RNA–Protein interactions for RNA: snR34

snR34, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR34, Length 203 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR34snR34 ERV29P53337 310 aa2.52□□□□□ -2.01
snR34snR34 YLR283WQ05867 314 aa2.52□□□□□ -2.01
snR34snR34 USB1Q12208 290 aaKnown RBP2.52□□□□□ -2.01
snR34snR34 CDC10P25342 322 aaKnown RBP2.51□□□□□ -2.01
snR34snR34 PRM10P42946 383 aa2.51□□□□□ -2.01
snR34snR34 NSA1P53136 463 aaPredicted RBP2.51□□□□□ -2.01
snR34snR34 ABF2Q02486 183 aa2.51□□□□□ -2.01
snR34snR34 CDC7P06243 507 aa2.5□□□□□ -2.01
snR34snR34 NTF2P33331 125 aaKnown RBP2.5□□□□□ -2.01
snR34snR34 VTC1P40046 129 aaRIP-Chip data2.5□□□□□ -2.01not detected
snR34snR34 TOS8P53147 276 aa2.5□□□□□ -2.01
snR34snR34 CDC8P00572 216 aa2.49□□□□□ -2.01
snR34snR34 BCY1P07278 416 aaKnown RBP2.49□□□□□ -2.01
snR34snR34 DDI2P0CH63 225 aa2.49□□□□□ -2.01
snR34snR34 DDI3P0CH64 225 aa2.49□□□□□ -2.01
snR34snR34 VPS21P36017 210 aaKnown RBP2.49□□□□□ -2.01
snR34snR34 DSE2P38844 325 aa2.49□□□□□ -2.01
snR34snR34 RSM25P40496 264 aa2.49□□□□□ -2.01
snR34snR34 TPO4Q12256 659 aa2.49□□□□□ -2.01
snR34snR34 YPR170W-BP0C5R9 85 aa2.48□□□□□ -2.01
snR34snR34 MDH2P22133 377 aa2.48□□□□□ -2.01
snR34snR34 RPC17P47076 161 aa2.48□□□□□ -2.01
snR34snR34 LIA1P47120 325 aaKnown RBP2.48□□□□□ -2.01
snR34snR34 NOP13P53883 403 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
snR34snR34 YMD8Q03697 442 aa2.47□□□□□ -2.01
snR34snR34 SPT3P06844 337 aa2.45□□□□□ -2.02
snR34snR34 PET9P18239 318 aaKnown RBP2.45□□□□□ -2.02
snR34snR34 COX15P40086 486 aa2.45□□□□□ -2.02
snR34snR34 AGE2P40529 298 aa2.45□□□□□ -2.02
snR34snR34 RPL33BP41056 107 aaKnown RBP2.45□□□□□ -2.02
snR34snR34 YNR062CP53748 327 aa2.45□□□□□ -2.02
snR34snR34 YML108WQ03759 105 aa2.45□□□□□ -2.02
snR34snR34 TRM12Q04235 462 aa2.45□□□□□ -2.02
snR34snR34 DCN1Q12395 269 aa2.45□□□□□ -2.02
snR34snR34 RHO1P06780 209 aaKnown RBP2.44□□□□□ -2.02
snR34snR34 YER085CP40058 173 aa2.44□□□□□ -2.02
snR34snR34 PSF1Q12488 208 aa2.44□□□□□ -2.02
snR34snR34 LSO2Q3E772 92 aaKnown RBP2.44□□□□□ -2.02
snR34snR34 DRS2P39524 1355 aa2.44□□□□□ -2.02
snR34snR34 DOG2P38773 246 aa2.43□□□□□ -2.02
snR34snR34 SVP26P38869 228 aa2.43□□□□□ -2.02
snR34snR34 IRC22P40006 225 aa2.43□□□□□ -2.02
snR34snR34 YNL010WP53981 241 aaKnown RBP2.43□□□□□ -2.02
snR34snR34 SPG3Q04398 127 aaPredicted RBP2.43□□□□□ -2.02
snR34snR34 URA6P15700 204 aa2.42□□□□□ -2.02
snR34snR34 MEI4P29467 408 aa2.42□□□□□ -2.02
snR34snR34 AVT2P39981 480 aa2.42□□□□□ -2.02
snR34snR34 YER135CP40082 130 aa2.42□□□□□ -2.02
snR34snR34 PRE6P40303 254 aaKnown RBP2.42□□□□□ -2.02
snR34snR34 AIF1P52923 378 aa2.42□□□□□ -2.02
snR34snR34 DID2P69771 204 aa2.42□□□□□ -2.02
snR34snR34 CDC123Q05791 360 aa2.42□□□□□ -2.02
snR34snR34 YOL162WP0CF19 215 aa2.41□□□□□ -2.02
snR34snR34 SRY1P36007 326 aa2.41□□□□□ -2.02
snR34snR34 PGD1P40356 397 aa2.41□□□□□ -2.02
snR34snR34 LPP1Q04396 274 aa2.41□□□□□ -2.02
snR34snR34 ATG22P25568 528 aa2.4□□□□□ -2.03
snR34snR34 VMA6P32366 345 aaKnown RBP2.4□□□□□ -2.03
snR34snR34 YBR219CP38317 127 aa2.4□□□□□ -2.03
snR34snR34 MIC12P38341 106 aa2.4□□□□□ -2.03
snR34snR34 MIC26P50087 233 aa2.4□□□□□ -2.03
snR34snR34 FYV6P53913 173 aa2.4□□□□□ -2.03
snR34snR34 BUD25P85052 153 aa2.4□□□□□ -2.03
snR34snR34 SML1Q04964 104 aa2.4□□□□□ -2.03
snR34snR34 REP2P03872 296 aa2.39□□□□□ -2.03
snR34snR34 RPL24BP24000 155 aaKnown RBP2.39□□□□□ -2.03
snR34snR34 SSO1P32867 290 aa2.39□□□□□ -2.03
snR34snR34 YKR045CP36138 183 aa2.39□□□□□ -2.03
snR34snR34 ICE2P40499 491 aa2.39□□□□□ -2.03
snR34snR34 THP2O13539 261 aaKnown RBP2.38□□□□□ -2.03
snR34snR34 CDC28P00546 298 aaKnown RBP2.38□□□□□ -2.03
snR34snR34 URA8P38627 578 aaPredicted RBP2.38□□□□□ -2.03
snR34snR34 TIR3P40552 269 aa2.38□□□□□ -2.03
snR34snR34 PRM8P53174 237 aa2.38□□□□□ -2.03
snR34snR34 ALG13P53178 202 aa2.38□□□□□ -2.03
snR34snR34 YMR31P19955 123 aa2.37□□□□□ -2.03
snR34snR34 POP4P38336 279 aa2.37□□□□□ -2.03
snR34snR34 RTR1P40084 226 aaPredicted RBP2.37□□□□□ -2.03
snR34snR34 BRR6P53062 197 aa2.37□□□□□ -2.03
snR34snR34 BOL2P53082 120 aa2.37□□□□□ -2.03
snR34snR34 SNZ1Q03148 297 aa2.37□□□□□ -2.03
snR34snR34 PPA2P28239 310 aa2.36□□□□□ -2.03
snR34snR34 BMH2P34730 273 aaKnown RBP2.36□□□□□ -2.03
snR34snR34 YDR248CQ03786 193 aa2.36□□□□□ -2.03
snR34snR34 FLO9P39712 1322 aa2.36□□□□□ -2.03
snR34snR34 RPL27BP0C2H7 136 aaKnown RBP2.35□□□□□ -2.03
snR34snR34 YLR156WP0CE96 114 aa2.35□□□□□ -2.03
snR34snR34 YLR159WP0CE97 114 aa2.35□□□□□ -2.03
snR34snR34 YLR161WP0CE98 114 aa2.35□□□□□ -2.03
snR34snR34 MRPS28P21771 286 aa2.35□□□□□ -2.03
snR34snR34 DBF2P22204 572 aa2.35□□□□□ -2.03
snR34snR34 RPL28P02406 149 aaKnown RBP2.34□□□□□ -2.03
snR34snR34 RTC3P38804 111 aaPredicted RBP2.34□□□□□ -2.03
snR34snR34 BXI1P48558 297 aa2.34□□□□□ -2.03
snR34snR34 SEY1Q99287 776 aa2.34□□□□□ -2.03
snR34snR34 UBR2Q07963 1872 aa2.34□□□□□ -2.03
snR34snR34 YGL010WP25338 174 aa2.33□□□□□ -2.04
snR34snR34 FZF1P32805 299 aa2.33□□□□□ -2.04
snR34snR34 APS1P35181 156 aa2.33□□□□□ -2.04
snR34snR34 YNL217WP40152 326 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms