.2
PEP8YJL053W AST2P39945 430 aaKnown RBP1.31□□□□□ -2.2
PEP8YJL053W YNL194CP40169 301 aa1.31□□□□□ -2.2
PEP8YJL053W MGA1P53050 456 aa1.31□□□□□ -2.2
PEP8YJL053W GAS3Q03655 524 aa1.31□□□□□ -2.2
PEP8YJL053W RNH1Q04740 348 aa1.31□□□□□ -2.2
PEP8YJL053W TDA8Q6B2U8 126 aa1.31□□□□□ -2.2
PEP8YJL053W TSC11P40061 1430 aa1.31□□□□□ -2.2
PEP8YJL053W YOR1P53049 1477 aa1.31□□□□□ -2.2
PEP8YJL053W IDH1P28834 360 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
PEP8YJL053W TCA17P32613 152 aa1.3□□□□□ -2.2
PEP8YJL053W FZF1P32805 299 aa1.3□□□□□ -2.2
PEP8YJL053W SNC2P33328 115 aa1.3□□□□□ -2.2
PEP8YJL053W PRX1P34227 261 aaKnown RBP1.3□□□□□ -2.2
PEP8YJL053W YET1P35723 206 aa1.3□□□□□ -2.2
PEP8YJL053W UMP1P38293 148 aa1.3□□□□□ -2.2
PEP8YJL053W YNL217WP40152 326 aa1.3□□□□□ -2.2
PEP8YJL053W IRC18P47056 224 aa1.3□□□□□ -2.2
PEP8YJL053W RAD17P48581 401 aa1.3□□□□□ -2.2
PEP8YJL053W SWP1Q02795 286 aa1.3□□□□□ -2.2
PEP8YJL053W SPG3Q04398 127 aaPredicted RBP1.3□□□□□ -2.2
PEP8YJL053W SML1Q04964 104 aa1.3□□□□□ -2.2
PEP8YJL053W MDN1Q12019 4910 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms