RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W TY2B-OR1Q12113 1770 aa1.85□□□□□ -2.11
RPN9YDR427W TY2B-DR1Q12472 1770 aa1.85□□□□□ -2.11
RPN9YDR427W TY2B-OR2Q12501 1770 aa1.85□□□□□ -2.11
RPN9YDR427W RPL28P02406 149 aaKnown RBP1.85□□□□□ -2.11
RPN9YDR427W REP2P03872 296 aa1.85□□□□□ -2.11
RPN9YDR427W DDI2P0CH63 225 aa1.85□□□□□ -2.11
RPN9YDR427W DDI3P0CH64 225 aa1.85□□□□□ -2.11
RPN9YDR427W COQ1P18900 473 aa1.85□□□□□ -2.11
RPN9YDR427W DBF2P22204 572 aa1.85□□□□□ -2.11
RPN9YDR427W PRX1P34227 261 aaKnown RBP1.85□□□□□ -2.11
RPN9YDR427W BMT5P40493 336 aa1.85□□□□□ -2.11
RPN9YDR427W FAR7P43592 221 aa1.85□□□□□ -2.11
RPN9YDR427W BXI1P48558 297 aa1.85□□□□□ -2.11
RPN9YDR427W ERG25P53045 309 aa1.85□□□□□ -2.11
RPN9YDR427W YDR248CQ03786 193 aa1.85□□□□□ -2.11
RPN9YDR427W CDC33P07260 213 aaKnown RBP1.84□□□□□ -2.11
RPN9YDR427W MDH2P22133 377 aa1.84□□□□□ -2.11
RPN9YDR427W MEI4P29467 408 aa1.84□□□□□ -2.11
RPN9YDR427W CBT1P36038 271 aaPredicted RBP1.84□□□□□ -2.11
RPN9YDR427W SIP3P38717 1229 aa1.84□□□□□ -2.11
RPN9YDR427W YNL194CP40169 301 aa1.84□□□□□ -2.11
RPN9YDR427W RAD17P48581 401 aa1.84□□□□□ -2.11
RPN9YDR427W PRM8P53174 237 aa1.84□□□□□ -2.11
RPN9YDR427W TY1B-DR3Q99231 1755 aa1.84□□□□□ -2.12
RPN9YDR427W TY2B-BQ12491 1770 aa1.83□□□□□ -2.12
RPN9YDR427W YDR157WA0A023PZE8 133 aa1.83□□□□□ -2.12
RPN9YDR427W STE18P18852 110 aa1.83□□□□□ -2.12
RPN9YDR427W ATG22P25568 528 aa1.83□□□□□ -2.12
RPN9YDR427W TCA17P32613 152 aa1.83□□□□□ -2.12
RPN9YDR427W PRP18P33411 251 aaPredicted RBP1.83□□□□□ -2.12
RPN9YDR427W APS1P35181 156 aa1.83□□□□□ -2.12
RPN9YDR427W POP4P38336 279 aa1.83□□□□□ -2.12
RPN9YDR427W DSE2P38844 325 aa1.83□□□□□ -2.12
RPN9YDR427W ADO1P47143 340 aaKnown RBP1.83□□□□□ -2.12
RPN9YDR427W CWC23P52868 283 aaPredicted RBP1.83□□□□□ -2.12
RPN9YDR427W PGA2P53903 129 aa1.83□□□□□ -2.12
RPN9YDR427W SPG3Q04398 127 aaPredicted RBP1.83□□□□□ -2.12
RPN9YDR427W JLP1Q12358 412 aa1.83□□□□□ -2.12
RPN9YDR427W TY1B-BRQ12193 1756 aa1.82□□□□□ -2.12
RPN9YDR427W TY1B-GR3Q12316 1755 aa1.82□□□□□ -2.12
RPN9YDR427W TY1B-ORQ92393 1755 aa1.82□□□□□ -2.12
RPN9YDR427W YLR156WP0CE96 114 aa1.82□□□□□ -2.12
RPN9YDR427W YLR159WP0CE97 114 aa1.82□□□□□ -2.12
RPN9YDR427W YLR161WP0CE98 114 aa1.82□□□□□ -2.12
RPN9YDR427W PET9P18239 318 aaKnown RBP1.82□□□□□ -2.12
RPN9YDR427W SVP26P38869 228 aa1.82□□□□□ -2.12
RPN9YDR427W ICE2P40499 491 aa1.82□□□□□ -2.12
RPN9YDR427W RPL33BP41056 107 aaKnown RBP1.82□□□□□ -2.12
RPN9YDR427W GIS3Q12418 502 aa1.82□□□□□ -2.12
RPN9YDR427W TDA8Q6B2U8 126 aa1.82□□□□□ -2.12
RPN9YDR427W BUD4P47136 1447 aa1.82□□□□□ -2.12
RPN9YDR427W TY1B-HO13535 1793 aa1.81□□□□□ -2.12
RPN9YDR427W TY1B-DR5P0C2I2 1755 aa1.81□□□□□ -2.12
RPN9YDR427W TY1B-DR6P0C2I3 1755 aa1.81□□□□□ -2.12
RPN9YDR427W TY1B-LR2P0C2I5 1755 aa1.81□□□□□ -2.12
RPN9YDR427W TY1B-LR3P0C2I6 1755 aaKnown RBP1.81□□□□□ -2.12
RPN9YDR427W TY1B-PR1P0C2I9 1755 aaKnown RBP1.81□□□□□ -2.12
RPN9YDR427W TY1B-PR2P0C2J0 1756 aa1.81□□□□□ -2.12
RPN9YDR427W TY1B-PR3P0C2J1 1755 aaKnown RBP1.81□□□□□ -2.12
RPN9YDR427W TY1B-JR1P47098 1755 aa1.81□□□□□ -2.12
RPN9YDR427W TY1B-ML2Q03434 1755 aaKnown RBP1.81□□□□□ -2.12
RPN9YDR427W TY1B-ER1Q03612 1755 aa1.81□□□□□ -2.12
RPN9YDR427W TY1B-ML1Q04711 1755 aaKnown RBP1.81□□□□□ -2.12
RPN9YDR427W TY1B-GR2Q12269 1755 aa1.81□□□□□ -2.12
RPN9YDR427W TY1B-OLQ12273 1755 aa1.81□□□□□ -2.12
RPN9YDR427W TY1B-PLQ12414 1755 aaKnown RBP1.81□□□□□ -2.12
RPN9YDR427W SEC17P32602 292 aa1.81□□□□□ -2.12
RPN9YDR427W PGD1P40356 397 aa1.81□□□□□ -2.12
RPN9YDR427W IRC18P47056 224 aa1.81□□□□□ -2.12
RPN9YDR427W AIF1P52923 378 aa1.81□□□□□ -2.12
RPN9YDR427W SNZ1Q03148 297 aa1.81□□□□□ -2.12
RPN9YDR427W MYO2P19524 1574 aaKnown RBP1.81□□□□□ -2.12
RPN9YDR427W SEC4P07560 215 aaKnown RBP1.8□□□□□ -2.12
RPN9YDR427W AVT2P39981 480 aa1.8□□□□□ -2.12
RPN9YDR427W AGE2P40529 298 aa1.8□□□□□ -2.12
RPN9YDR427W TIR3P40552 269 aa1.8□□□□□ -2.12
RPN9YDR427W PDR17P53844 350 aa1.8□□□□□ -2.12
RPN9YDR427W GAS3Q03655 524 aa1.8□□□□□ -2.12
RPN9YDR427W ESC1Q03661 1658 aaKnown RBP1.8□□□□□ -2.12
RPN9YDR427W GCN3P14741 305 aa1.79□□□□□ -2.12
RPN9YDR427W TAF14P35189 244 aa1.79□□□□□ -2.12
RPN9YDR427W MRPL28P36527 147 aa1.79□□□□□ -2.12
RPN9YDR427W BOL2P53082 120 aa1.79□□□□□ -2.12
RPN9YDR427W PET191Q02772 108 aa1.79□□□□□ -2.12
RPN9YDR427W SWP1Q02795 286 aa1.79□□□□□ -2.12
RPN9YDR427W BNA7Q04066 261 aa1.79□□□□□ -2.12
RPN9YDR427W MCP1Q12106 302 aa1.79□□□□□ -2.12
RPN9YDR427W ECM5Q03214 1411 aa1.79□□□□□ -2.12
RPN9YDR427W SCC2Q04002 1493 aa1.78□□□□□ -2.12
RPN9YDR427W TAF2P23255 1407 aa1.78□□□□□ -2.12
RPN9YDR427W RPL27BP0C2H7 136 aaKnown RBP1.78□□□□□ -2.12
RPN9YDR427W RPB4P20433 221 aaPredicted RBP1.78□□□□□ -2.12
RPN9YDR427W MRPS28P21771 286 aa1.78□□□□□ -2.12
RPN9YDR427W IDH1P28834 360 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
RPN9YDR427W NTG1P31378 399 aa1.78□□□□□ -2.12
RPN9YDR427W UTP30P36144 274 aaKnown RBP1.78□□□□□ -2.12
RPN9YDR427W MRPL17P36528 281 aa1.78□□□□□ -2.12
RPN9YDR427W VTC1P40046 129 aaRIP-Chip data1.78□□□□□ -2.12not detected
RPN9YDR427W YRB2P40517 327 aa1.78□□□□□ -2.12
RPN9YDR427W DOC1P53068 250 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms