RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C SYC1Q08553 188 aaPredicted RBP3.89□□□□□ -1.79
NUP42YDR192C RDL2Q08742 149 aaKnown RBP3.89□□□□□ -1.79
NUP42YDR192C EAF3Q12432 401 aa3.89□□□□□ -1.79
NUP42YDR192C CSF1Q12150 2958 aa3.88□□□□□ -1.79
NUP42YDR192C YAL064W-BO13512 126 aa3.88□□□□□ -1.79
NUP42YDR192C CYC3P06182 269 aa3.88□□□□□ -1.79
NUP42YDR192C PET54P10834 293 aa3.88□□□□□ -1.79
NUP42YDR192C SAR1P20606 190 aaKnown RBP3.88□□□□□ -1.79
NUP42YDR192C MXR2P25566 168 aa3.88□□□□□ -1.79
NUP42YDR192C YCR102CP25608 368 aa3.88□□□□□ -1.79
NUP42YDR192C SNC2P33328 115 aa3.88□□□□□ -1.79
NUP42YDR192C YKL063CP35725 167 aa3.88□□□□□ -1.79
NUP42YDR192C HPA3P39979 161 aa3.88□□□□□ -1.79
NUP42YDR192C PCL7P40186 285 aa3.88□□□□□ -1.79
NUP42YDR192C RFC4P40339 323 aaKnown RBP3.88□□□□□ -1.79
NUP42YDR192C MNN5P46982 586 aa3.88□□□□□ -1.79
NUP42YDR192C LSM1P47017 172 aaKnown RBP3.88□□□□□ -1.79
NUP42YDR192C CTF19Q02732 369 aa3.88□□□□□ -1.79
NUP42YDR192C YPR147CQ06522 304 aaKnown RBP3.88□□□□□ -1.79
NUP42YDR192C IRC25Q07951 179 aa3.88□□□□□ -1.79
NUP42YDR192C YOR376WQ08900 122 aa3.88□□□□□ -1.79
NUP42YDR192C GRE1Q08969 168 aa3.88□□□□□ -1.79
NUP42YDR192C YOR343CQ12484 108 aa3.88□□□□□ -1.79
NUP42YDR192C SPS2P08459 502 aa3.87□□□□□ -1.79
NUP42YDR192C YFR010W-AP0C5N0 62 aa3.87□□□□□ -1.79
NUP42YDR192C RPS18AP0CX55 146 aaKnown RBP3.87□□□□□ -1.79
NUP42YDR192C RPS18BP0CX56 146 aaPredicted RBP3.87□□□□□ -1.79
NUP42YDR192C MEK1P24719 497 aaPredicted RBP3.87□□□□□ -1.79
NUP42YDR192C ATG22P25568 528 aa3.87□□□□□ -1.79
NUP42YDR192C LDB16P25587 256 aa3.87□□□□□ -1.79
NUP42YDR192C RFA3P26755 122 aaKnown RBP3.87□□□□□ -1.79
NUP42YDR192C NAM9P27929 486 aa3.87□□□□□ -1.79
NUP42YDR192C ERG9P29704 444 aa3.87□□□□□ -1.79
NUP42YDR192C ZRT3P34240 503 aa3.87□□□□□ -1.79
NUP42YDR192C SDS24P38314 527 aa3.87□□□□□ -1.79
NUP42YDR192C BFR1P38934 470 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
NUP42YDR192C LOH1P47055 219 aa3.87□□□□□ -1.79
NUP42YDR192C ERV29P53337 310 aa3.87□□□□□ -1.79
NUP42YDR192C HNT1Q04344 158 aaKnown RBP3.87□□□□□ -1.79
NUP42YDR192C USB1Q12208 290 aaKnown RBP3.87□□□□□ -1.79
NUP42YDR192C JID1Q12350 301 aa3.87□□□□□ -1.79
NUP42YDR192C CDC36P06100 191 aaPredicted RBP3.86□□□□□ -1.79
NUP42YDR192C CTA1P15202 515 aa3.86□□□□□ -1.79
NUP42YDR192C MSK1P32048 576 aa3.86□□□□□ -1.79
NUP42YDR192C HSP150P32478 413 aa3.86□□□□□ -1.79
NUP42YDR192C FRM2P37261 193 aa3.86□□□□□ -1.79
NUP42YDR192C PEX32P38292 413 aa3.86□□□□□ -1.79
NUP42YDR192C SSH1P38353 490 aaKnown RBP3.86□□□□□ -1.79
NUP42YDR192C GRE3P38715 327 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
NUP42YDR192C AIM24P47127 394 aa3.86□□□□□ -1.79
NUP42YDR192C DOC1P53068 250 aa3.86□□□□□ -1.79
NUP42YDR192C MRH4P53166 561 aa3.86□□□□□ -1.79
NUP42YDR192C SAY1P53324 424 aa3.86□□□□□ -1.79
NUP42YDR192C MPA43P53583 542 aaPredicted RBP3.86□□□□□ -1.79
NUP42YDR192C PET191Q02772 108 aa3.86□□□□□ -1.79
NUP42YDR192C PRM15Q03262 622 aa3.86□□□□□ -1.79
NUP42YDR192C SDC1Q03323 175 aa3.86□□□□□ -1.79
NUP42YDR192C YLR283WQ05867 314 aa3.86□□□□□ -1.79
NUP42YDR192C HRT1Q08273 121 aa3.86□□□□□ -1.79
NUP42YDR192C RDI1Q12434 202 aa3.86□□□□□ -1.79
NUP42YDR192C UTP20P35194 2493 aaKnown RBP3.86□□□□□ -1.79
NUP42YDR192C YBR056W-AI2HB52 66 aa3.85□□□□□ -1.79
NUP42YDR192C KIN28P06242 306 aa3.85□□□□□ -1.79
NUP42YDR192C HMX1P32339 317 aa3.85□□□□□ -1.79
NUP42YDR192C TOA2P32774 122 aa3.85□□□□□ -1.79
NUP42YDR192C CLG1P35190 452 aa3.85□□□□□ -1.79
NUP42YDR192C GEP4P38812 185 aa3.85□□□□□ -1.79
NUP42YDR192C RPL13BP40212 199 aaKnown RBP3.85□□□□□ -1.79
NUP42YDR192C AVT7P40501 490 aa3.85□□□□□ -1.79
NUP42YDR192C YKE4P40544 346 aa3.85□□□□□ -1.79
NUP42YDR192C HAC1P41546 238 aa3.85□□□□□ -1.79
NUP42YDR192C GNA1P43577 159 aaPredicted RBP3.85□□□□□ -1.79
NUP42YDR192C ECO1P43605 281 aa3.85□□□□□ -1.79
NUP42YDR192C ERJ5P43613 295 aaPredicted RBP3.85□□□□□ -1.79
NUP42YDR192C PGU1P47180 361 aa3.85□□□□□ -1.79
NUP42YDR192C BRR6P53062 197 aa3.85□□□□□ -1.79
NUP42YDR192C MRPS16Q02608 121 aa3.85□□□□□ -1.79
NUP42YDR192C UTP15Q04305 513 aaKnown RBP3.85□□□□□ -1.79
NUP42YDR192C SCW10Q04951 389 aa3.85□□□□□ -1.79
NUP42YDR192C CTS2Q06350 511 aa3.85□□□□□ -1.79
NUP42YDR192C RPL13AQ12690 199 aaPredicted RBP3.85□□□□□ -1.79
NUP42YDR192C TDH3P00359 332 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
NUP42YDR192C CBP6P07253 162 aaPredicted RBP3.84□□□□□ -1.79
NUP42YDR192C NHP6BP11633 99 aaKnown RBP3.84□□□□□ -1.79
NUP42YDR192C MSI1P13712 422 aa3.84□□□□□ -1.79
NUP42YDR192C URA6P15700 204 aa3.84□□□□□ -1.79
NUP42YDR192C HXT2P23585 541 aa3.84□□□□□ -1.79
NUP42YDR192C SCO1P23833 295 aa3.84□□□□□ -1.79
NUP42YDR192C YCR101CP25607 182 aa3.84□□□□□ -1.79
NUP42YDR192C DAL80P26343 269 aa3.84□□□□□ -1.79
NUP42YDR192C HTD2P38790 280 aaKnown RBP3.84□□□□□ -1.79
NUP42YDR192C TIR3P40552 269 aa3.84□□□□□ -1.79
NUP42YDR192C LCB3P47013 409 aa3.84□□□□□ -1.79
NUP42YDR192C VHT1P53241 593 aa3.84□□□□□ -1.79
NUP42YDR192C RSM27P53305 110 aa3.84□□□□□ -1.79
NUP42YDR192C AAH1P53909 347 aa3.84□□□□□ -1.79
NUP42YDR192C PLP1Q04004 230 aa3.84□□□□□ -1.79
NUP42YDR192C MIX14Q04341 121 aa3.84□□□□□ -1.79
NUP42YDR192C YMR252CQ04814 134 aa3.84□□□□□ -1.79
NUP42YDR192C SEI1Q06058 285 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms