RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 NRK1P53915 240 aa2.02□□□□□ -2.09
snR43snR43 LIP2Q06005 328 aa2.02□□□□□ -2.09
snR43snR43 YLR126CQ12288 251 aa2.02□□□□□ -2.09
snR43snR43 MPD1Q12404 318 aaKnown RBP2.02□□□□□ -2.09
snR43snR43 CDC28P00546 298 aaKnown RBP2.01□□□□□ -2.09
snR43snR43 FBA1P14540 359 aaKnown RBP2.01□□□□□ -2.09
snR43snR43 ATG22P25568 528 aa2.01□□□□□ -2.09
snR43snR43 RPL5P26321 297 aaKnown RBP2.01□□□□□ -2.09
snR43snR43 IMP1P28627 190 aa2.01□□□□□ -2.09
snR43snR43 ZUO1P32527 433 aaKnown RBP2.01□□□□□ -2.09
snR43snR43 UTR5P32630 166 aa2.01□□□□□ -2.09
snR43snR43 NAT2P37293 288 aa2.01□□□□□ -2.09
snR43snR43 SDH4P37298 181 aa2.01□□□□□ -2.09
snR43snR43 PRS4P38063 326 aaPredicted RBP2.01□□□□□ -2.09
snR43snR43 YND1P40009 630 aa2.01□□□□□ -2.09
snR43snR43 RIO2P40160 425 aaKnown RBP2.01□□□□□ -2.09
snR43snR43 TIR3P40552 269 aa2.01□□□□□ -2.09
snR43snR43 RPS0BP46654 252 aaKnown RBP2.01□□□□□ -2.09
snR43snR43 TMA22P47089 198 aaPredicted RBP2.01□□□□□ -2.09
snR43snR43 TTI2P47168 421 aa2.01□□□□□ -2.09
snR43snR43 RMR1P53060 241 aa2.01□□□□□ -2.09
snR43snR43 SAY1P53324 424 aa2.01□□□□□ -2.09
snR43snR43 YLR152CP54072 576 aa2.01□□□□□ -2.09
snR43snR43 RPL21AQ02753 160 aaKnown RBP2.01□□□□□ -2.09
snR43snR43 YDR239CQ03780 787 aa2.01□□□□□ -2.09
snR43snR43 UPS1Q05776 175 aa2.01□□□□□ -2.09
snR43snR43 YLR281CQ05863 155 aa2.01□□□□□ -2.09
snR43snR43 MRX9Q07349 420 aaKnown RBP2.01□□□□□ -2.09
snR43snR43 PCL9Q12477 304 aa2.01□□□□□ -2.09
snR43snR43 RPL21BQ12672 160 aaKnown RBP2.01□□□□□ -2.09
snR43snR43 ADF1Q2V2Q1 113 aa2.01□□□□□ -2.09
snR43snR43 RNA14P25298 677 aaKnown RBP2□□□□□ -2.09
snR43snR43 OAC1P32332 324 aa2□□□□□ -2.09
snR43snR43 DPH5P32469 300 aaPredicted RBP2□□□□□ -2.09
snR43snR43 DOA4P32571 926 aa2□□□□□ -2.09
snR43snR43 YRA2P36036 203 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
snR43snR43 MRPL36P36531 177 aa2□□□□□ -2.09
snR43snR43 PDX3P38075 228 aaKnown RBP2□□□□□ -2.09
snR43snR43 SOP4P39543 234 aaPredicted RBP2□□□□□ -2.09
snR43snR43 DLS1P40366 167 aa2□□□□□ -2.09
snR43snR43 YIL024CP40543 189 aa2□□□□□ -2.09
snR43snR43 ERJ5P43613 295 aaPredicted RBP2□□□□□ -2.09
snR43snR43 MRX5P47007 382 aa2□□□□□ -2.09
snR43snR43 VPS55P47111 140 aa2□□□□□ -2.09
snR43snR43 SSN8P47821 323 aa2□□□□□ -2.09
snR43snR43 VOA1P53262 265 aa2□□□□□ -2.09
snR43snR43 YNL234WP53857 426 aa2□□□□□ -2.09
snR43snR43 COG5P53951 403 aa2□□□□□ -2.09
snR43snR43 YMR087WQ04299 284 aa2□□□□□ -2.09
snR43snR43 YMR315WQ04869 349 aaKnown RBP2□□□□□ -2.09
snR43snR43 SCW10Q04951 389 aa2□□□□□ -2.09
snR43snR43 HOR7Q05827 59 aa2□□□□□ -2.09
snR43snR43 VIK1Q12045 647 aa2□□□□□ -2.09
snR43snR43 FCY1Q12178 158 aa2□□□□□ -2.09
snR43snR43 RFM1Q12192 310 aa2□□□□□ -2.09
snR43snR43 CRC1Q12289 327 aa2□□□□□ -2.09
snR43snR43 PST2Q12335 198 aaKnown RBP2□□□□□ -2.09
snR43snR43 ATO3Q12359 275 aa2□□□□□ -2.09
snR43snR43 RPL25P04456 142 aaKnown RBP1.99□□□□□ -2.09
snR43snR43 KIN28P06242 306 aa1.99□□□□□ -2.09
snR43snR43 COX9P07255 59 aa1.99□□□□□ -2.09
snR43snR43 MATALPHA1P0CY06 175 aa1.99□□□□□ -2.09
snR43snR43 HMLALPHA1P0CY07 175 aa1.99□□□□□ -2.09
snR43snR43 SNF4P12904 322 aa1.99□□□□□ -2.09
snR43snR43 LAC1P28496 418 aa1.99□□□□□ -2.09
snR43snR43 PEX4P29340 183 aa1.99□□□□□ -2.09
snR43snR43 VMA6P32366 345 aaKnown RBP1.99□□□□□ -2.09
snR43snR43 SPS18P32572 300 aa1.99□□□□□ -2.09
snR43snR43 PMU1P36069 295 aa1.99□□□□□ -2.09
snR43snR43 SSH1P38353 490 aaKnown RBP1.99□□□□□ -2.09
snR43snR43 PRS2P38620 318 aaKnown RBP1.99□□□□□ -2.09
snR43snR43 CCS1P40202 249 aaKnown RBP1.99□□□□□ -2.09
snR43snR43 YJL118WP47022 219 aa1.99□□□□□ -2.09
snR43snR43 GLO1P50107 326 aa1.99□□□□□ -2.09
snR43snR43 YGL204CP53089 101 aa1.99□□□□□ -2.09
snR43snR43 RSM27P53305 110 aa1.99□□□□□ -2.09
snR43snR43 HSK3P69852 69 aa1.99□□□□□ -2.09
snR43snR43 HOT1Q03213 719 aa1.99□□□□□ -2.09
snR43snR43 YHP1Q04116 353 aa1.99□□□□□ -2.09
snR43snR43 SPC24Q04477 213 aa1.99□□□□□ -2.09
snR43snR43 ARP10Q04549 284 aa1.99□□□□□ -2.09
snR43snR43 YMR226CQ05016 267 aaKnown RBP1.99□□□□□ -2.09
snR43snR43 TSR2Q06672 205 aaKnown RBP1.99□□□□□ -2.09
snR43snR43 LUC7Q07508 261 aaPredicted RBP1.99□□□□□ -2.09
snR43snR43 PRM3Q08931 133 aa1.99□□□□□ -2.09
snR43snR43 LYS21Q12122 440 aaKnown RBP1.99□□□□□ -2.09
snR43snR43 EAF3Q12432 401 aa1.99□□□□□ -2.09
snR43snR43 HUT1Q12520 339 aa1.99□□□□□ -2.09
snR43snR43 YPL119C-AQ3E751 87 aa1.99□□□□□ -2.09
snR43snR43 VCX1Q99385 411 aa1.99□□□□□ -2.09
snR43snR43 TDH1P00360 332 aaKnown RBP1.98□□□□□ -2.09
snR43snR43 ADK1P07170 222 aaKnown RBP1.98□□□□□ -2.09
snR43snR43 YGL041W-AP0C5N3 154 aa1.98□□□□□ -2.09
snR43snR43 OLE1P21147 510 aaKnown RBP1.98□□□□□ -2.09
snR43snR43 DPB2P24482 689 aaPredicted RBP1.98□□□□□ -2.09
snR43snR43 COQ3P27680 312 aa1.98□□□□□ -2.09
snR43snR43 UBC8P28263 218 aa1.98□□□□□ -2.09
snR43snR43 NDC1P32500 655 aa1.98□□□□□ -2.09
snR43snR43 SDS24P38314 527 aa1.98□□□□□ -2.09
snR43snR43 NOP16P40007 231 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms