RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W YBR298C-AQ8TGK4 73 aa3.27□□□□□ -1.89
ROD1YOR018W QCR7P00128 127 aa3.26□□□□□ -1.89
ROD1YOR018W RPL39P04650 51 aa3.26□□□□□ -1.89
ROD1YOR018W PHO2P07269 559 aa3.26□□□□□ -1.89
ROD1YOR018W KRE6P32486 720 aa3.26□□□□□ -1.89
ROD1YOR018W PAN3P36102 679 aaPredicted RBP3.26□□□□□ -1.89
ROD1YOR018W CTR2P38865 189 aa3.26□□□□□ -1.89
ROD1YOR018W GPI16P38875 610 aa3.26□□□□□ -1.89
ROD1YOR018W UBP8P50102 471 aa3.26□□□□□ -1.89
ROD1YOR018W MRPL19P53875 158 aa3.26□□□□□ -1.89
ROD1YOR018W SKO1Q02100 647 aa3.26□□□□□ -1.89
ROD1YOR018W RSM28Q03430 361 aa3.26□□□□□ -1.89
ROD1YOR018W FRE3Q08905 711 aa3.26□□□□□ -1.89
ROD1YOR018W MPD1Q12404 318 aaKnown RBP3.26□□□□□ -1.89
ROD1YOR018W RRI1Q12468 440 aa3.26□□□□□ -1.89
ROD1YOR018W URA2P07259 2214 aaKnown RBP3.26□□□□□ -1.89
ROD1YOR018W GCN3P14741 305 aa3.26□□□□□ -1.89
ROD1YOR018W CKS1P20486 150 aaKnown RBP3.26□□□□□ -1.89
ROD1YOR018W FMT1P32785 401 aa3.26□□□□□ -1.89
ROD1YOR018W CLB6P32943 380 aa3.26□□□□□ -1.89
ROD1YOR018W YKL187CP34231 750 aa3.26□□□□□ -1.89
ROD1YOR018W POP8P38208 133 aa3.26□□□□□ -1.89
ROD1YOR018W CDS1P38221 457 aa3.26□□□□□ -1.89
ROD1YOR018W PTI1P39927 425 aaPredicted RBP3.26□□□□□ -1.89
ROD1YOR018W BUL1P48524 976 aa3.26□□□□□ -1.89
ROD1YOR018W YIP5P53108 310 aa3.26□□□□□ -1.89
ROD1YOR018W YMR279CQ03263 540 aa3.26□□□□□ -1.89
ROD1YOR018W TSA2Q04120 196 aa3.26□□□□□ -1.89
ROD1YOR018W CAC2Q04199 468 aa3.26□□□□□ -1.89
ROD1YOR018W MED7Q08278 222 aa3.26□□□□□ -1.89
ROD1YOR018W YJR112W-AQ3E743 109 aa3.26□□□□□ -1.89
ROD1YOR018W YLR358CO13565 187 aa3.25□□□□□ -1.89
ROD1YOR018W RPL35AP0CX84 120 aaKnown RBP3.25□□□□□ -1.89
ROD1YOR018W RPL35BP0CX85 120 aaKnown RBP3.25□□□□□ -1.89
ROD1YOR018W SEN2P16658 377 aa3.25□□□□□ -1.89
ROD1YOR018W TIP1P27654 210 aaPredicted RBP3.25□□□□□ -1.89
ROD1YOR018W REC114P32841 428 aa3.25□□□□□ -1.89
ROD1YOR018W SWD3P38123 315 aa3.25□□□□□ -1.89
ROD1YOR018W ECM14P38836 430 aa3.25□□□□□ -1.89
ROD1YOR018W YER137CP40083 148 aaKnown RBP3.25□□□□□ -1.89
ROD1YOR018W GAT2P40209 560 aa3.25□□□□□ -1.89
ROD1YOR018W AVT7P40501 490 aa3.25□□□□□ -1.89
ROD1YOR018W YFL015CP43578 164 aa3.25□□□□□ -1.89
ROD1YOR018W YDL183CP48569 320 aa3.25□□□□□ -1.89
ROD1YOR018W RSM27P53305 110 aa3.25□□□□□ -1.89
ROD1YOR018W CWC25P53854 179 aaKnown RBP3.25□□□□□ -1.89
ROD1YOR018W YML018CQ03730 393 aa3.25□□□□□ -1.89
ROD1YOR018W HNT1Q04344 158 aaKnown RBP3.25□□□□□ -1.89
ROD1YOR018W YOR186WQ08560 144 aa3.25□□□□□ -1.89
ROD1YOR018W CHO1P08456 276 aa3.25□□□□□ -1.89
ROD1YOR018W PET122P10355 254 aa3.25□□□□□ -1.89
ROD1YOR018W NHP6BP11633 99 aaKnown RBP3.25□□□□□ -1.89
ROD1YOR018W IMP1P28627 190 aa3.25□□□□□ -1.89
ROD1YOR018W MRPL27P36526 146 aaPredicted RBP3.25□□□□□ -1.89
ROD1YOR018W MRPL36P36531 177 aa3.25□□□□□ -1.89
ROD1YOR018W YHL037CP38733 133 aa3.25□□□□□ -1.89
ROD1YOR018W SMB1P40018 196 aaKnown RBP3.25□□□□□ -1.89
ROD1YOR018W GET2P40056 285 aa3.25□□□□□ -1.89
ROD1YOR018W PIG2P40187 538 aa3.25□□□□□ -1.89
ROD1YOR018W YGR210CP42942 411 aa3.25□□□□□ -1.89
ROD1YOR018W GWT1P47026 490 aa3.25□□□□□ -1.89
ROD1YOR018W YHC3P47040 408 aa3.25□□□□□ -1.89
ROD1YOR018W YJR111CP47148 283 aaKnown RBP3.25□□□□□ -1.89
ROD1YOR018W YNR048WP53740 393 aa3.25□□□□□ -1.89
ROD1YOR018W YNL092WP53934 400 aa3.25□□□□□ -1.89
ROD1YOR018W CRZ1P53968 678 aa3.25□□□□□ -1.89
ROD1YOR018W SED1Q01589 338 aa3.25□□□□□ -1.89
ROD1YOR018W SCM3Q12334 223 aa3.25□□□□□ -1.89
ROD1YOR018W YLR415CO13578 112 aa3.24□□□□□ -1.89
ROD1YOR018W TPI1P00942 248 aaKnown RBP3.24□□□□□ -1.89
ROD1YOR018W AAC1P04710 309 aa3.24□□□□□ -1.89
ROD1YOR018W ERG3P32353 365 aa3.24□□□□□ -1.89
ROD1YOR018W MTR2P34232 184 aaKnown RBP3.24□□□□□ -1.89
ROD1YOR018W ARO9P38840 513 aaPredicted RBP3.24□□□□□ -1.89
ROD1YOR018W GON7P46984 123 aa3.24□□□□□ -1.89
ROD1YOR018W BNA1P47096 177 aa3.24□□□□□ -1.89
ROD1YOR018W MRPL22P53881 309 aa3.24□□□□□ -1.89
ROD1YOR018W DIG2Q03373 323 aaKnown RBP3.24□□□□□ -1.89
ROD1YOR018W PLP1Q04004 230 aa3.24□□□□□ -1.89
ROD1YOR018W YPR098CQ06089 161 aa3.24□□□□□ -1.89
ROD1YOR018W LUC7Q07508 261 aaPredicted RBP3.24□□□□□ -1.89
ROD1YOR018W TMC1Q08422 150 aaPredicted RBP3.24□□□□□ -1.89
ROD1YOR018W SRL2Q12020 392 aa3.24□□□□□ -1.89
ROD1YOR018W COX17Q12287 69 aa3.24□□□□□ -1.89
ROD1YOR018W RPL25P04456 142 aaKnown RBP3.24□□□□□ -1.89
ROD1YOR018W CDC23P16522 626 aa3.24□□□□□ -1.89
ROD1YOR018W OCH1P31755 480 aa3.24□□□□□ -1.89
ROD1YOR018W SUA5P32579 426 aa3.24□□□□□ -1.89
ROD1YOR018W MNS1P32906 549 aa3.24□□□□□ -1.89
ROD1YOR018W SRY1P36007 326 aa3.24□□□□□ -1.89
ROD1YOR018W SWD2P36104 329 aaPredicted RBP3.24□□□□□ -1.89
ROD1YOR018W YBR220CP38318 560 aa3.24□□□□□ -1.89
ROD1YOR018W CUE1P38428 203 aa3.24□□□□□ -1.89
ROD1YOR018W COS8P38723 381 aa3.24□□□□□ -1.89
ROD1YOR018W RFC2P40348 353 aa3.24□□□□□ -1.89
ROD1YOR018W YJR011CP47086 261 aaPredicted RBP3.24□□□□□ -1.89
ROD1YOR018W YGL262WP53054 175 aa3.24□□□□□ -1.89
ROD1YOR018W MRPS16Q02608 121 aa3.24□□□□□ -1.89
ROD1YOR018W PRM15Q03262 622 aa3.24□□□□□ -1.89
ROD1YOR018W YDR248CQ03786 193 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms