RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W FMC1P40491 155 aa1.32□□□□□ -2.2
RRI2YOL117W ILM1P47155 203 aa1.32□□□□□ -2.2
RRI2YOL117W NUP84P52891 726 aa1.32□□□□□ -2.2
RRI2YOL117W MRPL50P53724 139 aa1.32□□□□□ -2.2
RRI2YOL117W ABF2Q02486 183 aa1.32□□□□□ -2.2
RRI2YOL117W YLR283WQ05867 314 aa1.32□□□□□ -2.2
RRI2YOL117W RIB1P38066 345 aa1.32□□□□□ -2.2
RRI2YOL117W LDB7P38210 180 aa1.32□□□□□ -2.2
RRI2YOL117W IRC22P40006 225 aa1.32□□□□□ -2.2
RRI2YOL117W GLE2P40066 365 aa1.32□□□□□ -2.2
RRI2YOL117W YIL001WP40560 513 aa1.32□□□□□ -2.2
RRI2YOL117W ERV29P53337 310 aa1.32□□□□□ -2.2
RRI2YOL117W YNL010WP53981 241 aaKnown RBP1.32□□□□□ -2.2
RRI2YOL117W TRM12Q04235 462 aa1.32□□□□□ -2.2
RRI2YOL117W MED4Q12343 284 aa1.32□□□□□ -2.2
RRI2YOL117W CYR1P08678 2026 aaKnown RBP1.32□□□□□ -2.2
RRI2YOL117W SRB4P32569 687 aa1.31□□□□□ -2.2
RRI2YOL117W RPC17P47076 161 aa1.31□□□□□ -2.2
RRI2YOL117W YML096WQ04489 525 aa1.31□□□□□ -2.2
RRI2YOL117W CDC8P00572 216 aa1.3□□□□□ -2.2
RRI2YOL117W SPT3P06844 337 aa1.3□□□□□ -2.2
RRI2YOL117W BCY1P07278 416 aaKnown RBP1.3□□□□□ -2.2
RRI2YOL117W SRY1P36007 326 aa1.3□□□□□ -2.2
RRI2YOL117W AGE2P40529 298 aa1.3□□□□□ -2.2
RRI2YOL117W TRM9P49957 279 aa1.3□□□□□ -2.2
RRI2YOL117W BUD25P85052 153 aa1.3□□□□□ -2.2
RRI2YOL117W RRN5Q02983 363 aa1.3□□□□□ -2.2
RRI2YOL117W REP2P03872 296 aa1.3□□□□□ -2.2
RRI2YOL117W MRPL25P23369 157 aa1.3□□□□□ -2.2
RRI2YOL117W YGL010WP25338 174 aa1.3□□□□□ -2.2
RRI2YOL117W YBR219CP38317 127 aa1.3□□□□□ -2.2
RRI2YOL117W YBR220CP38318 560 aa1.3□□□□□ -2.2
RRI2YOL117W SPG3Q04398 127 aaPredicted RBP1.3□□□□□ -2.2
RRI2YOL117W SML1Q04964 104 aa1.3□□□□□ -2.2
RRI2YOL117W CSI2Q08054 341 aa1.3□□□□□ -2.2
RRI2YOL117W YOL162WP0CF19 215 aa1.29□□□□□ -2.2
RRI2YOL117W ICE2P40499 491 aa1.29□□□□□ -2.2
RRI2YOL117W TIR3P40552 269 aa1.29□□□□□ -2.2
RRI2YOL117W BOL2P53082 120 aa1.29□□□□□ -2.2
RRI2YOL117W YLR162WQ06235 118 aa1.29□□□□□ -2.2
RRI2YOL117W VTC1P40046 129 aaRIP-Chip data1.28□□□□□ -2.2not detected
RRI2YOL117W RPL33BP41056 107 aaKnown RBP1.28□□□□□ -2.2
RRI2YOL117W PET117Q02771 107 aa1.28□□□□□ -2.2
RRI2YOL117W SSQ1Q05931 657 aaPredicted RBP1.28□□□□□ -2.2
RRI2YOL117W MATALPHA1P0CY06 175 aa1.28□□□□□ -2.2
RRI2YOL117W HMLALPHA1P0CY07 175 aa1.28□□□□□ -2.2
RRI2YOL117W CDC10P25342 322 aaKnown RBP1.28□□□□□ -2.2
RRI2YOL117W YKR045CP36138 183 aa1.28□□□□□ -2.2
RRI2YOL117W CUE1P38428 203 aa1.28□□□□□ -2.2
RRI2YOL117W URA8P38627 578 aaPredicted RBP1.28□□□□□ -2.2
RRI2YOL117W RPL27BP0C2H7 136 aaKnown RBP1.27□□□□□ -2.21
RRI2YOL117W RPL2AP0CX45 254 aaKnown RBP1.27□□□□□ -2.21
RRI2YOL117W RPL2BP0CX46 254 aaKnown RBP1.27□□□□□ -2.21
RRI2YOL117W UPS2P35200 230 aa1.27□□□□□ -2.21
RRI2YOL117W YRB2P40517 327 aa1.27□□□□□ -2.21
RRI2YOL117W DOC1P53068 250 aa1.27□□□□□ -2.21
RRI2YOL117W NOP13P53883 403 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
RRI2YOL117W NUP49Q02199 472 aa1.27□□□□□ -2.21
RRI2YOL117W UBR2Q07963 1872 aa1.27□□□□□ -2.21
RRI2YOL117W PGD1P40356 397 aa1.27□□□□□ -2.21
RRI2YOL117W LIA1P47120 325 aaKnown RBP1.27□□□□□ -2.21
RRI2YOL117W LPP1Q04396 274 aa1.27□□□□□ -2.21
RRI2YOL117W YCR016WP25617 290 aaKnown RBP1.26□□□□□ -2.21
RRI2YOL117W YPR170W-BP0C5R9 85 aa1.25□□□□□ -2.21
RRI2YOL117W DOG2P38773 246 aa1.25□□□□□ -2.21
RRI2YOL117W AIF1P52923 378 aa1.25□□□□□ -2.21
RRI2YOL117W NSA1P53136 463 aaPredicted RBP1.25□□□□□ -2.21
RRI2YOL117W MZM1Q03429 123 aaPredicted RBP1.25□□□□□ -2.21
RRI2YOL117W YML108WQ03759 105 aa1.25□□□□□ -2.21
RRI2YOL117W LSO2Q3E772 92 aaKnown RBP1.25□□□□□ -2.21
RRI2YOL117W URA6P15700 204 aa1.25□□□□□ -2.21
RRI2YOL117W YER085CP40058 173 aa1.25□□□□□ -2.21
RRI2YOL117W MIC26P50087 233 aa1.25□□□□□ -2.21
RRI2YOL117W CFT1Q06632 1357 aaKnown RBP1.24□□□□□ -2.21
RRI2YOL117W YLR156WP0CE96 114 aa1.24□□□□□ -2.21
RRI2YOL117W YLR159WP0CE97 114 aa1.24□□□□□ -2.21
RRI2YOL117W YLR161WP0CE98 114 aa1.24□□□□□ -2.21
RRI2YOL117W YNL217WP40152 326 aa1.24□□□□□ -2.21
RRI2YOL117W RPL13BP40212 199 aaKnown RBP1.24□□□□□ -2.21
RRI2YOL117W YMD8Q03697 442 aa1.24□□□□□ -2.21
RRI2YOL117W RPL13AQ12690 199 aaPredicted RBP1.24□□□□□ -2.21
RRI2YOL117W SEC17P32602 292 aa1.23□□□□□ -2.21
RRI2YOL117W FZF1P32805 299 aa1.23□□□□□ -2.21
RRI2YOL117W PRE6P40303 254 aaKnown RBP1.23□□□□□ -2.21
RRI2YOL117W FLO9P39712 1322 aa1.23□□□□□ -2.21
RRI2YOL117W FPR1P20081 114 aaKnown RBP1.23□□□□□ -2.21
RRI2YOL117W TCA17P32613 152 aa1.23□□□□□ -2.21
RRI2YOL117W MSN4P33749 630 aa1.23□□□□□ -2.21
RRI2YOL117W POP4P38336 279 aa1.23□□□□□ -2.21
RRI2YOL117W GAA1P39012 614 aa1.23□□□□□ -2.21
RRI2YOL117W BRR6P53062 197 aa1.23□□□□□ -2.21
RRI2YOL117W YNR077CP53758 84 aa1.23□□□□□ -2.21
RRI2YOL117W CDC123Q05791 360 aa1.23□□□□□ -2.21
RRI2YOL117W CDC28P00546 298 aaKnown RBP1.22□□□□□ -2.21
RRI2YOL117W RHO1P06780 209 aaKnown RBP1.22□□□□□ -2.21
RRI2YOL117W MRPL17P36528 281 aa1.22□□□□□ -2.21
RRI2YOL117W SIP3P38717 1229 aa1.22□□□□□ -2.21
RRI2YOL117W ALG13P53178 202 aa1.22□□□□□ -2.21
RRI2YOL117W FYV6P53913 173 aa1.22□□□□□ -2.21
RRI2YOL117W SWP1Q02795 286 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms